RNA–Protein interactions for RNA: ENST00000618939.4

CNOT3-210, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-210ENST00000618939 ZNF462Q96JM2 2506 aa10.21□□□□□ -0.77
CNOT3-210ENST00000618939 MTORP42345 2549 aa10.21□□□□□ -0.78
CNOT3-210ENST00000618939 A8MZ25 164 aa10.21□□□□□ -0.78
CNOT3-210ENST00000618939 TIRAPP58753 221 aa10.21□□□□□ -0.78
CNOT3-210ENST00000618939 MRPL23Q16540 153 aaKnown RBP10.21□□□□□ -0.78
CNOT3-210ENST00000618939 DEFB135Q30KP9 77 aa10.21□□□□□ -0.78
CNOT3-210ENST00000618939 C9orf153Q5TBE3 101 aa10.21□□□□□ -0.78
CNOT3-210ENST00000618939 ZNF843Q8N446 348 aa10.2□□□□□ -0.78
CNOT3-210ENST00000618939 ORMDL1Q9P0S3 153 aa10.2□□□□□ -0.78
CNOT3-210ENST00000618939 SPART-AS1P0CW21 52 aa10.2□□□□□ -0.78
CNOT3-210ENST00000618939 PRO0255Q9UI72 69 aa10.2□□□□□ -0.78
CNOT3-210ENST00000618939 PKD1L2Q7Z442 2459 aa10.2□□□□□ -0.78
CNOT3-210ENST00000618939 DOPEY1Q5JWR5 2465 aa10.2□□□□□ -0.78
CNOT3-210ENST00000618939 JMJD1CQ15652 2540 aa10.19□□□□□ -0.78
CNOT3-210ENST00000618939 DEFB4AO15263 64 aa10.19□□□□□ -0.78
CNOT3-210ENST00000618939 UBL5Q9BZL1 73 aa10.19□□□□□ -0.78
CNOT3-210ENST00000618939 ZNF580Q9UK33 172 aa10.19□□□□□ -0.78
CNOT3-210ENST00000618939 IGLV4-69A0A075B6H9 119 aa10.19□□□□□ -0.78
CNOT3-210ENST00000618939 TRIAP1O43715 76 aa10.19□□□□□ -0.78
CNOT3-210ENST00000618939 UBE2D4Q9Y2X8 147 aa10.19□□□□□ -0.78
CNOT3-210ENST00000618939 SPANXDQ9BXN6 97 aa10.18□□□□□ -0.78
CNOT3-210ENST00000618939 NDUFA1O15239 70 aa10.18□□□□□ -0.78
CNOT3-210ENST00000618939 DEFB121Q5J5C9 76 aa10.18□□□□□ -0.78
CNOT3-210ENST00000618939 LINC00308Q8TCZ7 52 aa10.18□□□□□ -0.78
CNOT3-210ENST00000618939 TRBV30A0A0K0K1B3 111 aa10.17□□□□□ -0.78
CNOT3-210ENST00000618939 PIK3CD-AS1Q5SR53 167 aa10.17□□□□□ -0.78
CNOT3-210ENST00000618939 AGRNO00468 2067 aa10.17□□□□□ -0.78
CNOT3-210ENST00000618939 MRPS36P82909 103 aaKnown RBP10.16□□□□□ -0.78
CNOT3-210ENST00000618939 CFAP54Q96N23 3096 aa10.16□□□□□ -0.78
CNOT3-210ENST00000618939 TEX49A0A1B0GTD5 131 aa10.16□□□□□ -0.78
CNOT3-210ENST00000618939 LECT2O14960 151 aa10.16□□□□□ -0.78
CNOT3-210ENST00000618939 B5MCH6 92 aa10.15□□□□□ -0.78
CNOT3-210ENST00000618939 MT-ATP8P03928 68 aa10.15□□□□□ -0.78
CNOT3-210ENST00000618939 UBE2D1P51668 147 aa10.15□□□□□ -0.78
CNOT3-210ENST00000618939 KRTAP10-9P60411 292 aa10.15□□□□□ -0.78
CNOT3-210ENST00000618939 SPANXCQ9NY87 97 aa10.15□□□□□ -0.78
CNOT3-210ENST00000618939 TRBV6-4A0A1B0GX49 114 aa10.15□□□□□ -0.78
CNOT3-210ENST00000618939 INSL3P51460 131 aa10.15□□□□□ -0.78
CNOT3-210ENST00000618939 TSPEAR-AS2P59090 65 aa10.15□□□□□ -0.79
CNOT3-210ENST00000618939 LINC01546A6NGU7 62 aa10.14□□□□□ -0.79
CNOT3-210ENST00000618939 LINC01006Q8NI28 216 aa10.14□□□□□ -0.79
CNOT3-210ENST00000618939 ODF3L2Q3SX64 289 aa10.14□□□□□ -0.79
CNOT3-210ENST00000618939 HAMPP81172 84 aa10.14□□□□□ -0.79
CNOT3-210ENST00000618939 COL27A1Q8IZC6 1860 aaPredicted RBP10.14□□□□□ -0.79
CNOT3-210ENST00000618939 H7C423 109 aa10.14□□□□□ -0.79
CNOT3-210ENST00000618939 TIMM17BO60830 172 aa10.14□□□□□ -0.79
CNOT3-210ENST00000618939 NKAPP1Q8N9T2 125 aa10.14□□□□□ -0.79
CNOT3-210ENST00000618939 WFDC10AQ9H1F0 79 aa10.14□□□□□ -0.79
CNOT3-210ENST00000618939 Q9HAA7 133 aa10.14□□□□□ -0.79
CNOT3-210ENST00000618939 KIF25-AS1Q9Y6Z4 181 aa10.14□□□□□ -0.79
CNOT3-210ENST00000618939 CXCL5P42830 114 aa10.13□□□□□ -0.79
CNOT3-210ENST00000618939 DSCR8Q96T75 97 aa10.13□□□□□ -0.79
CNOT3-210ENST00000618939 TRBV6-8A0A0A6YYG3 113 aa10.13□□□□□ -0.79
CNOT3-210ENST00000618939 FAM222AQ5U5X8 452 aa10.12□□□□□ -0.79
CNOT3-210ENST00000618939 SPAG11BQ08648 103 aa10.12□□□□□ -0.79
CNOT3-210ENST00000618939 ANKRD17O75179 2603 aaKnown RBP10.12□□□□□ -0.79
CNOT3-210ENST00000618939 UBE2DNLQ8IWF7 75 aa10.11□□□□□ -0.79
CNOT3-210ENST00000618939 XIRP2A4UGR9 3374 aa10.11□□□□□ -0.79
CNOT3-210ENST00000618939 KLK12Q9UKR0 248 aa10.11□□□□□ -0.79
CNOT3-210ENST00000618939 IGKV2D-24A0A075B6R9 120 aa10.11□□□□□ -0.79
CNOT3-210ENST00000618939 CAMK2N2Q96S95 79 aa10.1□□□□□ -0.79
CNOT3-210ENST00000618939 C1orf43Q9BWL3 253 aa10.1□□□□□ -0.79
CNOT3-210ENST00000618939 FAM236AA0A1B0GUQ0 79 aa10.1□□□□□ -0.79
CNOT3-210ENST00000618939 FAM236BA0A1B0GV22 79 aa10.1□□□□□ -0.79
CNOT3-210ENST00000618939 POM121L12Q8N7R1 296 aa10.1□□□□□ -0.79
CNOT3-210ENST00000618939 TMEM126AQ9H061 195 aa10.1□□□□□ -0.79
CNOT3-210ENST00000618939 SMIM9A6NGZ8 99 aa10.09□□□□□ -0.79
CNOT3-210ENST00000618939 LOC100131303A0A0U1RQF7 123 aa10.09□□□□□ -0.79
CNOT3-210ENST00000618939 PSCAO43653 123 aa10.09□□□□□ -0.79
CNOT3-210ENST00000618939 LINC00269Q8N2A0 174 aa10.09□□□□□ -0.79
CNOT3-210ENST00000618939 IBA57-AS1B1ANH7 110 aa10.08□□□□□ -0.8
CNOT3-210ENST00000618939 SPATA25Q9BR10 227 aa10.08□□□□□ -0.8
CNOT3-210ENST00000618939 NCR3O14931 201 aa10.08□□□□□ -0.8
CNOT3-210ENST00000618939 LINC00315P59091 139 aa10.08□□□□□ -0.8
CNOT3-210ENST00000618939 UBE2D3P61077 147 aa10.08□□□□□ -0.8
CNOT3-210ENST00000618939 UBE2D2P62837 147 aa10.08□□□□□ -0.8
CNOT3-210ENST00000618939 FAM19A4Q96LR4 140 aa10.08□□□□□ -0.8
CNOT3-210ENST00000618939 CHCHD7Q9BUK0 85 aa10.08□□□□□ -0.8
CNOT3-210ENST00000618939 TRAV26-1A0A087WT03 109 aa10.08□□□□□ -0.8
CNOT3-210ENST00000618939 IGKV3D-7A0A0C4DH55 119 aa10.08□□□□□ -0.8
CNOT3-210ENST00000618939 LINC00242Q5T6M2 205 aa10.07□□□□□ -0.8
CNOT3-210ENST00000618939 AMELXQ99217 191 aa10.07□□□□□ -0.8
CNOT3-210ENST00000618939 LYRM9A8MSI8 78 aa10.07□□□□□ -0.8
CNOT3-210ENST00000618939 SS18L2Q9UHA2 77 aa10.07□□□□□ -0.8
CNOT3-210ENST00000618939 F8WEM9 126 aa10.06□□□□□ -0.8
CNOT3-210ENST00000618939 LST1O00453 97 aa10.06□□□□□ -0.8
CNOT3-210ENST00000618939 TRACP01848 142 aa10.06□□□□□ -0.8
CNOT3-210ENST00000618939 KLK9Q2XQG4 91 aa10.06□□□□□ -0.8
CNOT3-210ENST00000618939 ACANP16112 2415 aa10.06□□□□□ -0.8
CNOT3-210ENST00000618939 REG3AQ06141 175 aa10.06□□□□□ -0.8
CNOT3-210ENST00000618939 LINC00482Q8N8I6 264 aa10.06□□□□□ -0.8
CNOT3-210ENST00000618939 CDC42SE2Q9NRR3 84 aa10.06□□□□□ -0.8
CNOT3-210ENST00000618939 C1orf158Q8N1D5 194 aa10.06□□□□□ -0.8
CNOT3-210ENST00000618939 JMJD7-PLA2G4BH0Y9G9 81 aa10.06□□□□□ -0.8
CNOT3-210ENST00000618939 LINC00643Q86TS7 51 aa10.06□□□□□ -0.8
CNOT3-210ENST00000618939 EPG5Q9HCE0 2579 aa10.05□□□□□ -0.8
CNOT3-210ENST00000618939 NDUFA7O95182 113 aa10.05□□□□□ -0.8
CNOT3-210ENST00000618939 CHCHD10Q8WYQ3 142 aaPredicted RBP10.05□□□□□ -0.8
CNOT3-210ENST00000618939 C14orf132Q9NPU4 83 aa10.05□□□□□ -0.8
CNOT3-210ENST00000618939 Q6ZSN1 163 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms