RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 G3V4G9 280 aa10.69□□□□□ -0.7
SCARB2-216ENST00000639300 PRO0255Q9UI72 69 aa10.69□□□□□ -0.7
SCARB2-216ENST00000639300 C1orf43Q9BWL3 253 aa10.68□□□□□ -0.7
SCARB2-216ENST00000639300 CNFNQ9BYD5 112 aa10.68□□□□□ -0.7
SCARB2-216ENST00000639300 F8WEM9 126 aa10.68□□□□□ -0.7
SCARB2-216ENST00000639300 CFAP126Q5VTH2 177 aa10.68□□□□□ -0.7
SCARB2-216ENST00000639300 CRYGDP07320 174 aa10.68□□□□□ -0.7
SCARB2-216ENST00000639300 POLR2KP53803 58 aaKnown RBP10.67□□□□□ -0.7
SCARB2-216ENST00000639300 KRTAP10-9P60411 292 aa10.67□□□□□ -0.7
SCARB2-216ENST00000639300 CAMK2N2Q96S95 79 aa10.67□□□□□ -0.7
SCARB2-216ENST00000639300 WFDC10AQ9H1F0 79 aa10.67□□□□□ -0.7
SCARB2-216ENST00000639300 PSMG3-AS1Q96PY0 264 aa10.67□□□□□ -0.7
SCARB2-216ENST00000639300 VPS13AQ96RL7 3174 aa10.67□□□□□ -0.7
SCARB2-216ENST00000639300 LECT2O14960 151 aa10.67□□□□□ -0.7
SCARB2-216ENST00000639300 USP24Q9UPU5 2620 aa10.67□□□□□ -0.7
SCARB2-216ENST00000639300 LRRC75A-AS1Q8N1F1 130 aa10.67□□□□□ -0.7
SCARB2-216ENST00000639300 ORMDL1Q9P0S3 153 aa10.66□□□□□ -0.7
SCARB2-216ENST00000639300 DSCR8Q96T75 97 aa10.66□□□□□ -0.7
SCARB2-216ENST00000639300 MIAQ16674 131 aa10.65□□□□□ -0.7
SCARB2-216ENST00000639300 TRBV10-2A0A0K0K1G8 114 aa10.65□□□□□ -0.7
SCARB2-216ENST00000639300 MGAQ8IWI9 3026 aa10.65□□□□□ -0.7
SCARB2-216ENST00000639300 H0YGX0 51 aa10.65□□□□□ -0.7
SCARB2-216ENST00000639300 FAM222AQ5U5X8 452 aa10.65□□□□□ -0.7
SCARB2-216ENST00000639300 TMEM223A0PJW6 202 aa10.65□□□□□ -0.71
SCARB2-216ENST00000639300 TRAV26-1A0A087WT03 109 aa10.64□□□□□ -0.71
SCARB2-216ENST00000639300 TRBV6-5A0A0K0K1A5 114 aa10.64□□□□□ -0.71
SCARB2-216ENST00000639300 B5MCH6 92 aa10.64□□□□□ -0.71
SCARB2-216ENST00000639300 LINC00482Q8N8I6 264 aa10.64□□□□□ -0.71
SCARB2-216ENST00000639300 RPL32P62910 135 aaKnown RBP10.64□□□□□ -0.71
SCARB2-216ENST00000639300 TMEM126AQ9H061 195 aa10.64□□□□□ -0.71
SCARB2-216ENST00000639300 TSHBP01222 138 aa10.63□□□□□ -0.71
SCARB2-216ENST00000639300 DEFB105AQ8NG35 78 aa10.63□□□□□ -0.71
SCARB2-216ENST00000639300 SPAG11BQ08648 103 aa10.63□□□□□ -0.71
SCARB2-216ENST00000639300 LINC01006Q8NI28 216 aa10.63□□□□□ -0.71
SCARB2-216ENST00000639300 PTPRBP23467 1997 aa10.63□□□□□ -0.71
SCARB2-216ENST00000639300 A0A096LNJ9 63 aa10.62□□□□□ -0.71
SCARB2-216ENST00000639300 IGKV3D-7A0A0C4DH55 119 aa10.62□□□□□ -0.71
SCARB2-216ENST00000639300 INAFM1C9JVW0 142 aa10.62□□□□□ -0.71
SCARB2-216ENST00000639300 LINC00269Q8N2A0 174 aa10.62□□□□□ -0.71
SCARB2-216ENST00000639300 PIK3CD-AS1Q5SR53 167 aa10.61□□□□□ -0.71
SCARB2-216ENST00000639300 C9orf85Q96MD7 179 aa10.61□□□□□ -0.71
SCARB2-216ENST00000639300 MUC4Q99102 2169 aa10.61□□□□□ -0.71
SCARB2-216ENST00000639300 HECTD1Q9ULT8 2610 aa10.61□□□□□ -0.71
SCARB2-216ENST00000639300 H3BT86 120 aa10.61□□□□□ -0.71
SCARB2-216ENST00000639300 NCR3O14931 201 aa10.61□□□□□ -0.71
SCARB2-216ENST00000639300 COL4A2P08572 1712 aa10.6□□□□□ -0.71
SCARB2-216ENST00000639300 ZMAT4Q9H898 229 aa10.6□□□□□ -0.71
SCARB2-216ENST00000639300 A0A0B4J2C4 111 aa10.59□□□□□ -0.71
SCARB2-216ENST00000639300 INSL3P51460 131 aa10.59□□□□□ -0.71
SCARB2-216ENST00000639300 SPANXB1Q9NS25 103 aaPredicted RBP10.59□□□□□ -0.71
SCARB2-216ENST00000639300 TEX49A0A1B0GTD5 131 aa10.59□□□□□ -0.71
SCARB2-216ENST00000639300 SZT2Q5T011 3432 aa10.59□□□□□ -0.71
SCARB2-216ENST00000639300 MAP1AP78559 2803 aaPredicted RBP10.58□□□□□ -0.72
SCARB2-216ENST00000639300 LOC100131303A0A0U1RQF7 123 aa10.58□□□□□ -0.72
SCARB2-216ENST00000639300 RPL18AQ02543 176 aaKnown RBP10.58□□□□□ -0.72
SCARB2-216ENST00000639300 RBX1P62877 108 aa10.57□□□□□ -0.72
SCARB2-216ENST00000639300 F8P00451 2351 aa10.57□□□□□ -0.72
SCARB2-216ENST00000639300 TRIAP1O43715 76 aa10.57□□□□□ -0.72
SCARB2-216ENST00000639300 LINC00308Q8TCZ7 52 aa10.57□□□□□ -0.72
SCARB2-216ENST00000639300 RMI2Q96E14 147 aa10.57□□□□□ -0.72
SCARB2-216ENST00000639300 IGIPA6NJ69 53 aa10.57□□□□□ -0.72
SCARB2-216ENST00000639300 NDUFA1O15239 70 aa10.57□□□□□ -0.72
SCARB2-216ENST00000639300 ACYP1P07311 99 aa10.57□□□□□ -0.72
SCARB2-216ENST00000639300 PYGO1Q9Y3Y4 419 aa10.57□□□□□ -0.72
SCARB2-216ENST00000639300 SPANXCQ9NY87 97 aa10.56□□□□□ -0.72
SCARB2-216ENST00000639300 TRBV6-8A0A0A6YYG3 113 aa10.56□□□□□ -0.72
SCARB2-216ENST00000639300 COX8CQ7Z4L0 72 aa10.56□□□□□ -0.72
SCARB2-216ENST00000639300 ODF3L2Q3SX64 289 aa10.55□□□□□ -0.72
SCARB2-216ENST00000639300 FAM236AA0A1B0GUQ0 79 aa10.55□□□□□ -0.72
SCARB2-216ENST00000639300 FAM236BA0A1B0GV22 79 aa10.55□□□□□ -0.72
SCARB2-216ENST00000639300 CCL18P55774 89 aa10.55□□□□□ -0.72
SCARB2-216ENST00000639300 REG3AQ06141 175 aa10.55□□□□□ -0.72
SCARB2-216ENST00000639300 HIGD2BQ4VC39 106 aa10.55□□□□□ -0.72
SCARB2-216ENST00000639300 MT-ATP8P03928 68 aa10.54□□□□□ -0.72
SCARB2-216ENST00000639300 CRIP2P52943 208 aaPredicted RBP10.54□□□□□ -0.72
SCARB2-216ENST00000639300 TIRAPP58753 221 aa10.54□□□□□ -0.72
SCARB2-216ENST00000639300 BBC3Q96PG8 261 aaPredicted RBP10.54□□□□□ -0.72
SCARB2-216ENST00000639300 PCSK5Q92824 1860 aa10.54□□□□□ -0.72
SCARB2-216ENST00000639300 TRBV6-4A0A1B0GX49 114 aa10.53□□□□□ -0.72
SCARB2-216ENST00000639300 NDUFA7O95182 113 aa10.53□□□□□ -0.72
SCARB2-216ENST00000639300 UBE2BP63146 152 aa10.53□□□□□ -0.72
SCARB2-216ENST00000639300 C14orf132Q9NPU4 83 aa10.53□□□□□ -0.72
SCARB2-216ENST00000639300 CHCHD10Q8WYQ3 142 aaPredicted RBP10.53□□□□□ -0.72
SCARB2-216ENST00000639300 UBE2D4Q9Y2X8 147 aa10.53□□□□□ -0.72
SCARB2-216ENST00000639300 ETDCA0A1B0GVM5 59 aa10.52□□□□□ -0.72
SCARB2-216ENST00000639300 CXCL5P42830 114 aa10.52□□□□□ -0.72
SCARB2-216ENST00000639300 SMR3AQ99954 134 aa10.52□□□□□ -0.72
SCARB2-216ENST00000639300 SS18L2Q9UHA2 77 aa10.52□□□□□ -0.72
SCARB2-216ENST00000639300 TRACP01848 142 aa10.52□□□□□ -0.73
SCARB2-216ENST00000639300 IGHV4-28A0A0C4DH34 117 aa10.51□□□□□ -0.73
SCARB2-216ENST00000639300 hADV29S1A0JD25 119 aa10.51□□□□□ -0.73
SCARB2-216ENST00000639300 POM121L12Q8N7R1 296 aa10.51□□□□□ -0.73
SCARB2-216ENST00000639300 FAM110AQ9BQ89 295 aa10.51□□□□□ -0.73
SCARB2-216ENST00000639300 LINC00526Q96FQ7 95 aa10.51□□□□□ -0.73
SCARB2-216ENST00000639300 LAMA1P25391 3075 aa10.51□□□□□ -0.73
SCARB2-216ENST00000639300 SLPIP03973 132 aa10.5□□□□□ -0.73
SCARB2-216ENST00000639300 VCANP13611 3396 aa10.5□□□□□ -0.73
SCARB2-216ENST00000639300 CELSR3Q9NYQ7 3312 aa10.5□□□□□ -0.73
SCARB2-216ENST00000639300 LY6G6DO95868 133 aa10.5□□□□□ -0.73
SCARB2-216ENST00000639300 XAGE1AQ9HD64 81 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms