RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Fam174bQ8K064 153 aa6.84□□□□□ -1.31
Trim39-201ENSMUST00000042717 Tmem189Q99LQ7 271 aa6.84□□□□□ -1.31
Trim39-201ENSMUST00000042717 Kcnip2Q9JJ69 270 aa6.84□□□□□ -1.31
Trim39-201ENSMUST00000042717 Trappc2lQ9JME7 139 aa6.84□□□□□ -1.31
Trim39-201ENSMUST00000042717 Pf4Q9Z126 105 aa6.84□□□□□ -1.31
Trim39-201ENSMUST00000042717 Scgb1b15A0A087WP50 93 aa6.84□□□□□ -1.31
Trim39-201ENSMUST00000042717 Gm21775J3KMK6 180 aa6.84□□□□□ -1.31
Trim39-201ENSMUST00000042717 Gm5108J3QP01 101 aa6.84□□□□□ -1.31
Trim39-201ENSMUST00000042717 Id3P41133 119 aa6.84□□□□□ -1.31
Trim39-201ENSMUST00000042717 RhobP62746 196 aa6.84□□□□□ -1.31
Trim39-201ENSMUST00000042717 1700009N14RikQ14AA6 216 aaKnown RBP6.84□□□□□ -1.31
Trim39-201ENSMUST00000042717 C1ql4Q4ZJM9 238 aa6.84□□□□□ -1.31
Trim39-201ENSMUST00000042717 Olfr1026Q7TR90 307 aa6.84□□□□□ -1.31
Trim39-201ENSMUST00000042717 Q9CX63 252 aa6.84□□□□□ -1.31
Trim39-201ENSMUST00000042717 Spata25Q9DA57 226 aa6.84□□□□□ -1.31
Trim39-201ENSMUST00000042717 Cnn3Q9DAW9 330 aaKnown RBP6.84□□□□□ -1.31
Trim39-201ENSMUST00000042717 PigpQ9JHG1 132 aa6.84□□□□□ -1.31
Trim39-201ENSMUST00000042717 Vsig2Q9Z109 328 aa6.84□□□□□ -1.31
Trim39-201ENSMUST00000042717 ApomQ9Z1R3 190 aa6.84□□□□□ -1.31
Trim39-201ENSMUST00000042717 RhogP84096 191 aa6.83□□□□□ -1.32
Trim39-201ENSMUST00000042717 Mlst8Q9DCJ1 326 aa6.83□□□□□ -1.32
Trim39-201ENSMUST00000042717 BC053393A0A0B4J1F6 192 aa6.83□□□□□ -1.32
Trim39-201ENSMUST00000042717 Gm10036E9PYL9 178 aaKnown RBP6.83□□□□□ -1.32
Trim39-201ENSMUST00000042717 Olfr609E9Q4X7 319 aa6.83□□□□□ -1.32
Trim39-201ENSMUST00000042717 Ins2P01326 110 aa6.83□□□□□ -1.32
Trim39-201ENSMUST00000042717 Mfge8P21956 463 aaKnown RBP6.83□□□□□ -1.32
Trim39-201ENSMUST00000042717 5730522E02RikQ5SP45 163 aa6.83□□□□□ -1.32
Trim39-201ENSMUST00000042717 Rasl11aQ6IMB1 242 aa6.83□□□□□ -1.32
Trim39-201ENSMUST00000042717 Olfr1382Q7TQT3 311 aa6.83□□□□□ -1.32
Trim39-201ENSMUST00000042717 Pef1Q8BFY6 275 aa6.83□□□□□ -1.32
Trim39-201ENSMUST00000042717 Tmem129Q8K304 362 aa6.83□□□□□ -1.32
Trim39-201ENSMUST00000042717 Olfr1412Q8VET3 321 aa6.83□□□□□ -1.32
Trim39-201ENSMUST00000042717 Olfr1336Q8VGH5 314 aa6.83□□□□□ -1.32
Trim39-201ENSMUST00000042717 Acaa1aQ921H8 424 aaKnown RBP6.83□□□□□ -1.32
Trim39-201ENSMUST00000042717 Tmem128Q9CZB9 163 aa6.83□□□□□ -1.32
Trim39-201ENSMUST00000042717 Fam210bQ9D8B6 190 aa6.83□□□□□ -1.32
Trim39-201ENSMUST00000042717 Zfp53Q9Z117 652 aa6.83□□□□□ -1.32
Trim39-201ENSMUST00000042717 Prrc2aQ7TSC1 2158 aaKnown RBP6.83□□□□□ -1.32
Trim39-201ENSMUST00000042717 Gm28845A0A087WR76 214 aa6.82□□□□□ -1.32
Trim39-201ENSMUST00000042717 Ptbp1P17225 527 aaKnown RBP6.82□□□□□ -1.32
Trim39-201ENSMUST00000042717 V1rd19Q3KNP5 305 aa6.82□□□□□ -1.32
Trim39-201ENSMUST00000042717 Psg19Q4KL31 475 aa6.82□□□□□ -1.32
Trim39-201ENSMUST00000042717 Olfr1371Q7TQT7 311 aa6.82□□□□□ -1.32
Trim39-201ENSMUST00000042717 Olfr305Q7TS02 319 aa6.82□□□□□ -1.32
Trim39-201ENSMUST00000042717 Znf641Q8BZ34 422 aa6.82□□□□□ -1.32
Trim39-201ENSMUST00000042717 Efcab10Q9D581 132 aa6.82□□□□□ -1.32
Trim39-201ENSMUST00000042717 Ly6lH3BJG9 140 aa6.82□□□□□ -1.32
Trim39-201ENSMUST00000042717 Gm28051J3QMA2 81 aa6.82□□□□□ -1.32
Trim39-201ENSMUST00000042717 Ifna5P07349 189 aa6.82□□□□□ -1.32
Trim39-201ENSMUST00000042717 Trav2Q5R1I9 109 aa6.82□□□□□ -1.32
Trim39-201ENSMUST00000042717 Minos1Q7TNS2 76 aa6.82□□□□□ -1.32
Trim39-201ENSMUST00000042717 Spink10Q8CAC8 162 aa6.82□□□□□ -1.32
Trim39-201ENSMUST00000042717 Lrrc10Q8K3W2 274 aa6.82□□□□□ -1.32
Trim39-201ENSMUST00000042717 Rnf126Q91YL2 313 aa6.82□□□□□ -1.32
Trim39-201ENSMUST00000042717 Nus1Q99LJ8 297 aa6.82□□□□□ -1.32
Trim39-201ENSMUST00000042717 Glo1Q9CPU0 184 aa6.82□□□□□ -1.32
Trim39-201ENSMUST00000042717 Vmn1r54Q9EPB8 315 aa6.82□□□□□ -1.32
Trim39-201ENSMUST00000042717 Usp9yF8VPU6 2556 aa6.82□□□□□ -1.32
Trim39-201ENSMUST00000042717 Chd9Q8BYH8 2885 aa6.82□□□□□ -1.32
Trim39-201ENSMUST00000042717 Ighv3-1A0A075B5S6 116 aa6.82□□□□□ -1.32
Trim39-201ENSMUST00000042717 Gm10521E9PZK0 135 aa6.82□□□□□ -1.32
Trim39-201ENSMUST00000042717 BC030500E9Q6W0 185 aa6.82□□□□□ -1.32
Trim39-201ENSMUST00000042717 Fut9O88819 359 aa6.82□□□□□ -1.32
Trim39-201ENSMUST00000042717 Fabp6P51162 128 aa6.82□□□□□ -1.32
Trim39-201ENSMUST00000042717 Oosp2Q4FZG8 168 aa6.82□□□□□ -1.32
Trim39-201ENSMUST00000042717 Fam173aQ501J2 229 aa6.82□□□□□ -1.32
Trim39-201ENSMUST00000042717 Sdr39u1Q5M8N4 308 aa6.82□□□□□ -1.32
Trim39-201ENSMUST00000042717 Cd200r3Q5UKY4 296 aa6.82□□□□□ -1.32
Trim39-201ENSMUST00000042717 Olfr433Q7TRV9 314 aa6.82□□□□□ -1.32
Trim39-201ENSMUST00000042717 Ighv6-4A0A0A6YX19 119 aa6.81□□□□□ -1.32
Trim39-201ENSMUST00000042717 Mettl8A2AUU0 281 aa6.81□□□□□ -1.32
Trim39-201ENSMUST00000042717 Gm15140A2BEE3 237 aa6.81□□□□□ -1.32
Trim39-201ENSMUST00000042717 Gm12886B1AZM5 119 aa6.81□□□□□ -1.32
Trim39-201ENSMUST00000042717 Fut1O09160 376 aa6.81□□□□□ -1.32
Trim39-201ENSMUST00000042717 Defb26Q30KN7 186 aa6.81□□□□□ -1.32
Trim39-201ENSMUST00000042717 Olfr1386Q7TQT0 309 aa6.81□□□□□ -1.32
Trim39-201ENSMUST00000042717 Tusc5Q8C838 173 aa6.81□□□□□ -1.32
Trim39-201ENSMUST00000042717 Olfr873Q8VFJ0 319 aa6.81□□□□□ -1.32
Trim39-201ENSMUST00000042717 Mad2l1bpQ9DCX1 276 aa6.81□□□□□ -1.32
Trim39-201ENSMUST00000042717 Gpr34Q9R1K6 375 aa6.81□□□□□ -1.32
Trim39-201ENSMUST00000042717 Sorl1O88307 2215 aaKnown RBP6.81□□□□□ -1.32
Trim39-201ENSMUST00000042717 Gm20773A0A0A6YXW2 232 aa6.81□□□□□ -1.32
Trim39-201ENSMUST00000042717 Gm20807A0A0A6YXX7 232 aa6.81□□□□□ -1.32
Trim39-201ENSMUST00000042717 Olfr1016A2ASV2 309 aa6.81□□□□□ -1.32
Trim39-201ENSMUST00000042717 Esp23A8R0V5 104 aa6.81□□□□□ -1.32
Trim39-201ENSMUST00000042717 Rnf212bD3Z423 297 aa6.81□□□□□ -1.32
Trim39-201ENSMUST00000042717 Gm20873J3QMQ9 232 aa6.81□□□□□ -1.32
Trim39-201ENSMUST00000042717 Gm20795J3QP49 232 aa6.81□□□□□ -1.32
Trim39-201ENSMUST00000042717 Gm21310J3QQ23 232 aa6.81□□□□□ -1.32
Trim39-201ENSMUST00000042717 P01915 264 aa6.81□□□□□ -1.32
Trim39-201ENSMUST00000042717 Hoxa5P09021 270 aa6.81□□□□□ -1.32
Trim39-201ENSMUST00000042717 Gm21440Q3TTD8 232 aa6.81□□□□□ -1.32
Trim39-201ENSMUST00000042717 D630044L22RikQ8C701 164 aa6.81□□□□□ -1.32
Trim39-201ENSMUST00000042717 Olfr1002Q8VFK2 318 aa6.81□□□□□ -1.32
Trim39-201ENSMUST00000042717 Rasl11bQ922H7 247 aa6.81□□□□□ -1.32
Trim39-201ENSMUST00000042717 Uqcc1Q9CWU6 295 aa6.81□□□□□ -1.32
Trim39-201ENSMUST00000042717 Vmn1r46Q9EQ45 309 aa6.81□□□□□ -1.32
Trim39-201ENSMUST00000042717 Vmn1r232A2RTT5 351 aa6.8□□□□□ -1.32
Trim39-201ENSMUST00000042717 Olfr872E9PVW2 323 aa6.8□□□□□ -1.32
Trim39-201ENSMUST00000042717 Gm3512L7N206 146 aa6.8□□□□□ -1.32
Retrieved 100 of 22,080 RNA–protein pairs in 51 ms