RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, human

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-223	ENST00000641597	NDUFA12	Q9UI09	145 aa		12.1	□□□□□ -0.47
PHGDH-223	ENST00000641597	SIGMAR1	Q99720	223 aa		12.1	□□□□□ -0.47
PHGDH-223	ENST00000641597	EDA2R	Q9HAV5	297 aa		12.1	□□□□□ -0.47
PHGDH-223	ENST00000641597		Q1RN00	199 aa		12.09	□□□□□ -0.47
PHGDH-223	ENST00000641597	CITED2	Q99967	270 aa	Predicted RBP	12.09	□□□□□ -0.47
PHGDH-223	ENST00000641597	IGHV1-58	A0A0C4DH39	117 aa		12.09	□□□□□ -0.47
PHGDH-223	ENST00000641597		A0A0U1RRA0	63 aa		12.09	□□□□□ -0.47
PHGDH-223	ENST00000641597	STH	Q8IWL8	128 aa		12.09	□□□□□ -0.47
PHGDH-223	ENST00000641597	VSIG2	Q96IQ7	327 aa		12.09	□□□□□ -0.47
PHGDH-223	ENST00000641597	ZNF625	Q96I27	306 aa	Predicted RBP	12.08	□□□□□ -0.48
PHGDH-223	ENST00000641597		J3QR89	54 aa		12.08	□□□□□ -0.48
PHGDH-223	ENST00000641597	CCL24	O00175	119 aa		12.07	□□□□□ -0.48
PHGDH-223	ENST00000641597	RS1	O15537	224 aa		12.07	□□□□□ -0.48
PHGDH-223	ENST00000641597	BEAN1	Q3B7T3	259 aa		12.07	□□□□□ -0.48
PHGDH-223	ENST00000641597	SPATA25	Q9BR10	227 aa		12.07	□□□□□ -0.48
PHGDH-223	ENST00000641597	ERG28	Q9UKR5	140 aa		12.07	□□□□□ -0.48
PHGDH-223	ENST00000641597	FASN	P49327	2511 aa	Known RBP	12.07	□□□□□ -0.48
PHGDH-223	ENST00000641597	NOTCH2	Q04721	2471 aa		12.07	□□□□□ -0.48
PHGDH-223	ENST00000641597		C9JAW5	83 aa		12.07	□□□□□ -0.48
PHGDH-223	ENST00000641597	ANKRD29	Q8N6D5	301 aa		12.07	□□□□□ -0.48
PHGDH-223	ENST00000641597	GEMIN7	Q9H840	131 aa	Known RBP	12.06	□□□□□ -0.48
PHGDH-223	ENST00000641597	CDIP1	Q9H305	208 aa		12.06	□□□□□ -0.48
PHGDH-223	ENST00000641597	TINCR	A0A1B0GVN0	87 aa		12.05	□□□□□ -0.48
PHGDH-223	ENST00000641597	NTM-AS1	Q6ZSK4	140 aa		12.05	□□□□□ -0.48
PHGDH-223	ENST00000641597	SPANXA1	Q9NS26	97 aa		12.05	□□□□□ -0.48
PHGDH-223	ENST00000641597	ANK3	Q12955	4377 aa	Known RBP	12.05	□□□□□ -0.48
PHGDH-223	ENST00000641597	UNC79	Q9P2D8	2635 aa		12.04	□□□□□ -0.48
PHGDH-223	ENST00000641597	DGAT2L7P	Q6IED9	249 aa		12.04	□□□□□ -0.48
PHGDH-223	ENST00000641597	NOP10	Q9NPE3	64 aa	Known RBP	12.04	□□□□□ -0.48
PHGDH-223	ENST00000641597	TRAV13-1	A0A0B4J241	112 aa		12.04	□□□□□ -0.48
PHGDH-223	ENST00000641597	TRIAP1	O43715	76 aa		12.04	□□□□□ -0.48
PHGDH-223	ENST00000641597	LOC100131303	A0A0U1RQF7	123 aa		12.03	□□□□□ -0.48
PHGDH-223	ENST00000641597	GAGE12J	A6NER3	117 aa		12.03	□□□□□ -0.48
PHGDH-223	ENST00000641597	GIG44	P09565	113 aa	Predicted RBP	12.03	□□□□□ -0.48
PHGDH-223	ENST00000641597	RPL35A	P18077	110 aa	Known RBP	12.03	□□□□□ -0.48
PHGDH-223	ENST00000641597	GAGE4	Q13068	117 aa		12.03	□□□□□ -0.48
PHGDH-223	ENST00000641597	GAGE5	Q13069	117 aa		12.03	□□□□□ -0.48
PHGDH-223	ENST00000641597	TEN1	Q86WV5	123 aa		12.03	□□□□□ -0.48
PHGDH-223	ENST00000641597	LRRC75A-AS1	Q8N1F1	130 aa		12.03	□□□□□ -0.48
PHGDH-223	ENST00000641597	TMEM101	Q96IK0	257 aa		12.03	□□□□□ -0.48
PHGDH-223	ENST00000641597		A0A0B4J2C4	111 aa		12.03	□□□□□ -0.48
PHGDH-223	ENST00000641597	HIVEP2	P31629	2446 aa		12.02	□□□□□ -0.48
PHGDH-223	ENST00000641597	TRBV20-1	A0A075B6N2	111 aa		12.02	□□□□□ -0.48
PHGDH-223	ENST00000641597	SLC25A20	O43772	301 aa		12.02	□□□□□ -0.49
PHGDH-223	ENST00000641597	LINC00242	Q5T6M2	205 aa		12.01	□□□□□ -0.49
PHGDH-223	ENST00000641597	HECTD1	Q9ULT8	2610 aa		12.01	□□□□□ -0.49
PHGDH-223	ENST00000641597	MT-ATP8	P03928	68 aa		12.01	□□□□□ -0.49
PHGDH-223	ENST00000641597	LYRM7	Q5U5X0	104 aa		12.01	□□□□□ -0.49
PHGDH-223	ENST00000641597	PIK3CD-AS1	Q5SR53	167 aa		12	□□□□□ -0.49
PHGDH-223	ENST00000641597	SBSPON	Q8IVN8	264 aa		12	□□□□□ -0.49
PHGDH-223	ENST00000641597	XG	P55808	180 aa		12	□□□□□ -0.49
PHGDH-223	ENST00000641597	ZFAND6	Q6FIF0	208 aa		12	□□□□□ -0.49
PHGDH-223	ENST00000641597	IL17D	Q8TAD2	202 aa		12	□□□□□ -0.49
PHGDH-223	ENST00000641597	MIA	Q16674	131 aa		11.99	□□□□□ -0.49
PHGDH-223	ENST00000641597	ATP6V0E2	Q8NHE4	81 aa		11.99	□□□□□ -0.49
PHGDH-223	ENST00000641597	LINC01006	Q8NI28	216 aa		11.99	□□□□□ -0.49
PHGDH-223	ENST00000641597	PPDPFL	Q8WWR9	84 aa		11.99	□□□□□ -0.49
PHGDH-223	ENST00000641597	CLEC2B	Q92478	149 aa		11.99	□□□□□ -0.49
PHGDH-223	ENST00000641597	GAGE7	O76087	117 aa		11.99	□□□□□ -0.49
PHGDH-223	ENST00000641597	GAGE12F	P0CL80	117 aa		11.99	□□□□□ -0.49
PHGDH-223	ENST00000641597	GAGE12G	P0CL81	117 aa		11.99	□□□□□ -0.49
PHGDH-223	ENST00000641597	GAGE12I	P0CL82	117 aa		11.99	□□□□□ -0.49
PHGDH-223	ENST00000641597	CRYBA4	P53673	196 aa		11.99	□□□□□ -0.49
PHGDH-223	ENST00000641597	DNAJC30	Q96LL9	226 aa		11.99	□□□□□ -0.49
PHGDH-223	ENST00000641597	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	11.98	□□□□□ -0.49
PHGDH-223	ENST00000641597		Q9H8V8	135 aa		11.98	□□□□□ -0.49
PHGDH-223	ENST00000641597	KRTAP1-1	Q07627	177 aa		11.98	□□□□□ -0.49
PHGDH-223	ENST00000641597	TENM1	Q9UKZ4	2725 aa		11.97	□□□□□ -0.49
PHGDH-223	ENST00000641597		K7EQD1	137 aa		11.97	□□□□□ -0.49
PHGDH-223	ENST00000641597	PLAC8L1	A1L4L8	177 aa		11.97	□□□□□ -0.49
PHGDH-223	ENST00000641597	IGKV3OR2-268	A0A0C4DH90	116 aa		11.96	□□□□□ -0.49
PHGDH-223	ENST00000641597	NTN5	Q8WTR8	489 aa	Predicted RBP	11.96	□□□□□ -0.49
PHGDH-223	ENST00000641597	SPANXD	Q9BXN6	97 aa		11.96	□□□□□ -0.49
PHGDH-223	ENST00000641597	YAE1D1	Q9NRH1	226 aa		11.96	□□□□□ -0.49
PHGDH-223	ENST00000641597	SPANXC	Q9NY87	97 aa		11.96	□□□□□ -0.49
PHGDH-223	ENST00000641597	TEX49	A0A1B0GTD5	131 aa		11.96	□□□□□ -0.5
PHGDH-223	ENST00000641597	LINC01620	Q4KN68	170 aa		11.96	□□□□□ -0.5
PHGDH-223	ENST00000641597	ICOS	Q9Y6W8	199 aa		11.96	□□□□□ -0.5
PHGDH-223	ENST00000641597	RPL36A	P83881	106 aa	Known RBP	11.95	□□□□□ -0.5
PHGDH-223	ENST00000641597	RPL36AL	Q969Q0	106 aa	Known RBP	11.95	□□□□□ -0.5
PHGDH-223	ENST00000641597	TMEM86B	Q8N661	226 aa		11.95	□□□□□ -0.5
PHGDH-223	ENST00000641597	SMR3A	Q99954	134 aa		11.95	□□□□□ -0.5
PHGDH-223	ENST00000641597	OTOG	Q6ZRI0	2925 aa		11.95	□□□□□ -0.5
PHGDH-223	ENST00000641597	IGLV5-45	A0A087WSX0	123 aa		11.94	□□□□□ -0.5
PHGDH-223	ENST00000641597	SMIM1	B2RUZ4	78 aa		11.94	□□□□□ -0.5
PHGDH-223	ENST00000641597	TRGV2	A0A075B6R0	118 aa		11.94	□□□□□ -0.5
PHGDH-223	ENST00000641597	RPL13A	P40429	203 aa	Known RBP	11.94	□□□□□ -0.5
PHGDH-223	ENST00000641597	SOSTDC1	Q6X4U4	206 aa		11.94	□□□□□ -0.5
PHGDH-223	ENST00000641597	TRAV25	A0A0B4J276	109 aa		11.93	□□□□□ -0.5
PHGDH-223	ENST00000641597	NDUFA1	O15239	70 aa		11.93	□□□□□ -0.5
PHGDH-223	ENST00000641597	TIRAP	P58753	221 aa		11.93	□□□□□ -0.5
PHGDH-223	ENST00000641597	TRBV30	A0A0K0K1B3	111 aa		11.92	□□□□□ -0.5
PHGDH-223	ENST00000641597	ATXN8	Q156A1	80 aa		11.92	□□□□□ -0.5
PHGDH-223	ENST00000641597	C19orf73	Q9NVV2	129 aa		11.92	□□□□□ -0.5
PHGDH-223	ENST00000641597	CLUHP3	Q96NS8	147 aa		11.92	□□□□□ -0.5
PHGDH-223	ENST00000641597	CDC42SE2	Q9NRR3	84 aa		11.92	□□□□□ -0.5
PHGDH-223	ENST00000641597	IGLV5-39	A0A0G2JS06	123 aa		11.91	□□□□□ -0.5
PHGDH-223	ENST00000641597	TRAV4	A0A0B4J268	109 aa		11.91	□□□□□ -0.5
PHGDH-223	ENST00000641597	LINC00308	Q8TCZ7	52 aa		11.9	□□□□□ -0.5
PHGDH-223	ENST00000641597		F5H768	121 aa		11.9	□□□□□ -0.5

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