RNA–Protein interactions for RNA: ENST00000636271.1

CHRNA7-212, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 1,974 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-212ENST00000636271 CEMP1Q6PRD7 247 aaPredicted RBP11.17□□□□□ -0.62
CHRNA7-212ENST00000636271 ZNF479Q96JC4 524 aa11.17□□□□□ -0.62
CHRNA7-212ENST00000636271 C1QTNF4Q9BXJ3 329 aa11.17□□□□□ -0.62
CHRNA7-212ENST00000636271 UBE2D4Q9Y2X8 147 aa11.17□□□□□ -0.62
CHRNA7-212ENST00000636271 J3QQQ9 107 aa11.17□□□□□ -0.62
CHRNA7-212ENST00000636271 C12orf74Q32Q52 190 aa11.17□□□□□ -0.62
CHRNA7-212ENST00000636271 TRAV4A0A0B4J268 109 aa11.16□□□□□ -0.62
CHRNA7-212ENST00000636271 GAGE12BA1L429 117 aa11.16□□□□□ -0.62
CHRNA7-212ENST00000636271 FABP2P12104 132 aa11.16□□□□□ -0.62
CHRNA7-212ENST00000636271 DAZ2Q13117 558 aaKnown RBP11.16□□□□□ -0.62
CHRNA7-212ENST00000636271 C16orf74Q96GX8 76 aa11.16□□□□□ -0.62
CHRNA7-212ENST00000636271 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.16□□□□□ -0.62
CHRNA7-212ENST00000636271 A0A0J9YY99 117 aa11.16□□□□□ -0.62
CHRNA7-212ENST00000636271 IGKV2-29A2NJV5 120 aaPredicted RBP11.16□□□□□ -0.62
CHRNA7-212ENST00000636271 LEPROTO15243 131 aa11.16□□□□□ -0.62
CHRNA7-212ENST00000636271 LGALS3P17931 250 aaKnown RBP11.16□□□□□ -0.62
CHRNA7-212ENST00000636271 MRPS36P82909 103 aaKnown RBP11.16□□□□□ -0.62
CHRNA7-212ENST00000636271 SRSF9Q13242 221 aaKnown RBP eCLIP11.16□□□□□ -0.62
CHRNA7-212ENST00000636271 KPRPQ5T749 579 aaPredicted RBP11.16□□□□□ -0.62
CHRNA7-212ENST00000636271 VPS25Q9BRG1 176 aa11.16□□□□□ -0.62
CHRNA7-212ENST00000636271 NOP10Q9NPE3 64 aaKnown RBP11.16□□□□□ -0.62
CHRNA7-212ENST00000636271 SPCS1Q9Y6A9 102 aa11.15□□□□□ -0.62
CHRNA7-212ENST00000636271 TRBV10-1A0A0K0K1A3 114 aa11.14□□□□□ -0.63
CHRNA7-212ENST00000636271 A0A1B0GWB2 263 aa11.14□□□□□ -0.63
CHRNA7-212ENST00000636271 PLAC8L1A1L4L8 177 aa11.14□□□□□ -0.63
CHRNA7-212ENST00000636271 K7EQD1 137 aa11.14□□□□□ -0.63
CHRNA7-212ENST00000636271 RNASE13Q5GAN3 156 aaKnown RBP11.14□□□□□ -0.63
CHRNA7-212ENST00000636271 OR5A1Q8NGJ0 315 aa11.14□□□□□ -0.63
CHRNA7-212ENST00000636271 TMEM238LA0A1B0GVL6 79 aa11.13□□□□□ -0.63
CHRNA7-212ENST00000636271 A6NJY4 79 aa11.13□□□□□ -0.63
CHRNA7-212ENST00000636271 IGLL5B9A064 214 aa11.13□□□□□ -0.63
CHRNA7-212ENST00000636271 RPL36AP83881 106 aaKnown RBP11.13□□□□□ -0.63
CHRNA7-212ENST00000636271 KIR2DL5BQ8NHK3 375 aa11.13□□□□□ -0.63
CHRNA7-212ENST00000636271 RPL36ALQ969Q0 106 aaKnown RBP11.13□□□□□ -0.63
CHRNA7-212ENST00000636271 SPANXB1Q9NS25 103 aaPredicted RBP11.13□□□□□ -0.63
CHRNA7-212ENST00000636271 A8MZ25 164 aa11.12□□□□□ -0.63
CHRNA7-212ENST00000636271 RNF151Q2KHN1 245 aa11.12□□□□□ -0.63
CHRNA7-212ENST00000636271 IGHV3-64A0A075B6Q5 118 aa11.12□□□□□ -0.63
CHRNA7-212ENST00000636271 APOC4P55056 127 aa11.12□□□□□ -0.63
CHRNA7-212ENST00000636271 RRN3P1Q2M238 152 aa11.12□□□□□ -0.63
CHRNA7-212ENST00000636271 Q6ZUT4 128 aa11.12□□□□□ -0.63
CHRNA7-212ENST00000636271 SLC25A29Q8N8R3 303 aa11.12□□□□□ -0.63
CHRNA7-212ENST00000636271 K7EIL1 84 aa11.11□□□□□ -0.63
CHRNA7-212ENST00000636271 DEFB135Q30KP9 77 aa11.11□□□□□ -0.63
CHRNA7-212ENST00000636271 TINCRA0A1B0GVN0 87 aa11.1□□□□□ -0.63
CHRNA7-212ENST00000636271 DAZ4Q86SG3 579 aaKnown RBP11.1□□□□□ -0.63
CHRNA7-212ENST00000636271 OVOL2Q9BRP0 275 aa11.1□□□□□ -0.63
CHRNA7-212ENST00000636271 TIMM21Q9BVV7 248 aa11.1□□□□□ -0.63
CHRNA7-212ENST00000636271 DAZ3Q9NR90 486 aaKnown RBP11.1□□□□□ -0.63
CHRNA7-212ENST00000636271 TRGV2A0A075B6R0 118 aa11.1□□□□□ -0.63
CHRNA7-212ENST00000636271 GAGE7O76087 117 aa11.1□□□□□ -0.63
CHRNA7-212ENST00000636271 GAGE12FP0CL80 117 aa11.1□□□□□ -0.63
CHRNA7-212ENST00000636271 GAGE12GP0CL81 117 aa11.1□□□□□ -0.63
CHRNA7-212ENST00000636271 GAGE12IP0CL82 117 aa11.1□□□□□ -0.63
CHRNA7-212ENST00000636271 UBE2D1P51668 147 aa11.09□□□□□ -0.63
CHRNA7-212ENST00000636271 UBE2D3P61077 147 aa11.09□□□□□ -0.63
CHRNA7-212ENST00000636271 UBE2D2P62837 147 aa11.09□□□□□ -0.63
CHRNA7-212ENST00000636271 CIDEAO60543 219 aa11.08□□□□□ -0.64
CHRNA7-212ENST00000636271 IGHV3-30P01768 117 aa11.08□□□□□ -0.64
CHRNA7-212ENST00000636271 IGHV3-30-3P0DP02 117 aa11.08□□□□□ -0.64
CHRNA7-212ENST00000636271 IGHV3-30-5P0DP03 117 aa11.08□□□□□ -0.64
CHRNA7-212ENST00000636271 DGAT2L7PQ6IED9 249 aa11.08□□□□□ -0.64
CHRNA7-212ENST00000636271 GAGE12JA6NER3 117 aa11.08□□□□□ -0.64
CHRNA7-212ENST00000636271 GAGE4Q13068 117 aa11.08□□□□□ -0.64
CHRNA7-212ENST00000636271 GAGE5Q13069 117 aa11.08□□□□□ -0.64
CHRNA7-212ENST00000636271 GAGE13Q4V321 117 aa11.08□□□□□ -0.64
CHRNA7-212ENST00000636271 X6R8D5 127 aa11.08□□□□□ -0.64
CHRNA7-212ENST00000636271 NTM-AS1Q6ZSK4 140 aa11.07□□□□□ -0.64
CHRNA7-212ENST00000636271 IGHV1-58A0A0C4DH39 117 aa11.07□□□□□ -0.64
CHRNA7-212ENST00000636271 GEMIN7Q9H840 131 aaKnown RBP11.07□□□□□ -0.64
CHRNA7-212ENST00000636271 TRAV8-3A0A0A6YYJ7 113 aa11.06□□□□□ -0.64
CHRNA7-212ENST00000636271 TRBV6-4A0A1B0GX49 114 aa11.05□□□□□ -0.64
CHRNA7-212ENST00000636271 LINC00694P0DN24 101 aa11.05□□□□□ -0.64
CHRNA7-212ENST00000636271 C10orf126Q8N4M7 172 aa11.05□□□□□ -0.64
CHRNA7-212ENST00000636271 PGPEP1Q9NXJ5 209 aa11.05□□□□□ -0.64
CHRNA7-212ENST00000636271 CSDC2Q9Y534 153 aaKnown RBP11.05□□□□□ -0.64
CHRNA7-212ENST00000636271 DEFB121Q5J5C9 76 aa11.05□□□□□ -0.64
CHRNA7-212ENST00000636271 RNF183Q96D59 192 aa11.05□□□□□ -0.64
CHRNA7-212ENST00000636271 VSIG2Q96IQ7 327 aa11.05□□□□□ -0.64
CHRNA7-212ENST00000636271 TRGV4A0A0C4DH28 118 aa11.04□□□□□ -0.64
CHRNA7-212ENST00000636271 TMEM238C9JI98 176 aa11.04□□□□□ -0.64
CHRNA7-212ENST00000636271 TIRAPP58753 221 aa11.04□□□□□ -0.64
CHRNA7-212ENST00000636271 SBSPONQ8IVN8 264 aa11.04□□□□□ -0.64
CHRNA7-212ENST00000636271 GTSF1LQ9H1H1 148 aa11.04□□□□□ -0.64
CHRNA7-212ENST00000636271 RETNQ9HD89 108 aa11.04□□□□□ -0.64
CHRNA7-212ENST00000636271 A0A0J9YXY3 114 aa11.03□□□□□ -0.64
CHRNA7-212ENST00000636271 APOMO95445 188 aa11.03□□□□□ -0.64
CHRNA7-212ENST00000636271 SPINK8P0C7L1 97 aa11.03□□□□□ -0.64
CHRNA7-212ENST00000636271 SMAGPQ0VAQ4 97 aa11.03□□□□□ -0.64
CHRNA7-212ENST00000636271 IGLV5-45A0A087WSX0 123 aa11.03□□□□□ -0.64
CHRNA7-212ENST00000636271 LOC100131303A0A0U1RQF7 123 aa11.02□□□□□ -0.65
CHRNA7-212ENST00000636271 CDKN2A-AS1Q9UH64 79 aa11.02□□□□□ -0.65
CHRNA7-212ENST00000636271 DEFB4AO15263 64 aa11.01□□□□□ -0.65
CHRNA7-212ENST00000636271 CFC1BP0CG36 223 aa11.01□□□□□ -0.65
CHRNA7-212ENST00000636271 CFC1P0CG37 223 aa11.01□□□□□ -0.65
CHRNA7-212ENST00000636271 FHL2Q14192 279 aa11.01□□□□□ -0.65
CHRNA7-212ENST00000636271 MRAPQ8TCY5 172 aa11.01□□□□□ -0.65
CHRNA7-212ENST00000636271 NDUFA12Q9UI09 145 aa11.01□□□□□ -0.65
CHRNA7-212ENST00000636271 TENM3Q9P273 2699 aa11.01□□□□□ -0.65
CHRNA7-212ENST00000636271 TSPAN13O95857 204 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms