RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 CDKN2A-AS1Q9UH64 79 aa5.34□□□□□ -1.55
CSDE1-218ENST00000610726 U3KQK5 164 aa5.34□□□□□ -1.55
CSDE1-218ENST00000610726 K7EP34 96 aa5.34□□□□□ -1.55
CSDE1-218ENST00000610726 GAGE2EQ4V326 116 aa5.34□□□□□ -1.55
CSDE1-218ENST00000610726 GAGE2DQ9UEU5 116 aa5.34□□□□□ -1.55
CSDE1-218ENST00000610726 MUC4Q99102 2169 aa5.34□□□□□ -1.55
CSDE1-218ENST00000610726 FRYQ5TBA9 3013 aa5.34□□□□□ -1.56
CSDE1-218ENST00000610726 TRAV13-2A0A0B4J235 113 aa5.34□□□□□ -1.56
CSDE1-218ENST00000610726 NDUFA7O95182 113 aa5.34□□□□□ -1.56
CSDE1-218ENST00000610726 HERV-K104P63124 156 aa5.34□□□□□ -1.56
CSDE1-218ENST00000610726 BOD1L1Q8NFC6 3051 aa5.34□□□□□ -1.56
CSDE1-218ENST00000610726 IGLV4-3A0A075B6K6 122 aa5.33□□□□□ -1.56
CSDE1-218ENST00000610726 IGHV1-58A0A0C4DH39 117 aa5.33□□□□□ -1.56
CSDE1-218ENST00000610726 TRBV27A0A0K0K1C4 114 aa5.33□□□□□ -1.56
CSDE1-218ENST00000610726 LOC100131303A0A0U1RQF7 123 aa5.33□□□□□ -1.56
CSDE1-218ENST00000610726 LYRM9A8MSI8 78 aa5.33□□□□□ -1.56
CSDE1-218ENST00000610726 PRSS47A8MTI9 375 aa5.33□□□□□ -1.56
CSDE1-218ENST00000610726 LINC00269Q8N2A0 174 aa5.33□□□□□ -1.56
CSDE1-218ENST00000610726 C9orf85Q96MD7 179 aa5.33□□□□□ -1.56
CSDE1-218ENST00000610726 SND1-IT1Q9HBX3 110 aa5.33□□□□□ -1.56
CSDE1-218ENST00000610726 K7EP13 123 aa5.33□□□□□ -1.56
CSDE1-218ENST00000610726 BRI3O95415 125 aa5.33□□□□□ -1.56
CSDE1-218ENST00000610726 LINC00310P59036 64 aa5.33□□□□□ -1.56
CSDE1-218ENST00000610726 IGKV2D-26A0A0A0MRZ7 120 aa5.33□□□□□ -1.56
CSDE1-218ENST00000610726 IGHV4-28A0A0C4DH34 117 aa5.33□□□□□ -1.56
CSDE1-218ENST00000610726 IGLV1-51P01701 117 aa5.33□□□□□ -1.56
CSDE1-218ENST00000610726 OCIAD2Q56VL3 154 aa5.33□□□□□ -1.56
CSDE1-218ENST00000610726 CNFNQ9BYD5 112 aa5.33□□□□□ -1.56
CSDE1-218ENST00000610726 SOCS3O14543 225 aa5.32□□□□□ -1.56
CSDE1-218ENST00000610726 RS1O15537 224 aa5.32□□□□□ -1.56
CSDE1-218ENST00000610726 SIGMAR1Q99720 223 aa5.32□□□□□ -1.56
CSDE1-218ENST00000610726 DEFB131BA0A096LNP1 70 aa5.32□□□□□ -1.56
CSDE1-218ENST00000610726 MIFP14174 115 aa5.32□□□□□ -1.56
CSDE1-218ENST00000610726 POLR2KP53803 58 aaKnown RBP5.32□□□□□ -1.56
CSDE1-218ENST00000610726 SPAG11BQ08648 103 aa5.32□□□□□ -1.56
CSDE1-218ENST00000610726 GAGE2AQ6NT46 116 aa5.32□□□□□ -1.56
CSDE1-218ENST00000610726 GTSF1LQ9H1H1 148 aa5.32□□□□□ -1.56
CSDE1-218ENST00000610726 IGHV4-4A0A075B6R2 117 aa5.32□□□□□ -1.56
CSDE1-218ENST00000610726 OVOL2Q9BRP0 275 aa5.32□□□□□ -1.56
CSDE1-218ENST00000610726 ZNF580Q9UK33 172 aa5.32□□□□□ -1.56
CSDE1-218ENST00000610726 HIGD1BQ9P298 99 aa5.32□□□□□ -1.56
CSDE1-218ENST00000610726 TRBV6-4A0A1B0GX49 114 aa5.31□□□□□ -1.56
CSDE1-218ENST00000610726 IGHV4-30-4P0DP06 118 aa5.31□□□□□ -1.56
CSDE1-218ENST00000610726 IFITM1P13164 125 aa5.31□□□□□ -1.56
CSDE1-218ENST00000610726 RPL18AQ02543 176 aaKnown RBP5.31□□□□□ -1.56
CSDE1-218ENST00000610726 MIR7-3HGQ8N6C7 128 aa5.31□□□□□ -1.56
CSDE1-218ENST00000610726 CARD19Q96LW7 228 aa5.31□□□□□ -1.56
CSDE1-218ENST00000610726 TRBV6-8A0A0A6YYG3 113 aa5.31□□□□□ -1.56
CSDE1-218ENST00000610726 TRBV6-5A0A0K0K1A5 114 aa5.31□□□□□ -1.56
CSDE1-218ENST00000610726 ZNF22P17026 224 aaPredicted RBP5.31□□□□□ -1.56
CSDE1-218ENST00000610726 TSHBP01222 138 aa5.31□□□□□ -1.56
CSDE1-218ENST00000610726 URB1-AS1Q96HZ7 61 aa5.31□□□□□ -1.56
CSDE1-218ENST00000610726 REG3AQ06141 175 aa5.3□□□□□ -1.56
CSDE1-218ENST00000610726 GAGE12HA6NDE8 117 aa5.3□□□□□ -1.56
CSDE1-218ENST00000610726 A8MZ25 164 aa5.3□□□□□ -1.56
CSDE1-218ENST00000610726 F8W1H4 67 aa5.3□□□□□ -1.56
CSDE1-218ENST00000610726 TAX1BP3O14907 124 aa5.3□□□□□ -1.56
CSDE1-218ENST00000610726 C1orf158Q8N1D5 194 aa5.3□□□□□ -1.56
CSDE1-218ENST00000610726 MAPKAPK5-AS1Q8N8E1 139 aa5.3□□□□□ -1.56
CSDE1-218ENST00000610726 COL27A1Q8IZC6 1860 aaPredicted RBP5.3□□□□□ -1.56
CSDE1-218ENST00000610726 HIGD2BQ4VC39 106 aa5.3□□□□□ -1.56
CSDE1-218ENST00000610726 IGSF10Q6WRI0 2623 aa5.3□□□□□ -1.56
CSDE1-218ENST00000610726 TINCRA0A1B0GVN0 87 aa5.29□□□□□ -1.56
CSDE1-218ENST00000610726 NDUFA1O15239 70 aa5.29□□□□□ -1.56
CSDE1-218ENST00000610726 NTN5Q8WTR8 489 aaPredicted RBP5.29□□□□□ -1.56
CSDE1-218ENST00000610726 C16orf95Q9H693 158 aa5.29□□□□□ -1.56
CSDE1-218ENST00000610726 DMXL2Q8TDJ6 3036 aa5.29□□□□□ -1.56
CSDE1-218ENST00000610726 F8WEM9 126 aa5.29□□□□□ -1.56
CSDE1-218ENST00000610726 HIST1H4AP62805 103 aaKnown RBP5.29□□□□□ -1.56
CSDE1-218ENST00000610726 GAGE2BQ13066 116 aa5.29□□□□□ -1.56
CSDE1-218ENST00000610726 NFE4Q86UQ8 179 aa5.29□□□□□ -1.56
CSDE1-218ENST00000610726 A0A0J9YXY3 114 aa5.29□□□□□ -1.56
CSDE1-218ENST00000610726 RBX1P62877 108 aa5.29□□□□□ -1.56
CSDE1-218ENST00000610726 UBE2BP63146 152 aa5.29□□□□□ -1.56
CSDE1-218ENST00000610726 COX8CQ7Z4L0 72 aa5.29□□□□□ -1.56
CSDE1-218ENST00000610726 CHCHD10Q8WYQ3 142 aaPredicted RBP5.29□□□□□ -1.56
CSDE1-218ENST00000610726 SPATA25Q9BR10 227 aa5.29□□□□□ -1.56
CSDE1-218ENST00000610726 SPTBN5Q9NRC6 3674 aaKnown RBP5.29□□□□□ -1.56
CSDE1-218ENST00000610726 REV3LO60673 3130 aa5.28□□□□□ -1.56
CSDE1-218ENST00000610726 KIR2DL5BQ8NHK3 375 aa5.28□□□□□ -1.56
CSDE1-218ENST00000610726 PPDPFLQ8WWR9 84 aa5.28□□□□□ -1.56
CSDE1-218ENST00000610726 ATMQ13315 3056 aa5.28□□□□□ -1.56
CSDE1-218ENST00000610726 CHD6Q8TD26 2715 aa5.28□□□□□ -1.56
CSDE1-218ENST00000610726 TNRC18O15417 2968 aaPredicted RBP5.27□□□□□ -1.57
CSDE1-218ENST00000610726 RETNQ9HD89 108 aa5.27□□□□□ -1.57
CSDE1-218ENST00000610726 NBEAQ8NFP9 2946 aa5.27□□□□□ -1.57
CSDE1-218ENST00000610726 INAFM2P0DMQ5 153 aa5.27□□□□□ -1.57
CSDE1-218ENST00000610726 TMEM126AQ9H061 195 aa5.27□□□□□ -1.57
CSDE1-218ENST00000610726 TMEM223A0PJW6 202 aa5.27□□□□□ -1.57
CSDE1-218ENST00000610726 NCR3O14931 201 aa5.27□□□□□ -1.57
CSDE1-218ENST00000610726 KPRPQ5T749 579 aaPredicted RBP5.27□□□□□ -1.57
CSDE1-218ENST00000610726 FLNCQ14315 2725 aa5.27□□□□□ -1.57
CSDE1-218ENST00000610726 BAALC-AS2P0C853 105 aa5.27□□□□□ -1.57
CSDE1-218ENST00000610726 RPL32P62910 135 aaKnown RBP5.27□□□□□ -1.57
CSDE1-218ENST00000610726 Q8N2B8 174 aa5.27□□□□□ -1.57
CSDE1-218ENST00000610726 DEFB105AQ8NG35 78 aa5.27□□□□□ -1.57
CSDE1-218ENST00000610726 LINC00526Q96FQ7 95 aa5.27□□□□□ -1.57
CSDE1-218ENST00000610726 PYGO1Q9Y3Y4 419 aa5.27□□□□□ -1.57
CSDE1-218ENST00000610726 WFDC2Q14508 124 aa5.26□□□□□ -1.57
CSDE1-218ENST00000610726 SETXQ7Z333 2677 aaKnown RBP5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms