RNA–Protein interactions for RNA: ENST00000619890.1

SSX4B-202, Transcript of SSX family member 4B, humanhuman

TSL 5 BASIC

Gene SSX4B, Length 1,092 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4B-202ENST00000619890 TRAV8-3A0A0A6YYJ7 113 aa4.07□□□□□ -1.76
SSX4B-202ENST00000619890 USP17L23D6RBM5 183 aa4.07□□□□□ -1.76
SSX4B-202ENST00000619890 K7EN84 100 aa4.07□□□□□ -1.76
SSX4B-202ENST00000619890 PSCAO43653 123 aa4.07□□□□□ -1.76
SSX4B-202ENST00000619890 GZMBP10144 247 aa4.07□□□□□ -1.76
SSX4B-202ENST00000619890 LBHQ53QV2 105 aaPredicted RBP4.07□□□□□ -1.76
SSX4B-202ENST00000619890 SMIM15Q7Z3B0 74 aa4.07□□□□□ -1.76
SSX4B-202ENST00000619890 DAZ4Q86SG3 579 aaKnown RBP4.07□□□□□ -1.76
SSX4B-202ENST00000619890 NEXN-AS1Q8NBZ9 246 aa4.07□□□□□ -1.76
SSX4B-202ENST00000619890 BORCS7Q96B45 105 aa4.07□□□□□ -1.76
SSX4B-202ENST00000619890 RMI2Q96E14 147 aa4.07□□□□□ -1.76
SSX4B-202ENST00000619890 DNAJC30Q96LL9 226 aa4.07□□□□□ -1.76
SSX4B-202ENST00000619890 TM2D2Q9BX73 214 aa4.07□□□□□ -1.76
SSX4B-202ENST00000619890 GNB1LQ9BYB4 327 aa4.07□□□□□ -1.76
SSX4B-202ENST00000619890 PRO1933Q9H354 126 aa4.07□□□□□ -1.76
SSX4B-202ENST00000619890 DPH3P1Q9H4G8 78 aa4.07□□□□□ -1.76
SSX4B-202ENST00000619890 DAZ3Q9NR90 486 aaKnown RBP4.07□□□□□ -1.76
SSX4B-202ENST00000619890 COX11Q9Y6N1 276 aa4.07□□□□□ -1.76
SSX4B-202ENST00000619890 KIF25-AS1Q9Y6Z4 181 aa4.07□□□□□ -1.76
SSX4B-202ENST00000619890 A0A087WX48 190 aa4.06□□□□□ -1.76
SSX4B-202ENST00000619890 A0A0A0MQY5 61 aa4.06□□□□□ -1.76
SSX4B-202ENST00000619890 TRBV6-8A0A0A6YYG3 113 aa4.06□□□□□ -1.76
SSX4B-202ENST00000619890 FAM231BA6NCW3 169 aa4.06□□□□□ -1.76
SSX4B-202ENST00000619890 A8MWL6 223 aa4.06□□□□□ -1.76
SSX4B-202ENST00000619890 KRTAP29-1A8MX34 341 aaPredicted RBP4.06□□□□□ -1.76
SSX4B-202ENST00000619890 IGHV3-30P01768 117 aa4.06□□□□□ -1.76
SSX4B-202ENST00000619890 IGHV3-33P01772 117 aa4.06□□□□□ -1.76
SSX4B-202ENST00000619890 MGPP08493 103 aa4.06□□□□□ -1.76
SSX4B-202ENST00000619890 NPSP0C0P6 89 aa4.06□□□□□ -1.76
SSX4B-202ENST00000619890 IGHV3-30-3P0DP02 117 aa4.06□□□□□ -1.76
SSX4B-202ENST00000619890 IGHV3-30-5P0DP03 117 aa4.06□□□□□ -1.76
SSX4B-202ENST00000619890 XGP55808 180 aa4.06□□□□□ -1.76
SSX4B-202ENST00000619890 LYZL1Q6UWQ5 148 aa4.06□□□□□ -1.76
SSX4B-202ENST00000619890 SPATA12Q7Z6I5 190 aa4.06□□□□□ -1.76
SSX4B-202ENST00000619890 NIT1Q86X76 327 aa4.06□□□□□ -1.76
SSX4B-202ENST00000619890 BAGE3Q86Y29 109 aa4.06□□□□□ -1.76
SSX4B-202ENST00000619890 GFRA4Q9GZZ7 299 aa4.06□□□□□ -1.76
SSX4B-202ENST00000619890 RNASE7Q9H1E1 156 aaKnown RBP4.06□□□□□ -1.76
SSX4B-202ENST00000619890 TRBV25-1A0A075B6N4 114 aa4.05□□□□□ -1.76
SSX4B-202ENST00000619890 A0A087WTM6 91 aa4.05□□□□□ -1.76
SSX4B-202ENST00000619890 MUC21A0A0G2JKD1 596 aa4.05□□□□□ -1.76
SSX4B-202ENST00000619890 MUC21A0A140T8X8 626 aa4.05□□□□□ -1.76
SSX4B-202ENST00000619890 M0QY20 66 aa4.05□□□□□ -1.76
SSX4B-202ENST00000619890 HLA-DQA1P01909 254 aa4.05□□□□□ -1.76
SSX4B-202ENST00000619890 CRPP02741 224 aa4.05□□□□□ -1.76
SSX4B-202ENST00000619890 ESDP10768 282 aa4.05□□□□□ -1.76
SSX4B-202ENST00000619890 NTF3P20783 257 aa4.05□□□□□ -1.76
SSX4B-202ENST00000619890 Q0VG73 95 aa4.05□□□□□ -1.76
SSX4B-202ENST00000619890 TWIST1Q15672 202 aa4.05□□□□□ -1.76
