RNA–Protein interactions for RNA: ENST00000622454.4

EPB42-210, Transcript of erythrocyte membrane protein band 4.2, humanhuman

TSL 1 (best) BASIC

Gene EPB42, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB42-210ENST00000622454 SAMD5Q5TGI4 173 aa9.96□□□□□ -0.82
EPB42-210ENST00000622454 Q6ZUT4 128 aa9.96□□□□□ -0.82
EPB42-210ENST00000622454 GTF2H5Q6ZYL4 71 aa9.96□□□□□ -0.82
EPB42-210ENST00000622454 TINCRA0A1B0GVN0 87 aa9.95□□□□□ -0.82
EPB42-210ENST00000622454 C12orf74Q32Q52 190 aa9.95□□□□□ -0.82
EPB42-210ENST00000622454 DGAT2L7PQ6IED9 249 aa9.95□□□□□ -0.82
EPB42-210ENST00000622454 CITED1Q99966 193 aa9.95□□□□□ -0.82
EPB42-210ENST00000622454 TRBV6-4A0A1B0GX49 114 aa9.95□□□□□ -0.82
EPB42-210ENST00000622454 GAGE12JA6NER3 117 aa9.95□□□□□ -0.82
EPB42-210ENST00000622454 GAGE4Q13068 117 aa9.95□□□□□ -0.82
EPB42-210ENST00000622454 GAGE5Q13069 117 aa9.95□□□□□ -0.82
EPB42-210ENST00000622454 GAGE13Q4V321 117 aa9.95□□□□□ -0.82
EPB42-210ENST00000622454 IGHV3-64A0A075B6Q5 118 aa9.94□□□□□ -0.82
EPB42-210ENST00000622454 TMEM238LA0A1B0GVL6 79 aa9.94□□□□□ -0.82
EPB42-210ENST00000622454 A6NJY4 79 aa9.94□□□□□ -0.82
EPB42-210ENST00000622454 FABP2P12104 132 aa9.94□□□□□ -0.82
EPB42-210ENST00000622454 SPATA3Q8NHX4 192 aa9.94□□□□□ -0.82
EPB42-210ENST00000622454 SPANXB1Q9NS25 103 aaPredicted RBP9.94□□□□□ -0.82
EPB42-210ENST00000622454 TRGV4A0A0C4DH28 118 aa9.94□□□□□ -0.82
EPB42-210ENST00000622454 A0A1B0GWB2 263 aa9.94□□□□□ -0.82
EPB42-210ENST00000622454 NTM-AS1Q6ZSK4 140 aa9.94□□□□□ -0.82
EPB42-210ENST00000622454 OR5A1Q8NGJ0 315 aa9.94□□□□□ -0.82
EPB42-210ENST00000622454 K7EP34 96 aa9.93□□□□□ -0.82
EPB42-210ENST00000622454 CSDC2Q9Y534 153 aaKnown RBP9.93□□□□□ -0.82
EPB42-210ENST00000622454 IGHV3-30-3P0DP02 117 aa9.92□□□□□ -0.82
EPB42-210ENST00000622454 GTSF1LQ9H1H1 148 aa9.92□□□□□ -0.82
EPB42-210ENST00000622454 CYSRT1A8MQ03 144 aa9.92□□□□□ -0.82
EPB42-210ENST00000622454 UBE2D1P51668 147 aa9.92□□□□□ -0.82
EPB42-210ENST00000622454 GEMIN7Q9H840 131 aaKnown RBP9.92□□□□□ -0.82
EPB42-210ENST00000622454 SPCS1Q9Y6A9 102 aa9.92□□□□□ -0.82
EPB42-210ENST00000622454 IGLL5B9A064 214 aa9.91□□□□□ -0.82
EPB42-210ENST00000622454 LINC00694P0DN24 101 aa9.91□□□□□ -0.82
EPB42-210ENST00000622454 SMAGPQ0VAQ4 97 aa9.91□□□□□ -0.82
EPB42-210ENST00000622454 IGHV1-58A0A0C4DH39 117 aa9.91□□□□□ -0.82
EPB42-210ENST00000622454 SMIM9A6NGZ8 99 aa9.91□□□□□ -0.82
EPB42-210ENST00000622454 FHL2Q14192 279 aa9.91□□□□□ -0.82
EPB42-210ENST00000622454 SBSPONQ8IVN8 264 aa9.91□□□□□ -0.82
EPB42-210ENST00000622454 KIR2DL5BQ8NHK3 375 aa9.91□□□□□ -0.82
EPB42-210ENST00000622454 TRAV8-3A0A0A6YYJ7 113 aa9.9□□□□□ -0.82
EPB42-210ENST00000622454 LOC100131303A0A0U1RQF7 123 aa9.9□□□□□ -0.83
EPB42-210ENST00000622454 IGHV3-30P01768 117 aa9.9□□□□□ -0.83
EPB42-210ENST00000622454 IGHV3-30-5P0DP03 117 aa9.9□□□□□ -0.83
EPB42-210ENST00000622454 TIRAPP58753 221 aa9.9□□□□□ -0.83
EPB42-210ENST00000622454 VSIG2Q96IQ7 327 aa9.89□□□□□ -0.83
EPB42-210ENST00000622454 TMEM243Q9BU79 118 aa9.89□□□□□ -0.83
EPB42-210ENST00000622454 X6R8D5 127 aa9.89□□□□□ -0.83
EPB42-210ENST00000622454 IGLV5-45A0A087WSX0 123 aa9.88□□□□□ -0.83
EPB42-210ENST00000622454 DEFB130BP0DP73 79 aa9.88□□□□□ -0.83
EPB42-210ENST00000622454 DEFB130AP0DP74 79 aa9.88□□□□□ -0.83
EPB42-210ENST00000622454 LINC00612Q8N6U2 182 aa9.88□□□□□ -0.83
EPB42-210ENST00000622454 UBE2L6O14933 153 aa9.88□□□□□ -0.83
EPB42-210ENST00000622454 C10orf126Q8N4M7 172 aa9.88□□□□□ -0.83
EPB42-210ENST00000622454 TRRAPQ9Y4A5 3859 aa9.87□□□□□ -0.83
EPB42-210ENST00000622454 SPINK8P0C7L1 97 aa9.87□□□□□ -0.83
EPB42-210ENST00000622454 HERVK_113P63121 156 aa9.87□□□□□ -0.83
EPB42-210ENST00000622454 CDKN2A-AS1Q9UH64 79 aa9.87□□□□□ -0.83
EPB42-210ENST00000622454 A0A0J9YXY3 114 aa9.87□□□□□ -0.83
EPB42-210ENST00000622454 TMEM238C9JI98 176 aa9.87□□□□□ -0.83
EPB42-210ENST00000622454 H7C423 109 aa9.87□□□□□ -0.83
EPB42-210ENST00000622454 KRTAP24-1Q3LI83 254 aa9.87□□□□□ -0.83
EPB42-210ENST00000622454 FAM19A3Q7Z5A8 133 aa9.87□□□□□ -0.83
EPB42-210ENST00000622454 CDC42SE2Q9NRR3 84 aa9.87□□□□□ -0.83
EPB42-210ENST00000622454 LINC00242Q5T6M2 205 aa9.86□□□□□ -0.83
EPB42-210ENST00000622454 TMEM101Q96IK0 257 aa9.86□□□□□ -0.83
EPB42-210ENST00000622454 NDUFA12Q9UI09 145 aa9.86□□□□□ -0.83
EPB42-210ENST00000622454 FBN1P35555 2871 aaKnown RBP9.86□□□□□ -0.83
EPB42-210ENST00000622454 APOC4P55056 127 aa9.86□□□□□ -0.83
EPB42-210ENST00000622454 WFDC9Q8NEX5 89 aa9.86□□□□□ -0.83
EPB42-210ENST00000622454 COX6A2Q02221 97 aa9.85□□□□□ -0.83
EPB42-210ENST00000622454 PGPEP1Q9NXJ5 209 aa9.85□□□□□ -0.83
EPB42-210ENST00000622454 NBEAL2Q6ZNJ1 2754 aa9.85□□□□□ -0.83
EPB42-210ENST00000622454 APOMO95445 188 aa9.84□□□□□ -0.83
EPB42-210ENST00000622454 ZFAND6Q6FIF0 208 aa9.84□□□□□ -0.83
EPB42-210ENST00000622454 TRBV6-8A0A0A6YYG3 113 aa9.84□□□□□ -0.83
EPB42-210ENST00000622454 TRAV13-1A0A0B4J241 112 aa9.84□□□□□ -0.83
EPB42-210ENST00000622454 RBX1P62877 108 aa9.84□□□□□ -0.83
EPB42-210ENST00000622454 DEFB135Q30KP9 77 aa9.84□□□□□ -0.83
EPB42-210ENST00000622454 A8MZ25 164 aa9.83□□□□□ -0.84
EPB42-210ENST00000622454 WIPF1O43516 503 aa9.83□□□□□ -0.84
EPB42-210ENST00000622454 CFC1BP0CG36 223 aa9.83□□□□□ -0.84
EPB42-210ENST00000622454 CFC1P0CG37 223 aa9.83□□□□□ -0.84
EPB42-210ENST00000622454 RPL24P83731 157 aaKnown RBP9.83□□□□□ -0.84
EPB42-210ENST00000622454 LYRM9A8MSI8 78 aa9.83□□□□□ -0.84
EPB42-210ENST00000622454 FAM222AQ5U5X8 452 aa9.82□□□□□ -0.84
EPB42-210ENST00000622454 LITAFQ99732 161 aa9.82□□□□□ -0.84
EPB42-210ENST00000622454 MUSTN1Q8IVN3 82 aa9.82□□□□□ -0.84
EPB42-210ENST00000622454 IGLV5-39A0A0G2JS06 123 aa9.81□□□□□ -0.84
EPB42-210ENST00000622454 A4D1N5 150 aa9.81□□□□□ -0.84
EPB42-210ENST00000622454 TSPAN13O95857 204 aa9.81□□□□□ -0.84
EPB42-210ENST00000622454 PRO0255Q9UI72 69 aa9.81□□□□□ -0.84
EPB42-210ENST00000622454 GYPEP15421 78 aa9.8□□□□□ -0.84
EPB42-210ENST00000622454 GAGE6Q13070 117 aa9.8□□□□□ -0.84
EPB42-210ENST00000622454 CHCHD5Q9BSY4 110 aa9.8□□□□□ -0.84
EPB42-210ENST00000622454 PRO1854Q9UHT4 67 aa9.8□□□□□ -0.84
EPB42-210ENST00000622454 NDUFA1O15239 70 aa9.8□□□□□ -0.84
EPB42-210ENST00000622454 OCIAD2Q56VL3 154 aa9.8□□□□□ -0.84
EPB42-210ENST00000622454 C3orf56Q8N813 242 aa9.8□□□□□ -0.84
EPB42-210ENST00000622454 ATP6V0E2Q8NHE4 81 aa9.8□□□□□ -0.84
EPB42-210ENST00000622454 SMIM1B2RUZ4 78 aa9.79□□□□□ -0.84
EPB42-210ENST00000622454 PRIMA1Q86XR5 153 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms