RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 AsipQ03288 131 aa10.83□□□□□ -0.68
Nup88-201ENSMUST00000035283 SelplgQ62170 397 aa10.83□□□□□ -0.68
Nup88-201ENSMUST00000035283 Ube2v1Q9CZY3 147 aa10.83□□□□□ -0.68
Nup88-201ENSMUST00000035283 Lamtor2Q9JHS3 125 aa10.83□□□□□ -0.68
Nup88-201ENSMUST00000035283 Pf4Q9Z126 105 aa10.83□□□□□ -0.68
Nup88-201ENSMUST00000035283 Vmn1r61W4VSP5 300 aa10.83□□□□□ -0.68
Nup88-201ENSMUST00000035283 Gvin1Q80SU7 2427 aa10.83□□□□□ -0.68
Nup88-201ENSMUST00000035283 PoleQ9WVF7 2283 aa10.83□□□□□ -0.68
Nup88-201ENSMUST00000035283 Rpl13a-ps1A0A140T8K2 203 aaKnown RBP10.83□□□□□ -0.68
Nup88-201ENSMUST00000035283 Lcn2P11672 200 aa10.83□□□□□ -0.68
Nup88-201ENSMUST00000035283 Cdkn1bP46414 197 aa10.83□□□□□ -0.68
Nup88-201ENSMUST00000035283 Clec4b2Q67DU8 208 aa10.83□□□□□ -0.68
Nup88-201ENSMUST00000035283 Fam222bQ6P539 562 aa10.83□□□□□ -0.68
Nup88-201ENSMUST00000035283 Olfr1462Q8VFW3 307 aa10.83□□□□□ -0.68
Nup88-201ENSMUST00000035283 Q9CQ90 155 aa10.83□□□□□ -0.68
Nup88-201ENSMUST00000035283 Psmb2Q9R1P3 201 aa10.83□□□□□ -0.68
Nup88-201ENSMUST00000035283 Map1aQ9QYR6 2776 aa10.83□□□□□ -0.68
Nup88-201ENSMUST00000035283 F5O88783 2183 aa10.83□□□□□ -0.68
Nup88-201ENSMUST00000035283 Igkv19-93A0A0G2JFZ3 115 aa10.82□□□□□ -0.68
Nup88-201ENSMUST00000035283 Gm15127B1AVZ5 449 aa10.82□□□□□ -0.68
Nup88-201ENSMUST00000035283 Gm15091B1AZM2 449 aa10.82□□□□□ -0.68
Nup88-201ENSMUST00000035283 Nat8f4G5E8L3 226 aa10.82□□□□□ -0.68
Nup88-201ENSMUST00000035283 ErhP84089 104 aa10.82□□□□□ -0.68
Nup88-201ENSMUST00000035283 Tmed6Q9CQG0 239 aa10.82□□□□□ -0.68
Nup88-201ENSMUST00000035283 Olfr961Q9EQ84 314 aa10.82□□□□□ -0.68
Nup88-201ENSMUST00000035283 Dolpp1Q9JMF7 238 aa10.82□□□□□ -0.68
Nup88-201ENSMUST00000035283 AtrxQ61687 2476 aaKnown RBP10.82□□□□□ -0.68
Nup88-201ENSMUST00000035283 Ahctf1Q8CJF7 2243 aaKnown RBP10.82□□□□□ -0.68
Nup88-201ENSMUST00000035283 Tnfaip6O08859 275 aa10.82□□□□□ -0.68
Nup88-201ENSMUST00000035283 Phxr2P15972 65 aa10.82□□□□□ -0.68
Nup88-201ENSMUST00000035283 Slc25a5P51881 298 aaKnown RBP10.82□□□□□ -0.68
Nup88-201ENSMUST00000035283 Timm8bP62077 83 aaKnown RBP10.82□□□□□ -0.68
Nup88-201ENSMUST00000035283 Gm4792Q569Q2 183 aa10.82□□□□□ -0.68
Nup88-201ENSMUST00000035283 Ccl12Q62401 104 aa10.82□□□□□ -0.68
Nup88-201ENSMUST00000035283 Olfr481Q8VGI5 312 aa10.82□□□□□ -0.68
Nup88-201ENSMUST00000035283 Gatad1Q920S3 266 aa10.82□□□□□ -0.68
Nup88-201ENSMUST00000035283 SelenokQ9JLJ1 94 aa10.82□□□□□ -0.68
Nup88-201ENSMUST00000035283 Igkv14-130A0A0G2JF45 117 aa10.81□□□□□ -0.68
Nup88-201ENSMUST00000035283 Zfp114B2RRA8 586 aa10.81□□□□□ -0.68
Nup88-201ENSMUST00000035283 Olfr748E9Q9Z0 307 aa10.81□□□□□ -0.68
Nup88-201ENSMUST00000035283 Olfr898L7N1Z5 316 aa10.81□□□□□ -0.68
Nup88-201ENSMUST00000035283 Mc5rP41149 325 aa10.81□□□□□ -0.68
Nup88-201ENSMUST00000035283 Fbln7Q501P1 440 aa10.81□□□□□ -0.68
Nup88-201ENSMUST00000035283 Tmem140Q8BGY5 185 aa10.81□□□□□ -0.68
Nup88-201ENSMUST00000035283 Stpg2Q8C8J0 561 aa10.81□□□□□ -0.68
Nup88-201ENSMUST00000035283 Fam110aQ8R184 296 aa10.81□□□□□ -0.68
Nup88-201ENSMUST00000035283 Olfr127Q8VF25 323 aa10.81□□□□□ -0.68
Nup88-201ENSMUST00000035283 Tmprss5Q9ER04 455 aa10.81□□□□□ -0.68
Nup88-201ENSMUST00000035283 P01759 136 aa10.81□□□□□ -0.68
Nup88-201ENSMUST00000035283 Gpm6bP35803 328 aa10.81□□□□□ -0.68
Nup88-201ENSMUST00000035283 Mogat1Q91ZV4 335 aa10.81□□□□□ -0.68
Nup88-201ENSMUST00000035283 Vstm5Q9D806 199 aa10.81□□□□□ -0.68
Nup88-201ENSMUST00000035283 HeylQ9DBX7 326 aa10.81□□□□□ -0.68
Nup88-201ENSMUST00000035283 Igkv1-133A0A0B4J1H8 120 aa10.8□□□□□ -0.68
Nup88-201ENSMUST00000035283 1700084M14RikB1AT01 78 aa10.8□□□□□ -0.68
Nup88-201ENSMUST00000035283 Gm5093E9PZB3 174 aa10.8□□□□□ -0.68
Nup88-201ENSMUST00000035283 Gm21874J3QNZ6 232 aa10.8□□□□□ -0.68
Nup88-201ENSMUST00000035283 Slc25a17O70579 307 aa10.8□□□□□ -0.68
Nup88-201ENSMUST00000035283 Loxl2P58022 776 aa10.8□□□□□ -0.68
Nup88-201ENSMUST00000035283 Prop1P97458 223 aa10.8□□□□□ -0.68
Nup88-201ENSMUST00000035283 RprmlQ3URD2 117 aa10.8□□□□□ -0.68
Nup88-201ENSMUST00000035283 Dmrtc2Q8CGW9 370 aa10.8□□□□□ -0.68
Nup88-201ENSMUST00000035283 Olfr1454Q8VFW2 307 aa10.8□□□□□ -0.68
Nup88-201ENSMUST00000035283 Zfp950A0A0U1RQ46 609 aa10.8□□□□□ -0.68
Nup88-201ENSMUST00000035283 Rhox7bA6PW38 321 aa10.8□□□□□ -0.68
Nup88-201ENSMUST00000035283 IappP12968 93 aa10.8□□□□□ -0.68
Nup88-201ENSMUST00000035283 Tmem204Q7TQI0 226 aa10.8□□□□□ -0.68
Nup88-201ENSMUST00000035283 Cphx2Q8BX39 182 aa10.8□□□□□ -0.68
Nup88-201ENSMUST00000035283 Olfr19Q9JHB2 309 aa10.8□□□□□ -0.68
Nup88-201ENSMUST00000035283 Arhgef17Q80U35 2057 aa10.8□□□□□ -0.68
Nup88-201ENSMUST00000035283 AcacaQ5SWU9 2345 aa10.79□□□□□ -0.68
Nup88-201ENSMUST00000035283 Ighv1-62-2A0A0A6YXZ4 119 aa10.79□□□□□ -0.68
Nup88-201ENSMUST00000035283 Rpl27aP14115 148 aaKnown RBP10.79□□□□□ -0.68
Nup88-201ENSMUST00000035283 Reg1P43137 165 aa10.79□□□□□ -0.68
Nup88-201ENSMUST00000035283 Pmis2Q497Q9 96 aa10.79□□□□□ -0.68
Nup88-201ENSMUST00000035283 Fam213bQ9DB60 201 aa10.79□□□□□ -0.68
Nup88-201ENSMUST00000035283 Zzef1Q5SSH7 2924 aa10.79□□□□□ -0.68
Nup88-201ENSMUST00000035283 Trav4-4-dv10A0A075B651 110 aa10.79□□□□□ -0.68
Nup88-201ENSMUST00000035283 Gm45213A0A0U1RNZ6 101 aa10.79□□□□□ -0.68
Nup88-201ENSMUST00000035283 Gm15128A2ADW8 449 aa10.79□□□□□ -0.68
Nup88-201ENSMUST00000035283 Gm15080A2BI02 449 aa10.79□□□□□ -0.68
Nup88-201ENSMUST00000035283 Gm15093A2BI72 449 aa10.79□□□□□ -0.68
Nup88-201ENSMUST00000035283 Luzp4B1AV09 449 aa10.79□□□□□ -0.68
Nup88-201ENSMUST00000035283 Gm15107B1B0X0 449 aa10.79□□□□□ -0.68
Nup88-201ENSMUST00000035283 Vmn1r1E9PVR6 306 aa10.79□□□□□ -0.68
Nup88-201ENSMUST00000035283 Gm20458E9PXJ7 78 aa10.79□□□□□ -0.68
Nup88-201ENSMUST00000035283 Olfr177E9Q7W1 309 aa10.79□□□□□ -0.68
Nup88-201ENSMUST00000035283 Gm15097E9QA14 449 aa10.79□□□□□ -0.68
Nup88-201ENSMUST00000035283 Gm6970F7DCP6 221 aa10.79□□□□□ -0.68
Nup88-201ENSMUST00000035283 Znf691Q3TDE8 283 aa10.79□□□□□ -0.68
Nup88-201ENSMUST00000035283 Gm15085Q62012 449 aa10.79□□□□□ -0.68
Nup88-201ENSMUST00000035283 Ptrh2Q8R2Y8 181 aaKnown RBP10.79□□□□□ -0.68
Nup88-201ENSMUST00000035283 Olfr958Q8VEY3 312 aa10.79□□□□□ -0.68
Nup88-201ENSMUST00000035283 Tln2Q71LX4 2375 aa10.78□□□□□ -0.68
Nup88-201ENSMUST00000035283 NpyP57774 97 aa10.78□□□□□ -0.68
Nup88-201ENSMUST00000035283 Tpsab1Q02844 273 aa10.78□□□□□ -0.68
Nup88-201ENSMUST00000035283 C1qtnf5Q8K479 243 aa10.78□□□□□ -0.68
Nup88-201ENSMUST00000035283 Tmem225Q9D9S2 230 aa10.78□□□□□ -0.68
Nup88-201ENSMUST00000035283 Ramp1Q9WTJ5 148 aa10.78□□□□□ -0.68
Nup88-201ENSMUST00000035283 Ighv1-16A0A075B5U1 98 aa10.78□□□□□ -0.68
Retrieved 100 of 22,080 RNA–protein pairs in 10.8 ms