SSX4B-202ENST00000619890 SUMO4Q6EEV6 95 aa4.05□□□□□ -1.76
SSX4B-202ENST00000619890 KRTAP5-3Q6L8H2 238 aa4.05□□□□□ -1.76
SSX4B-202ENST00000619890 RASL11AQ6T310 242 aa4.05□□□□□ -1.76
SSX4B-202ENST00000619890 NTN5Q8WTR8 489 aaPredicted RBP4.05□□□□□ -1.76
SSX4B-202ENST00000619890 PGLYRP4Q96LB8 373 aa4.05□□□□□ -1.76
SSX4B-202ENST00000619890 Q9HAA7 133 aa4.05□□□□□ -1.76
SSX4B-202ENST00000619890 Q9UF83 564 aa4.05□□□□□ -1.76
SSX4B-202ENST00000619890 NAT8BQ9UHF3 227 aa4.05□□□□□ -1.76
SSX4B-202ENST00000619890 TNFRSF18Q9Y5U5 241 aa4.05□□□□□ -1.76
SSX4B-202ENST00000619890 V9GYV3 84 aa4.05□□□□□ -1.76
SSX4B-202ENST00000619890 SMIM27A0A1W2PRY6 76 aa4.04□□□□□ -1.76
SSX4B-202ENST00000619890 A4D1N5 150 aa4.04□□□□□ -1.76
SSX4B-202ENST00000619890 FOXA3P55318 350 aaPredicted RBP4.04□□□□□ -1.76
SSX4B-202ENST00000619890 SSTP61278 116 aa4.04□□□□□ -1.76
SSX4B-202ENST00000619890 ZNF664Q8N3J9 261 aa4.04□□□□□ -1.76
SSX4B-202ENST00000619890 LINC00469Q8N7U9 141 aa4.04□□□□□ -1.76
SSX4B-202ENST00000619890 TSKUQ8WUA8 353 aa4.04□□□□□ -1.76
SSX4B-202ENST00000619890 GTSF1Q8WW33 167 aa4.04□□□□□ -1.76
SSX4B-202ENST00000619890 C14orf144Q96I85 54 aa4.04□□□□□ -1.76
SSX4B-202ENST00000619890 CHCHD5Q9BSY4 110 aa4.04□□□□□ -1.76
SSX4B-202ENST00000619890 IGHV1-24A0A0C4DH33 117 aa4.03□□□□□ -1.76
SSX4B-202ENST00000619890 A0A1B0GUT8 65 aa4.03□□□□□ -1.76
SSX4B-202ENST00000619890 GAGE12HA6NDE8 117 aa4.03□□□□□ -1.76
SSX4B-202ENST00000619890 HIGD1CA8MV81 97 aa4.03□□□□□ -1.76
SSX4B-202ENST00000619890 SERF1AO75920 110 aa4.03□□□□□ -1.76
SSX4B-202ENST00000619890 APCSP02743 223 aa4.03□□□□□ -1.76
SSX4B-202ENST00000619890 TMEM136Q6ZRR5 245 aa4.03□□□□□ -1.76
SSX4B-202ENST00000619890 MRPL52Q86TS9 123 aaKnown RBP4.03□□□□□ -1.76
SSX4B-202ENST00000619890 Q8N814 137 aa4.03□□□□□ -1.76
SSX4B-202ENST00000619890 C2orf88Q9BSF0 95 aa4.03□□□□□ -1.76
SSX4B-202ENST00000619890 LRCOL1A6NCL2 159 aa4.02□□□□□ -1.77
SSX4B-202ENST00000619890 TMEM262E9PQX1 116 aa4.02□□□□□ -1.77
SSX4B-202ENST00000619890 M0R143 59 aa4.02□□□□□ -1.77
SSX4B-202ENST00000619890 UBE2L6O14933 153 aa4.02□□□□□ -1.77
SSX4B-202ENST00000619890 NCR2O95944 276 aa4.02□□□□□ -1.77
SSX4B-202ENST00000619890 SMR3BP02814 79 aaPredicted RBP4.02□□□□□ -1.77
SSX4B-202ENST00000619890 ANGP03950 147 aaKnown RBP4.02□□□□□ -1.77
SSX4B-202ENST00000619890 COTL1Q14019 142 aa4.02□□□□□ -1.77
SSX4B-202ENST00000619890 MIAQ16674 131 aa4.02□□□□□ -1.77
SSX4B-202ENST00000619890 MPV17L2Q567V2 206 aa4.02□□□□□ -1.77
SSX4B-202ENST00000619890 ATP5L2Q7Z4Y8 100 aa4.02□□□□□ -1.77
SSX4B-202ENST00000619890 UBE2WQ96B02 151 aa4.02□□□□□ -1.77
SSX4B-202ENST00000619890 TMEM243Q9BU79 118 aa4.02□□□□□ -1.77
SSX4B-202ENST00000619890 VAMP8Q9BV40 100 aa4.02□□□□□ -1.77
SSX4B-202ENST00000619890 TMEM191AQ9H0A3 160 aa4.02□□□□□ -1.77
SSX4B-202ENST00000619890 KLK12Q9UKR0 248 aa4.02□□□□□ -1.77
SSX4B-202ENST00000619890 FAT3Q8TDW7 4589 aa4.01□□□□□ -1.77
SSX4B-202ENST00000619890 IGKV2D-24A0A075B6R9 120 aa4.01□□□□□ -1.77
SSX4B-202ENST00000619890 IGLV5-52A0A0A0MRZ9 124 aa4.01□□□□□ -1.77
SSX4B-202ENST00000619890 TRBV6-5A0A0K0K1A5 114 aa4.01□□□□□ -1.77
SSX4B-202ENST00000619890 A0A1B0GW15 77 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms