RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 GAGE12HA6NDE8 117 aa9.65□□□□□ -0.86
TCF3-220ENST00000611869 LY6G6DO95868 133 aa9.65□□□□□ -0.86
TCF3-220ENST00000611869 NDUFA11Q86Y39 141 aa9.65□□□□□ -0.86
TCF3-220ENST00000611869 HERV-K104P63124 156 aa9.65□□□□□ -0.86
TCF3-220ENST00000611869 ANAPC13Q9BS18 74 aa9.65□□□□□ -0.86
TCF3-220ENST00000611869 GAGE2AQ6NT46 116 aa9.65□□□□□ -0.87
TCF3-220ENST00000611869 LAMTOR3Q9UHA4 124 aa9.65□□□□□ -0.87
TCF3-220ENST00000611869 TRAV13-2A0A0B4J235 113 aa9.64□□□□□ -0.87
TCF3-220ENST00000611869 A0A0J9YXY3 114 aa9.64□□□□□ -0.87
TCF3-220ENST00000611869 PLA2G2AP14555 144 aa9.64□□□□□ -0.87
TCF3-220ENST00000611869 MRPL23Q16540 153 aaKnown RBP9.64□□□□□ -0.87
TCF3-220ENST00000611869 ZFAND6Q6FIF0 208 aa9.64□□□□□ -0.87
TCF3-220ENST00000611869 COX7B2Q8TF08 81 aa9.64□□□□□ -0.87
TCF3-220ENST00000611869 PRO0255Q9UI72 69 aa9.64□□□□□ -0.87
TCF3-220ENST00000611869 INSL3P51460 131 aa9.64□□□□□ -0.87
TCF3-220ENST00000611869 NFE4Q86UQ8 179 aa9.64□□□□□ -0.87
TCF3-220ENST00000611869 UBE2DNLQ8IWF7 75 aa9.64□□□□□ -0.87
TCF3-220ENST00000611869 SND1-IT1Q9HBX3 110 aa9.64□□□□□ -0.87
TCF3-220ENST00000611869 A8MZ25 164 aa9.63□□□□□ -0.87
TCF3-220ENST00000611869 FAM222AQ5U5X8 452 aa9.63□□□□□ -0.87
TCF3-220ENST00000611869 HILS1P60008 231 aa9.63□□□□□ -0.87
TCF3-220ENST00000611869 RPL32P62910 135 aaKnown RBP9.63□□□□□ -0.87
TCF3-220ENST00000611869 ZMAT4Q9H898 229 aa9.63□□□□□ -0.87
TCF3-220ENST00000611869 OVOL2Q9BRP0 275 aa9.63□□□□□ -0.87
TCF3-220ENST00000611869 TINCRA0A1B0GVN0 87 aa9.62□□□□□ -0.87
TCF3-220ENST00000611869 TMEM223A0PJW6 202 aa9.62□□□□□ -0.87
TCF3-220ENST00000611869 IGHV3-30P01768 117 aa9.62□□□□□ -0.87
TCF3-220ENST00000611869 IGHV3-33P01772 117 aa9.62□□□□□ -0.87
TCF3-220ENST00000611869 IGHV3-30-5P0DP03 117 aa9.62□□□□□ -0.87
TCF3-220ENST00000611869 PTH2Q96A98 100 aa9.62□□□□□ -0.87
TCF3-220ENST00000611869 ICOSQ9Y6W8 199 aa9.62□□□□□ -0.87
TCF3-220ENST00000611869 RS1O15537 224 aa9.62□□□□□ -0.87
TCF3-220ENST00000611869 ZNF580Q9UK33 172 aa9.61□□□□□ -0.87
TCF3-220ENST00000611869 COX7A2LO14548 114 aa9.61□□□□□ -0.87
TCF3-220ENST00000611869 IGLV2-18A0A075B6J9 118 aa9.6□□□□□ -0.87
TCF3-220ENST00000611869 IGIPA6NJ69 53 aa9.6□□□□□ -0.87
TCF3-220ENST00000611869 MIR7-3HGQ8N6C7 128 aa9.6□□□□□ -0.87
TCF3-220ENST00000611869 Q9HAA7 133 aa9.6□□□□□ -0.87
TCF3-220ENST00000611869 LINC01620Q4KN68 170 aa9.6□□□□□ -0.87
TCF3-220ENST00000611869 ANKRD29Q8N6D5 301 aa9.6□□□□□ -0.87
TCF3-220ENST00000611869 LOC100131303A0A0U1RQF7 123 aa9.6□□□□□ -0.87
TCF3-220ENST00000611869 EDA2RQ9HAV5 297 aa9.59□□□□□ -0.87
TCF3-220ENST00000611869 MYO15AQ9UKN7 3530 aa9.59□□□□□ -0.87
TCF3-220ENST00000611869 GHRHP01286 108 aa9.59□□□□□ -0.87
TCF3-220ENST00000611869 KLK12Q9UKR0 248 aa9.59□□□□□ -0.87
TCF3-220ENST00000611869 IGKV2D-24A0A075B6R9 120 aa9.59□□□□□ -0.87
TCF3-220ENST00000611869 CLEC2BQ92478 149 aa9.59□□□□□ -0.87
TCF3-220ENST00000611869 TRAV26-1A0A087WT03 109 aa9.59□□□□□ -0.87
TCF3-220ENST00000611869 PSCAO43653 123 aa9.59□□□□□ -0.87
TCF3-220ENST00000611869 TEN1Q86WV5 123 aa9.58□□□□□ -0.88
TCF3-220ENST00000611869 PYGO1Q9Y3Y4 419 aa9.58□□□□□ -0.88
TCF3-220ENST00000611869 MIAQ16674 131 aa9.58□□□□□ -0.88
TCF3-220ENST00000611869 TCL1BO95988 128 aa9.57□□□□□ -0.88
TCF3-220ENST00000611869 TNRC18O15417 2968 aaPredicted RBP9.57□□□□□ -0.88
TCF3-220ENST00000611869 INAFM2P0DMQ5 153 aa9.57□□□□□ -0.88
TCF3-220ENST00000611869 BAALC-AS2P0C853 105 aa9.57□□□□□ -0.88
TCF3-220ENST00000611869 CRYBA4P53673 196 aa9.56□□□□□ -0.88
TCF3-220ENST00000611869 CFAP46Q8IYW2 2715 aa9.56□□□□□ -0.88
TCF3-220ENST00000611869 FLNAP21333 2647 aaKnown RBP9.56□□□□□ -0.88
TCF3-220ENST00000611869 HIST1H4AP62805 103 aaKnown RBP9.56□□□□□ -0.88
TCF3-220ENST00000611869 UBE2D4Q9Y2X8 147 aa9.56□□□□□ -0.88
TCF3-220ENST00000611869 TRBV6-4A0A1B0GX49 114 aa9.56□□□□□ -0.88
TCF3-220ENST00000611869 LINC00269Q8N2A0 174 aa9.55□□□□□ -0.88
TCF3-220ENST00000611869 TRBV6-8A0A0A6YYG3 113 aa9.55□□□□□ -0.88
TCF3-220ENST00000611869 C1orf158Q8N1D5 194 aa9.55□□□□□ -0.88
TCF3-220ENST00000611869 C1orf43Q9BWL3 253 aa9.55□□□□□ -0.88
TCF3-220ENST00000611869 F8P00451 2351 aa9.54□□□□□ -0.88
TCF3-220ENST00000611869 FOXI1Q12951 378 aa9.54□□□□□ -0.88
TCF3-220ENST00000611869 SPANXB1Q9NS25 103 aaPredicted RBP9.54□□□□□ -0.88
TCF3-220ENST00000611869 NDUFA7O95182 113 aa9.53□□□□□ -0.88
TCF3-220ENST00000611869 CAMK2N2Q96S95 79 aa9.53□□□□□ -0.88
TCF3-220ENST00000611869 KIF25-AS1Q9Y6Z4 181 aa9.53□□□□□ -0.88
TCF3-220ENST00000611869 ADGRG4Q8IZF6 3080 aa9.53□□□□□ -0.88
TCF3-220ENST00000611869 IGLV4-69A0A075B6H9 119 aa9.53□□□□□ -0.88
TCF3-220ENST00000611869 SMIM9A6NGZ8 99 aa9.53□□□□□ -0.88
TCF3-220ENST00000611869 TIRAPP58753 221 aa9.53□□□□□ -0.88
TCF3-220ENST00000611869 SPAG11BQ08648 103 aa9.53□□□□□ -0.88
TCF3-220ENST00000611869 A0A0B4J2C4 111 aa9.52□□□□□ -0.88
TCF3-220ENST00000611869 G3V4G9 280 aa9.52□□□□□ -0.88
TCF3-220ENST00000611869 IGLV1-51P01701 117 aa9.52□□□□□ -0.88
TCF3-220ENST00000611869 PIK3CD-AS1Q5SR53 167 aa9.52□□□□□ -0.89
TCF3-220ENST00000611869 Q6ZSN1 163 aa9.52□□□□□ -0.89
TCF3-220ENST00000611869 NKAPP1Q8N9T2 125 aa9.52□□□□□ -0.89
TCF3-220ENST00000611869 C15orf53Q8NAA6 179 aa9.52□□□□□ -0.89
TCF3-220ENST00000611869 FAM110AQ9BQ89 295 aa9.52□□□□□ -0.89
TCF3-220ENST00000611869 ITPR3Q14573 2671 aa9.52□□□□□ -0.89
TCF3-220ENST00000611869 LYRM9A8MSI8 78 aa9.51□□□□□ -0.89
TCF3-220ENST00000611869 RBMY1FQ15415 496 aaKnown RBP9.51□□□□□ -0.89
TCF3-220ENST00000611869 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.51□□□□□ -0.89
TCF3-220ENST00000611869 DMXL2Q8TDJ6 3036 aa9.5□□□□□ -0.89
TCF3-220ENST00000611869 TSPEAR-AS2P59090 65 aa9.5□□□□□ -0.89
TCF3-220ENST00000611869 TRBV10-2A0A0K0K1G8 114 aa9.5□□□□□ -0.89
TCF3-220ENST00000611869 MRPS36P82909 103 aaKnown RBP9.5□□□□□ -0.89
TCF3-220ENST00000611869 REG3AQ06141 175 aa9.5□□□□□ -0.89
TCF3-220ENST00000611869 LINC00308Q8TCZ7 52 aa9.5□□□□□ -0.89
TCF3-220ENST00000611869 MUC4Q99102 2169 aa9.49□□□□□ -0.89
TCF3-220ENST00000611869 UBE2D3P61077 147 aa9.49□□□□□ -0.89
TCF3-220ENST00000611869 UBE2D2P62837 147 aa9.49□□□□□ -0.89
TCF3-220ENST00000611869 RBX1P62877 108 aa9.49□□□□□ -0.89
TCF3-220ENST00000611869 IGHV4-28A0A0C4DH34 117 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms