RNA–Protein interactions for RNA: ENST00000627049.2

FARP1-242, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5 BASIC

Gene FARP1, Length 5,103 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-242ENST00000627049 SMCPP49901 116 aaPredicted RBP13.07□□□□□ -0.32
FARP1-242ENST00000627049 NKAPP1Q8N9T2 125 aa13.06□□□□□ -0.32
FARP1-242ENST00000627049 Q6ZTI0 123 aa13.06□□□□□ -0.32
FARP1-242ENST00000627049 M0QXV9 152 aa13.05□□□□□ -0.32
FARP1-242ENST00000627049 RPL18AQ02543 176 aaKnown RBP13.05□□□□□ -0.32
FARP1-242ENST00000627049 SERP2Q8N6R1 65 aa13.05□□□□□ -0.32
FARP1-242ENST00000627049 NCR3O14931 201 aa13.05□□□□□ -0.32
FARP1-242ENST00000627049 DCANP1Q8TF63 244 aa13.05□□□□□ -0.32
FARP1-242ENST00000627049 H3BQ85 93 aa13.05□□□□□ -0.32
FARP1-242ENST00000627049 SLPIP03973 132 aa13.05□□□□□ -0.32
FARP1-242ENST00000627049 CXCL5P42830 114 aa13.04□□□□□ -0.32
FARP1-242ENST00000627049 FAM222AQ5U5X8 452 aa13.04□□□□□ -0.32
FARP1-242ENST00000627049 UPK3BQ9BT76 320 aa13.04□□□□□ -0.32
FARP1-242ENST00000627049 SVIPQ8NHG7 77 aa13.04□□□□□ -0.32
FARP1-242ENST00000627049 ATRXP46100 2492 aa13.04□□□□□ -0.32
FARP1-242ENST00000627049 IBA57-AS1B1ANH7 110 aa13.03□□□□□ -0.32
FARP1-242ENST00000627049 APOC4P55056 127 aa13.03□□□□□ -0.32
FARP1-242ENST00000627049 ATP5EP2Q5VTU8 51 aa13.03□□□□□ -0.32
FARP1-242ENST00000627049 Q6ZSV7 163 aa13.02□□□□□ -0.32
FARP1-242ENST00000627049 USP17L23D6RBM5 183 aa13.02□□□□□ -0.32
FARP1-242ENST00000627049 CACNA1AO00555 2505 aa13.02□□□□□ -0.33
FARP1-242ENST00000627049 LINC00694P0DN24 101 aa13.02□□□□□ -0.33
FARP1-242ENST00000627049 PDE6GP18545 87 aa13.01□□□□□ -0.33
FARP1-242ENST00000627049 MYO9AB2RTY4 2548 aa13.01□□□□□ -0.33
FARP1-242ENST00000627049 ADAMTSL4-AS1Q5T5F5 129 aa13.01□□□□□ -0.33
FARP1-242ENST00000627049 ZNF580Q9UK33 172 aa13.01□□□□□ -0.33
FARP1-242ENST00000627049 C4orf3Q8WVX3 66 aa13□□□□□ -0.33
FARP1-242ENST00000627049 CUL9Q8IWT3 2517 aa13□□□□□ -0.33
FARP1-242ENST00000627049 LRRC75A-AS1Q8N1F1 130 aa13□□□□□ -0.33
FARP1-242ENST00000627049 PRB1P04280 392 aa12.99□□□□□ -0.33
FARP1-242ENST00000627049 ENHOQ6UWT2 76 aa12.99□□□□□ -0.33
FARP1-242ENST00000627049 NREPQ16612 68 aa12.99□□□□□ -0.33
FARP1-242ENST00000627049 DEFB113Q30KQ7 82 aa12.99□□□□□ -0.33
FARP1-242ENST00000627049 C10orf99Q6UWK7 81 aa12.99□□□□□ -0.33
FARP1-242ENST00000627049 RAI1Q7Z5J4 1906 aaPredicted RBP12.98□□□□□ -0.33
FARP1-242ENST00000627049 FAM236DA0A1B0GTK5 79 aa12.98□□□□□ -0.33
FARP1-242ENST00000627049 FAM236CP0DP71 79 aa12.98□□□□□ -0.33
FARP1-242ENST00000627049 PTPRBP23467 1997 aa12.98□□□□□ -0.33
FARP1-242ENST00000627049 FAM110AQ9BQ89 295 aa12.98□□□□□ -0.33
FARP1-242ENST00000627049 A0A0C4DFX4 3053 aa12.98□□□□□ -0.33
FARP1-242ENST00000627049 PRO3102Q9H379 93 aa12.98□□□□□ -0.33
FARP1-242ENST00000627049 IGLV1-40P01703 118 aa12.97□□□□□ -0.33
FARP1-242ENST00000627049 LINC00526Q96FQ7 95 aa12.97□□□□□ -0.33
FARP1-242ENST00000627049 DEFB105AQ8NG35 78 aa12.96□□□□□ -0.33
FARP1-242ENST00000627049 AMELXQ99217 191 aa12.96□□□□□ -0.33
FARP1-242ENST00000627049 NDUFC2O95298 119 aa12.96□□□□□ -0.34
FARP1-242ENST00000627049 SPAG11BQ08648 103 aa12.96□□□□□ -0.34
FARP1-242ENST00000627049 SMIM11BQ8TCY0 68 aa12.96□□□□□ -0.34
FARP1-242ENST00000627049 DIRC1Q969H9 104 aa12.96□□□□□ -0.34
FARP1-242ENST00000627049 PRM2P04554 102 aa12.95□□□□□ -0.34
FARP1-242ENST00000627049 NRGNQ92686 78 aa12.95□□□□□ -0.34
FARP1-242ENST00000627049 FUSP35637 526 aaKnown RBP eCLIP12.95□□□□□ -0.344e-7■■□□□ 14
FARP1-242ENST00000627049 DEFB114Q30KQ6 69 aa12.95□□□□□ -0.34
FARP1-242ENST00000627049 LINC00242Q5T6M2 205 aa12.94□□□□□ -0.34
FARP1-242ENST00000627049 CAMK2N2Q96S95 79 aa12.94□□□□□ -0.34
FARP1-242ENST00000627049 KIF25-AS1Q9Y6Z4 181 aa12.94□□□□□ -0.34
FARP1-242ENST00000627049 Q6JHZ5 121 aa12.93□□□□□ -0.34
FARP1-242ENST00000627049 RMI2Q96E14 147 aa12.92□□□□□ -0.34
FARP1-242ENST00000627049 NOTCH2Q04721 2471 aa12.92□□□□□ -0.34
FARP1-242ENST00000627049 ESM1Q9NQ30 184 aa12.92□□□□□ -0.34
FARP1-242ENST00000627049 PRRC2AP48634 2157 aaKnown RBP12.92□□□□□ -0.34
FARP1-242ENST00000627049 EDN2P20800 178 aa12.91□□□□□ -0.34
FARP1-242ENST00000627049 PRO0255Q9UI72 69 aa12.91□□□□□ -0.34
FARP1-242ENST00000627049 CHCHD7Q9BUK0 85 aa12.91□□□□□ -0.34
FARP1-242ENST00000627049 TRBV6-8A0A0A6YYG3 113 aa12.9□□□□□ -0.34
FARP1-242ENST00000627049 SBSPONQ8IVN8 264 aa12.9□□□□□ -0.34
FARP1-242ENST00000627049 C19orf84I3L1E1 186 aa12.9□□□□□ -0.34
FARP1-242ENST00000627049 SMIM1B2RUZ4 78 aa12.89□□□□□ -0.35
FARP1-242ENST00000627049 IGF2RP11717 2491 aa12.89□□□□□ -0.35
FARP1-242ENST00000627049 TRBV6-4A0A1B0GX49 114 aa12.89□□□□□ -0.35
FARP1-242ENST00000627049 HIGD2BQ4VC39 106 aa12.89□□□□□ -0.35
FARP1-242ENST00000627049 CDC42SE2Q9NRR3 84 aa12.89□□□□□ -0.35
FARP1-242ENST00000627049 IGHV4-28A0A0C4DH34 117 aa12.89□□□□□ -0.35
FARP1-242ENST00000627049 TRBV7-7A0A0K0K1E9 115 aa12.89□□□□□ -0.35
FARP1-242ENST00000627049 CDK2AP2O75956 126 aa12.89□□□□□ -0.35
FARP1-242ENST00000627049 C6orf99Q4VX62 202 aa12.89□□□□□ -0.35
FARP1-242ENST00000627049 RPL28P46779 137 aaKnown RBP12.88□□□□□ -0.35
FARP1-242ENST00000627049 PRRC2CQ9Y520 2896 aaKnown RBP12.88□□□□□ -0.35
FARP1-242ENST00000627049 CCL18P55774 89 aa12.87□□□□□ -0.35
FARP1-242ENST00000627049 BRK1Q8WUW1 75 aa12.87□□□□□ -0.35
FARP1-242ENST00000627049 COX7BP24311 80 aa12.87□□□□□ -0.35
FARP1-242ENST00000627049 LINC00269Q8N2A0 174 aa12.87□□□□□ -0.35
FARP1-242ENST00000627049 LINC00315P59091 139 aa12.86□□□□□ -0.35
FARP1-242ENST00000627049 COX6A2Q02221 97 aa12.86□□□□□ -0.35
FARP1-242ENST00000627049 SMIM9A6NGZ8 99 aa12.86□□□□□ -0.35
FARP1-242ENST00000627049 CDSNQ15517 529 aa12.86□□□□□ -0.35
FARP1-242ENST00000627049 Q6YL49 198 aa12.86□□□□□ -0.35
FARP1-242ENST00000627049 KLK12Q9UKR0 248 aa12.85□□□□□ -0.35
FARP1-242ENST00000627049 IGKV2D-24A0A075B6R9 120 aa12.85□□□□□ -0.35
FARP1-242ENST00000627049 A0A087WVE0 104 aa12.84□□□□□ -0.35
FARP1-242ENST00000627049 C9orf66Q5T8R8 295 aa12.84□□□□□ -0.35
FARP1-242ENST00000627049 CITED2Q99967 270 aaPredicted RBP12.84□□□□□ -0.35
FARP1-242ENST00000627049 NAV2Q8IVL1 2488 aa12.84□□□□□ -0.35
FARP1-242ENST00000627049 CHCHD10Q8WYQ3 142 aaPredicted RBP12.84□□□□□ -0.35
FARP1-242ENST00000627049 ETDCA0A1B0GVM5 59 aa12.83□□□□□ -0.35
FARP1-242ENST00000627049 SPART-AS1P0CW21 52 aa12.83□□□□□ -0.35
FARP1-242ENST00000627049 KLK5Q9Y337 293 aaPredicted RBP12.83□□□□□ -0.35
FARP1-242ENST00000627049 BRI3O95415 125 aa12.83□□□□□ -0.36
FARP1-242ENST00000627049 REG3AQ06141 175 aa12.83□□□□□ -0.36
FARP1-242ENST00000627049 PRORYQ9H606 182 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms