RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 P01915 264 aa16.54■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 CryzP47199 331 aa16.54■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 Fabp6P51162 128 aa16.54■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 RhogP84096 191 aa16.54■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 Ccl12Q62401 104 aa16.54■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 Ell3Q80VR2 395 aa16.54■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 Cnn3Q9DAW9 330 aaKnown RBP16.54■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 Ighv1-39A0A075B5V5 117 aa16.53■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 Olfr872E9PVW2 323 aa16.53■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 Plp1P60202 277 aa16.53■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 Nup62Q63850 526 aa16.53■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 Olfr1386Q7TQT0 309 aa16.53■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 Olfr263Q7TQT8 317 aa16.53■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 Tmem11Q8BK08 190 aa16.53■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 Igfn1Q3KNY0 2849 aa16.53■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 Znf431E9QAG8 526 aa16.53■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 Gm10020E9QAZ2 204 aa16.53■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 Timp3P39876 211 aa16.53■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 Txn2P97493 166 aa16.53■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 Vmn1r195Q5SVD6 316 aa16.53■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 Rsl1Q7M6Y1 485 aa16.53■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 Smim19Q80ZU4 107 aa16.53■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 Mrpl16Q99N93 251 aa16.53■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 Necap1Q9CR95 275 aa16.53■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 Aurkaip1Q9DCJ7 200 aa16.53■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 Rhox4bQ9JI43 205 aa16.53■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 Ighv1-4A0A075B5T4 117 aa16.52■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 Gm28845A0A087WR76 214 aa16.52■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 Ighv1-77A0A0G2JGS9 117 aa16.52■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 Gm15140A2BEE3 237 aa16.52■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 Olfr748E9Q9Z0 307 aa16.52■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 Ube2g2P60605 165 aa16.52■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 1700009N14RikQ14AA6 216 aaKnown RBP16.52■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 C1qtnf9Q4ZJN1 333 aa16.52■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 Srsf12Q8C8K3 266 aa16.52■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 Klre1Q8CJC7 226 aa16.52■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 Rbmxl1Q91VM5 388 aaKnown RBP16.52■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 Vmn1r46Q9EQ45 309 aa16.52■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 Vmn1r61W4VSP5 300 aa16.52■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 BC067074F6RXI4 2391 aa16.52■□□□□ 0.23
Ccdc88a-202ENSMUST00000109477 Pde6dO55057 150 aa16.51■□□□□ 0.23
Ccdc88a-202ENSMUST00000109477 Ins2P01326 110 aa16.51■□□□□ 0.23
Ccdc88a-202ENSMUST00000109477 Adat3Q6PAT0 349 aa16.51■□□□□ 0.23
Ccdc88a-202ENSMUST00000109477 HaaoQ78JT3 286 aa16.51■□□□□ 0.23
Ccdc88a-202ENSMUST00000109477 B430305J03RikQ8BQQ8 176 aa16.51■□□□□ 0.23
Ccdc88a-202ENSMUST00000109477 Tusc5Q8C838 173 aa16.51■□□□□ 0.23
Ccdc88a-202ENSMUST00000109477 Olfr654Q8VF27 341 aa16.51■□□□□ 0.23
Ccdc88a-202ENSMUST00000109477 Q9D9C7 252 aa16.51■□□□□ 0.23
Ccdc88a-202ENSMUST00000109477 Trav9-1A0A075B601 112 aa16.5■□□□□ 0.23
Ccdc88a-202ENSMUST00000109477 P01789 122 aa16.5■□□□□ 0.23
Ccdc88a-202ENSMUST00000109477 Ypel3P61237 119 aa16.5■□□□□ 0.23
Ccdc88a-202ENSMUST00000109477 Olfr275Q7TS18 319 aa16.5■□□□□ 0.23
Ccdc88a-202ENSMUST00000109477 Slamf7Q8BHK6 333 aa16.5■□□□□ 0.23
Ccdc88a-202ENSMUST00000109477 Olfr1475Q8VEV6 314 aa16.5■□□□□ 0.23
Ccdc88a-202ENSMUST00000109477 Rasl11bQ922H7 247 aa16.5■□□□□ 0.23
Ccdc88a-202ENSMUST00000109477 Pttg1Q9CQJ7 199 aa16.5■□□□□ 0.23
Ccdc88a-202ENSMUST00000109477 Oxld1Q9CR10 201 aa16.5■□□□□ 0.23
Ccdc88a-202ENSMUST00000109477 SnapinQ9Z266 136 aa16.5■□□□□ 0.23
Ccdc88a-202ENSMUST00000109477 CicQ924A2 2510 aa16.5■□□□□ 0.23
Ccdc88a-202ENSMUST00000109477 Setd2E9Q5F9 2537 aa16.5■□□□□ 0.23
Ccdc88a-202ENSMUST00000109477 Ly6lH3BJG9 140 aa16.5■□□□□ 0.23
Ccdc88a-202ENSMUST00000109477 P0C1Z5 52 aa16.5■□□□□ 0.23
Ccdc88a-202ENSMUST00000109477 Rab19P35294 217 aa16.5■□□□□ 0.23
Ccdc88a-202ENSMUST00000109477 Pilrb2Q2YFS1 225 aa16.5■□□□□ 0.23
Ccdc88a-202ENSMUST00000109477 Rph3alQ768S4 302 aa16.5■□□□□ 0.23
Ccdc88a-202ENSMUST00000109477 Tmem167bQ80X45 74 aa16.5■□□□□ 0.23
Ccdc88a-202ENSMUST00000109477 Olfr1199Q8VF94 310 aa16.5■□□□□ 0.23
Ccdc88a-202ENSMUST00000109477 Olfr577Q8VH11 312 aa16.5■□□□□ 0.23
Ccdc88a-202ENSMUST00000109477 Mad2l1bpQ9DCX1 276 aa16.5■□□□□ 0.23
Ccdc88a-202ENSMUST00000109477 Sult1b1Q9QWG7 299 aa16.5■□□□□ 0.23
Ccdc88a-202ENSMUST00000109477 Zfp462B1AWL2 2495 aaKnown RBP16.49■□□□□ 0.23
Ccdc88a-202ENSMUST00000109477 Igkv1-131A0A140T8M8 120 aa16.49■□□□□ 0.23
Ccdc88a-202ENSMUST00000109477 Nkx2-8O70584 235 aa16.49■□□□□ 0.23
Ccdc88a-202ENSMUST00000109477 Trim63Q38HM4 350 aa16.49■□□□□ 0.23
Ccdc88a-202ENSMUST00000109477 Smim6Q3U0I6 56 aa16.49■□□□□ 0.23
Ccdc88a-202ENSMUST00000109477 SpartQ8R1X6 671 aa16.49■□□□□ 0.23
Ccdc88a-202ENSMUST00000109477 Olfr1336Q8VGH5 314 aa16.49■□□□□ 0.23
Ccdc88a-202ENSMUST00000109477 Cited2O35740 269 aa16.48■□□□□ 0.23
Ccdc88a-202ENSMUST00000109477 Gm10226O88253 85 aa16.48■□□□□ 0.23
Ccdc88a-202ENSMUST00000109477 GzmfP08883 248 aa16.48■□□□□ 0.23
Ccdc88a-202ENSMUST00000109477 Sult1a1P52840 291 aa16.48■□□□□ 0.23
Ccdc88a-202ENSMUST00000109477 Znf474Q6V5K9 347 aa16.48■□□□□ 0.23
Ccdc88a-202ENSMUST00000109477 CubnQ9JLB4 3623 aa16.48■□□□□ 0.23
Ccdc88a-202ENSMUST00000109477 Ighv1-22A0A075B5U7 117 aa16.48■□□□□ 0.23
Ccdc88a-202ENSMUST00000109477 Vmn1r232A2RTT5 351 aa16.48■□□□□ 0.23
Ccdc88a-202ENSMUST00000109477 Zfp114B2RRA8 586 aa16.48■□□□□ 0.23
Ccdc88a-202ENSMUST00000109477 Vmn1r194J3JS27 296 aa16.48■□□□□ 0.23
Ccdc88a-202ENSMUST00000109477 Gm21060J3KMU4 56 aa16.48■□□□□ 0.23
Ccdc88a-202ENSMUST00000109477 Gm5108J3QP01 101 aa16.48■□□□□ 0.23
Ccdc88a-202ENSMUST00000109477 Mtco2P00405 227 aaKnown RBP16.48■□□□□ 0.23
Ccdc88a-202ENSMUST00000109477 Olfr15P23275 312 aa16.48■□□□□ 0.23
Ccdc88a-202ENSMUST00000109477 Olfr305Q7TS02 319 aa16.48■□□□□ 0.23
Ccdc88a-202ENSMUST00000109477 Eda2rQ8BX35 297 aa16.48■□□□□ 0.23
Ccdc88a-202ENSMUST00000109477 Gm10309Q8C648 119 aa16.48■□□□□ 0.23
Ccdc88a-202ENSMUST00000109477 Olfr981Q8VEU2 310 aa16.48■□□□□ 0.23
Ccdc88a-202ENSMUST00000109477 Q9CRC3 126 aa16.48■□□□□ 0.23
Ccdc88a-202ENSMUST00000109477 Fut1O09160 376 aa16.47■□□□□ 0.23
Ccdc88a-202ENSMUST00000109477 Khdc1bP0C7A0 126 aa16.47■□□□□ 0.23
Ccdc88a-202ENSMUST00000109477 Il3raP26952 396 aa16.47■□□□□ 0.23
Ccdc88a-202ENSMUST00000109477 Gm10188Q3V432 135 aa16.47■□□□□ 0.23
Retrieved 100 of 22,080 RNA–protein pairs in 34.6 ms