RNA–Protein interactions for RNA: ENST00000637815.1

CTSD-212, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 2,003 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-212ENST00000637815 VSIG2Q96IQ7 327 aa13.18□□□□□ -0.3
CTSD-212ENST00000637815 A0A0J9YXY3 114 aa13.18□□□□□ -0.3
CTSD-212ENST00000637815 TSPAN13O95857 204 aa13.18□□□□□ -0.3
CTSD-212ENST00000637815 PF4P02776 101 aa13.18□□□□□ -0.3
CTSD-212ENST00000637815 CFC1BP0CG36 223 aa13.18□□□□□ -0.3
CTSD-212ENST00000637815 CFC1P0CG37 223 aa13.18□□□□□ -0.3
CTSD-212ENST00000637815 NTM-AS1Q6ZSK4 140 aa13.18□□□□□ -0.3
CTSD-212ENST00000637815 CSDC2Q9Y534 153 aaKnown RBP13.18□□□□□ -0.3
CTSD-212ENST00000637815 IGLV5-45A0A087WSX0 123 aa13.17□□□□□ -0.3
CTSD-212ENST00000637815 TMEM238C9JI98 176 aa13.17□□□□□ -0.3
CTSD-212ENST00000637815 APOMO95445 188 aa13.17□□□□□ -0.3
CTSD-212ENST00000637815 TIRAPP58753 221 aa13.17□□□□□ -0.3
CTSD-212ENST00000637815 DGAT2L7PQ6IED9 249 aa13.17□□□□□ -0.3
CTSD-212ENST00000637815 SBSPONQ8IVN8 264 aa13.17□□□□□ -0.3
CTSD-212ENST00000637815 GEMIN7Q9H840 131 aaKnown RBP13.17□□□□□ -0.3
CTSD-212ENST00000637815 NSD1Q96L73 2696 aaPredicted RBP13.16□□□□□ -0.3
CTSD-212ENST00000637815 GAGE7O76087 117 aa13.16□□□□□ -0.3
CTSD-212ENST00000637815 GAGE12FP0CL80 117 aa13.16□□□□□ -0.3
CTSD-212ENST00000637815 GAGE12GP0CL81 117 aa13.16□□□□□ -0.3
CTSD-212ENST00000637815 GAGE12IP0CL82 117 aa13.16□□□□□ -0.3
CTSD-212ENST00000637815 LINC00694P0DN24 101 aa13.16□□□□□ -0.3
CTSD-212ENST00000637815 TRGV2A0A075B6R0 118 aa13.15□□□□□ -0.3
CTSD-212ENST00000637815 F8W1H4 67 aa13.15□□□□□ -0.3
CTSD-212ENST00000637815 H3BMG7 143 aa13.15□□□□□ -0.3
CTSD-212ENST00000637815 RNF151Q2KHN1 245 aa13.15□□□□□ -0.3
CTSD-212ENST00000637815 TRBV6-4A0A1B0GX49 114 aa13.15□□□□□ -0.3
CTSD-212ENST00000637815 GAGE12JA6NER3 117 aa13.15□□□□□ -0.3
CTSD-212ENST00000637815 SPINK8P0C7L1 97 aa13.15□□□□□ -0.3
CTSD-212ENST00000637815 GAGE4Q13068 117 aa13.15□□□□□ -0.3
CTSD-212ENST00000637815 GAGE5Q13069 117 aa13.15□□□□□ -0.3
CTSD-212ENST00000637815 GAGE13Q4V321 117 aa13.15□□□□□ -0.3
CTSD-212ENST00000637815 FAM19A3Q7Z5A8 133 aa13.15□□□□□ -0.3
CTSD-212ENST00000637815 LITAFQ99732 161 aa13.15□□□□□ -0.3
CTSD-212ENST00000637815 GTSF1LQ9H1H1 148 aa13.15□□□□□ -0.3
CTSD-212ENST00000637815 C2CD3Q4AC94 2353 aa13.15□□□□□ -0.31
CTSD-212ENST00000637815 CDKN2A-AS1Q9UH64 79 aa13.14□□□□□ -0.31
CTSD-212ENST00000637815 NDUFA12Q9UI09 145 aa13.14□□□□□ -0.31
CTSD-212ENST00000637815 FN1P02751 2386 aaKnown RBP13.14□□□□□ -0.31
CTSD-212ENST00000637815 RPL24P83731 157 aaKnown RBP13.13□□□□□ -0.31
CTSD-212ENST00000637815 NOTCH2Q04721 2471 aa13.13□□□□□ -0.31
CTSD-212ENST00000637815 A4D1N5 150 aa13.13□□□□□ -0.31
CTSD-212ENST00000637815 SMAGPQ0VAQ4 97 aa13.13□□□□□ -0.31
CTSD-212ENST00000637815 PRO1854Q9UHT4 67 aa13.13□□□□□ -0.31
CTSD-212ENST00000637815 ZFAND6Q6FIF0 208 aa13.12□□□□□ -0.31
CTSD-212ENST00000637815 MUSTN1Q8IVN3 82 aa13.12□□□□□ -0.31
CTSD-212ENST00000637815 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.12□□□□□ -0.31
CTSD-212ENST00000637815 HERVK_113P63121 156 aa13.12□□□□□ -0.31
CTSD-212ENST00000637815 INAFM1C9JVW0 142 aa13.11□□□□□ -0.31
CTSD-212ENST00000637815 G3V4G9 280 aa13.11□□□□□ -0.31
CTSD-212ENST00000637815 LINC00242Q5T6M2 205 aa13.11□□□□□ -0.31
CTSD-212ENST00000637815 PRO0461Q9UI25 63 aa13.11□□□□□ -0.31
CTSD-212ENST00000637815 VWFP04275 2813 aa13.1□□□□□ -0.31
CTSD-212ENST00000637815 A0A0B4J2C4 111 aa13.1□□□□□ -0.31
CTSD-212ENST00000637815 A8MZ25 164 aa13.1□□□□□ -0.31
CTSD-212ENST00000637815 EIF4EBP3O60516 100 aaPredicted RBP13.1□□□□□ -0.31
CTSD-212ENST00000637815 COX6A2Q02221 97 aa13.1□□□□□ -0.31
CTSD-212ENST00000637815 LYRM7Q5U5X0 104 aa13.1□□□□□ -0.31
CTSD-212ENST00000637815 SPANXDQ9BXN6 97 aa13.1□□□□□ -0.31
CTSD-212ENST00000637815 CDC42SE2Q9NRR3 84 aa13.1□□□□□ -0.31
CTSD-212ENST00000637815 SPANXCQ9NY87 97 aa13.1□□□□□ -0.31
CTSD-212ENST00000637815 INSL3P51460 131 aa13.1□□□□□ -0.31
CTSD-212ENST00000637815 WFDC2Q14508 124 aa13.1□□□□□ -0.31
CTSD-212ENST00000637815 TRGV4A0A0C4DH28 118 aa13.09□□□□□ -0.31
CTSD-212ENST00000637815 LOC100131303A0A0U1RQF7 123 aa13.09□□□□□ -0.31
CTSD-212ENST00000637815 FHL2Q14192 279 aa13.09□□□□□ -0.31
CTSD-212ENST00000637815 TMEM101Q96IK0 257 aa13.09□□□□□ -0.31
CTSD-212ENST00000637815 TMEM243Q9BU79 118 aa13.09□□□□□ -0.31
CTSD-212ENST00000637815 LOC107984156A0A0G2JMH3 177 aa13.08□□□□□ -0.31
CTSD-212ENST00000637815 IGLV5-39A0A0G2JS06 123 aa13.08□□□□□ -0.31
CTSD-212ENST00000637815 ARL17AQ8IVW1 177 aa13.08□□□□□ -0.31
CTSD-212ENST00000637815 VPS25Q9BRG1 176 aa13.08□□□□□ -0.31
CTSD-212ENST00000637815 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.08□□□□□ -0.32
CTSD-212ENST00000637815 H7C423 109 aa13.08□□□□□ -0.32
CTSD-212ENST00000637815 NDUFA1O15239 70 aa13.07□□□□□ -0.32
CTSD-212ENST00000637815 TIMM17BO60830 172 aa13.07□□□□□ -0.32
CTSD-212ENST00000637815 ADAMTSL4-AS1Q5T5F5 129 aa13.07□□□□□ -0.32
CTSD-212ENST00000637815 KIR2DL5BQ8NHK3 375 aa13.07□□□□□ -0.32
CTSD-212ENST00000637815 TEX48A0A1B0GUV7 120 aa13.06□□□□□ -0.32
CTSD-212ENST00000637815 IGHV3-33P01772 117 aa13.06□□□□□ -0.32
CTSD-212ENST00000637815 LINC00612Q8N6U2 182 aa13.06□□□□□ -0.32
CTSD-212ENST00000637815 UBE2L6O14933 153 aa13.06□□□□□ -0.32
CTSD-212ENST00000637815 CRLF1O75462 422 aa13.06□□□□□ -0.32
CTSD-212ENST00000637815 MIAQ16674 131 aa13.06□□□□□ -0.32
CTSD-212ENST00000637815 C9orf66Q5T8R8 295 aa13.06□□□□□ -0.32
CTSD-212ENST00000637815 SFTA2Q6UW10 78 aa13.06□□□□□ -0.32
CTSD-212ENST00000637815 TRAV13-1A0A0B4J241 112 aa13.05□□□□□ -0.32
CTSD-212ENST00000637815 SPATA3Q8NHX4 192 aa13.05□□□□□ -0.32
CTSD-212ENST00000637815 TRBV20-1A0A075B6N2 111 aa13.04□□□□□ -0.32
CTSD-212ENST00000637815 SMIM1B2RUZ4 78 aa13.04□□□□□ -0.32
CTSD-212ENST00000637815 PSMB2P49721 201 aa13.04□□□□□ -0.32
CTSD-212ENST00000637815 MTURNQ8N3F0 131 aa13.03□□□□□ -0.32
CTSD-212ENST00000637815 HIVEP1P15822 2718 aa13.03□□□□□ -0.32
CTSD-212ENST00000637815 TENM1Q9UKZ4 2725 aa13.03□□□□□ -0.32
CTSD-212ENST00000637815 RNF183Q96D59 192 aa13.03□□□□□ -0.32
CTSD-212ENST00000637815 ERG28Q9UKR5 140 aa13.03□□□□□ -0.32
CTSD-212ENST00000637815 X6R8D5 127 aa13.03□□□□□ -0.32
CTSD-212ENST00000637815 SMIM9A6NGZ8 99 aa13.02□□□□□ -0.33
CTSD-212ENST00000637815 F5H768 121 aa13.02□□□□□ -0.33
CTSD-212ENST00000637815 TCL1BO95988 128 aa13.02□□□□□ -0.33
CTSD-212ENST00000637815 PRSS2P07478 247 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms