RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 A8MZ25 164 aa9.49□□□□□ -0.89
MSH6-215ENST00000622629 ZMAT4Q9H898 229 aa9.49□□□□□ -0.89
MSH6-215ENST00000622629 ESM1Q9NQ30 184 aa9.49□□□□□ -0.89
MSH6-215ENST00000622629 TRBV6-5A0A0K0K1A5 114 aa9.49□□□□□ -0.89
MSH6-215ENST00000622629 SOCS3O14543 225 aa9.49□□□□□ -0.89
MSH6-215ENST00000622629 CRIP2P52943 208 aaPredicted RBP9.49□□□□□ -0.89
MSH6-215ENST00000622629 TSHBP01222 138 aa9.48□□□□□ -0.89
MSH6-215ENST00000622629 ICOSQ9Y6W8 199 aa9.48□□□□□ -0.89
MSH6-215ENST00000622629 C9orf85Q96MD7 179 aa9.48□□□□□ -0.89
MSH6-215ENST00000622629 SPANXB1Q9NS25 103 aaPredicted RBP9.48□□□□□ -0.89
MSH6-215ENST00000622629 DAD1P61803 113 aa9.48□□□□□ -0.89
MSH6-215ENST00000622629 DAZ2Q13117 558 aaKnown RBP9.48□□□□□ -0.89
MSH6-215ENST00000622629 DAZ4Q86SG3 579 aaKnown RBP9.48□□□□□ -0.89
MSH6-215ENST00000622629 DAZ3Q9NR90 486 aaKnown RBP9.48□□□□□ -0.89
MSH6-215ENST00000622629 LOC400499M0QZD8 3231 aa9.48□□□□□ -0.89
MSH6-215ENST00000622629 CLEC2BQ92478 149 aa9.47□□□□□ -0.89
MSH6-215ENST00000622629 COL27A1Q8IZC6 1860 aaPredicted RBP9.47□□□□□ -0.89
MSH6-215ENST00000622629 TMEM223A0PJW6 202 aa9.47□□□□□ -0.89
MSH6-215ENST00000622629 IGIPA6NJ69 53 aa9.47□□□□□ -0.89
MSH6-215ENST00000622629 Q6ZSV7 163 aa9.47□□□□□ -0.89
MSH6-215ENST00000622629 NFE4Q86UQ8 179 aa9.47□□□□□ -0.89
MSH6-215ENST00000622629 IFITM1P13164 125 aa9.47□□□□□ -0.89
MSH6-215ENST00000622629 DMDP11532 3685 aa9.47□□□□□ -0.89
MSH6-215ENST00000622629 ANGP03950 147 aaKnown RBP9.47□□□□□ -0.89
MSH6-215ENST00000622629 CFAP126Q5VTH2 177 aa9.47□□□□□ -0.89
MSH6-215ENST00000622629 RPL32P62910 135 aaKnown RBP9.46□□□□□ -0.9
MSH6-215ENST00000622629 UFSP1Q6NVU6 142 aa9.46□□□□□ -0.9
MSH6-215ENST00000622629 C3orf56Q8N813 242 aa9.46□□□□□ -0.9
MSH6-215ENST00000622629 C16orf74Q96GX8 76 aa9.46□□□□□ -0.9
MSH6-215ENST00000622629 CFAP46Q8IYW2 2715 aa9.46□□□□□ -0.9
MSH6-215ENST00000622629 TRAV25A0A0B4J276 109 aa9.45□□□□□ -0.9
MSH6-215ENST00000622629 GYPEP15421 78 aa9.45□□□□□ -0.9
MSH6-215ENST00000622629 C15orf53Q8NAA6 179 aa9.45□□□□□ -0.9
MSH6-215ENST00000622629 CFAP47Q6ZTR5 3102 aa9.45□□□□□ -0.9
MSH6-215ENST00000622629 TMEM263Q8WUH6 116 aaKnown RBP9.45□□□□□ -0.9
MSH6-215ENST00000622629 DEFB4AO15263 64 aa9.45□□□□□ -0.9
MSH6-215ENST00000622629 HELZ2Q9BYK8 2649 aaKnown RBP9.44□□□□□ -0.9
MSH6-215ENST00000622629 IGLV10-54A0A075B6I4 117 aa9.44□□□□□ -0.9
MSH6-215ENST00000622629 C9orf153Q5TBE3 101 aa9.44□□□□□ -0.9
MSH6-215ENST00000622629 INSL3P51460 131 aa9.44□□□□□ -0.9
MSH6-215ENST00000622629 TRAV13-2A0A0B4J235 113 aa9.43□□□□□ -0.9
MSH6-215ENST00000622629 IGHV3-30P01768 117 aa9.43□□□□□ -0.9
MSH6-215ENST00000622629 IGHV3-30-5P0DP03 117 aa9.43□□□□□ -0.9
MSH6-215ENST00000622629 IGSF10Q6WRI0 2623 aa9.43□□□□□ -0.9
MSH6-215ENST00000622629 SND1-IT1Q9HBX3 110 aa9.43□□□□□ -0.9
MSH6-215ENST00000622629 TINCRA0A1B0GVN0 87 aa9.43□□□□□ -0.9
MSH6-215ENST00000622629 ATP6V0E2Q8NHE4 81 aa9.43□□□□□ -0.9
MSH6-215ENST00000622629 A0A0U1RQV1 116 aa9.42□□□□□ -0.9
MSH6-215ENST00000622629 WFDC10AQ9H1F0 79 aa9.42□□□□□ -0.9
MSH6-215ENST00000622629 TRBV10-1A0A0K0K1A3 114 aa9.42□□□□□ -0.9
MSH6-215ENST00000622629 CRLF1O75462 422 aa9.42□□□□□ -0.9
MSH6-215ENST00000622629 BAALC-AS2P0C853 105 aa9.42□□□□□ -0.9
MSH6-215ENST00000622629 MIAQ16674 131 aa9.42□□□□□ -0.9
MSH6-215ENST00000622629 IGHV3-33P01772 117 aa9.42□□□□□ -0.9
MSH6-215ENST00000622629 CHD6Q8TD26 2715 aa9.42□□□□□ -0.9
MSH6-215ENST00000622629 IGLV4-69A0A075B6H9 119 aa9.41□□□□□ -0.9
MSH6-215ENST00000622629 TSPEAR-AS2P59090 65 aa9.41□□□□□ -0.9
MSH6-215ENST00000622629 KALRNO60229 2985 aa9.41□□□□□ -0.9
MSH6-215ENST00000622629 MRAPQ8TCY5 172 aa9.41□□□□□ -0.9
MSH6-215ENST00000622629 LAMTOR3Q9UHA4 124 aa9.41□□□□□ -0.9
MSH6-215ENST00000622629 RS1O15537 224 aa9.41□□□□□ -0.9
MSH6-215ENST00000622629 HIST1H4AP62805 103 aaKnown RBP9.41□□□□□ -0.9
MSH6-215ENST00000622629 INAFM2P0DMQ5 153 aa9.4□□□□□ -0.9
MSH6-215ENST00000622629 MIR7-3HGQ8N6C7 128 aa9.4□□□□□ -0.9
MSH6-215ENST00000622629 COX7B2Q8TF08 81 aa9.4□□□□□ -0.9
MSH6-215ENST00000622629 RNF183Q96D59 192 aa9.4□□□□□ -0.9
MSH6-215ENST00000622629 A0A0B4J2C4 111 aa9.4□□□□□ -0.9
MSH6-215ENST00000622629 TRBV10-2A0A0K0K1G8 114 aa9.4□□□□□ -0.9
MSH6-215ENST00000622629 ZNF580Q9UK33 172 aa9.4□□□□□ -0.9
MSH6-215ENST00000622629 ATMQ13315 3056 aa9.4□□□□□ -0.9
MSH6-215ENST00000622629 TRAV4A0A0B4J268 109 aa9.4□□□□□ -0.9
MSH6-215ENST00000622629 OVOL2Q9BRP0 275 aa9.4□□□□□ -0.9
MSH6-215ENST00000622629 PYGO1Q9Y3Y4 419 aa9.39□□□□□ -0.91
MSH6-215ENST00000622629 DEFB135Q30KP9 77 aa9.39□□□□□ -0.91
MSH6-215ENST00000622629 TRIAP1O43715 76 aa9.39□□□□□ -0.91
MSH6-215ENST00000622629 KIF25-AS1Q9Y6Z4 181 aa9.38□□□□□ -0.91
MSH6-215ENST00000622629 TEX49A0A1B0GTD5 131 aa9.38□□□□□ -0.91
MSH6-215ENST00000622629 BRI3O95415 125 aa9.38□□□□□ -0.91
MSH6-215ENST00000622629 MT-ATP8P03928 68 aa9.38□□□□□ -0.91
MSH6-215ENST00000622629 LRRC75A-AS1Q8N1F1 130 aa9.38□□□□□ -0.91
MSH6-215ENST00000622629 EDA2RQ9HAV5 297 aa9.38□□□□□ -0.91
MSH6-215ENST00000622629 APOC4P55056 127 aa9.37□□□□□ -0.91
MSH6-215ENST00000622629 TACC2O95359 2948 aa9.37□□□□□ -0.91
MSH6-215ENST00000622629 ODF3L2Q3SX64 289 aa9.37□□□□□ -0.91
MSH6-215ENST00000622629 UBE2D4Q9Y2X8 147 aa9.37□□□□□ -0.91
MSH6-215ENST00000622629 NDUFA7O95182 113 aa9.36□□□□□ -0.91
MSH6-215ENST00000622629 PIK3CD-AS1Q5SR53 167 aa9.36□□□□□ -0.91
MSH6-215ENST00000622629 UBE2D1P51668 147 aa9.36□□□□□ -0.91
MSH6-215ENST00000622629 SMR3AQ99954 134 aa9.36□□□□□ -0.91
MSH6-215ENST00000622629 MRPL55Q7Z7F7 128 aaKnown RBP9.36□□□□□ -0.91
MSH6-215ENST00000622629 LOC100131303A0A0U1RQF7 123 aa9.35□□□□□ -0.91
MSH6-215ENST00000622629 LINC00315P59091 139 aa9.35□□□□□ -0.91
MSH6-215ENST00000622629 LINC01006Q8NI28 216 aa9.35□□□□□ -0.91
MSH6-215ENST00000622629 F8P00451 2351 aa9.35□□□□□ -0.91
MSH6-215ENST00000622629 J3KT08 172 aa9.35□□□□□ -0.91
MSH6-215ENST00000622629 FAM110AQ9BQ89 295 aa9.35□□□□□ -0.91
MSH6-215ENST00000622629 Q9HAA7 133 aa9.35□□□□□ -0.91
MSH6-215ENST00000622629 H3BT86 120 aa9.35□□□□□ -0.91
MSH6-215ENST00000622629 ZZEF1O43149 2961 aa9.34□□□□□ -0.91
MSH6-215ENST00000622629 MUC4Q99102 2169 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms