RNA–Protein interactions for RNA: ENST00000609041.1

TAF4-208, Transcript of TATA-box binding protein associated factor 4, human

Gene TAF4, Length 2,487 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TAF4-208	ENST00000609041	CDKN2A-AS1	Q9UH64	79 aa		13.94	□□□□□ -0.18
TAF4-208	ENST00000609041	PRSS2	P07478	247 aa		13.93	□□□□□ -0.18
TAF4-208	ENST00000609041	SPATA25	Q9BR10	227 aa		13.93	□□□□□ -0.18
TAF4-208	ENST00000609041	DGAT2L7P	Q6IED9	249 aa		13.93	□□□□□ -0.18
TAF4-208	ENST00000609041	SIGMAR1	Q99720	223 aa		13.93	□□□□□ -0.18
TAF4-208	ENST00000609041	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	13.92	□□□□□ -0.18
TAF4-208	ENST00000609041	LINC01006	Q8NI28	216 aa		13.92	□□□□□ -0.18
TAF4-208	ENST00000609041	LINC00694	P0DN24	101 aa		13.91	□□□□□ -0.18
TAF4-208	ENST00000609041		Q1RN00	199 aa		13.91	□□□□□ -0.18
TAF4-208	ENST00000609041	ZFAND6	Q6FIF0	208 aa		13.91	□□□□□ -0.18
TAF4-208	ENST00000609041		K7EQD1	137 aa		13.9	□□□□□ -0.18
TAF4-208	ENST00000609041	SBSPON	Q8IVN8	264 aa		13.9	□□□□□ -0.18
TAF4-208	ENST00000609041	SPANXD	Q9BXN6	97 aa		13.9	□□□□□ -0.18
TAF4-208	ENST00000609041	SPANXC	Q9NY87	97 aa		13.9	□□□□□ -0.18
TAF4-208	ENST00000609041	TIRAP	P58753	221 aa		13.9	□□□□□ -0.18
TAF4-208	ENST00000609041	NPC2	P61916	151 aa		13.9	□□□□□ -0.18
TAF4-208	ENST00000609041	COX6A2	Q02221	97 aa		13.9	□□□□□ -0.18
TAF4-208	ENST00000609041	KRTAP1-1	Q07627	177 aa		13.9	□□□□□ -0.18
TAF4-208	ENST00000609041	WFDC10A	Q9H1F0	79 aa		13.9	□□□□□ -0.18
TAF4-208	ENST00000609041	IGLV5-45	A0A087WSX0	123 aa		13.89	□□□□□ -0.19
TAF4-208	ENST00000609041	GIG44	P09565	113 aa	Predicted RBP	13.89	□□□□□ -0.19
TAF4-208	ENST00000609041	RPL36A	P83881	106 aa	Known RBP	13.89	□□□□□ -0.19
TAF4-208	ENST00000609041	TEN1	Q86WV5	123 aa		13.89	□□□□□ -0.19
TAF4-208	ENST00000609041	RPL36AL	Q969Q0	106 aa	Known RBP	13.89	□□□□□ -0.19
TAF4-208	ENST00000609041	SETD2	Q9BYW2	2564 aa	Predicted RBP	13.89	□□□□□ -0.19
TAF4-208	ENST00000609041	SMAGP	Q0VAQ4	97 aa		13.89	□□□□□ -0.19
TAF4-208	ENST00000609041	MIA	Q16674	131 aa		13.89	□□□□□ -0.19
TAF4-208	ENST00000609041	NOP10	Q9NPE3	64 aa	Known RBP	13.89	□□□□□ -0.19
TAF4-208	ENST00000609041	NTM-AS1	Q6ZSK4	140 aa		13.88	□□□□□ -0.19
TAF4-208	ENST00000609041	TMEM101	Q96IK0	257 aa		13.88	□□□□□ -0.19
TAF4-208	ENST00000609041	TRAV4	A0A0B4J268	109 aa		13.88	□□□□□ -0.19
TAF4-208	ENST00000609041	TRBV10-1	A0A0K0K1A3	114 aa		13.88	□□□□□ -0.19
TAF4-208	ENST00000609041	NDUFA7	O95182	113 aa		13.88	□□□□□ -0.19
TAF4-208	ENST00000609041	CARD19	Q96LW7	228 aa		13.88	□□□□□ -0.19
TAF4-208	ENST00000609041	YAE1D1	Q9NRH1	226 aa		13.88	□□□□□ -0.19
TAF4-208	ENST00000609041	NOTCH3	Q9UM47	2321 aa		13.87	□□□□□ -0.19
TAF4-208	ENST00000609041	LINC00242	Q5T6M2	205 aa		13.87	□□□□□ -0.19
TAF4-208	ENST00000609041	NIPBL	Q6KC79	2804 aa	eCLIP	13.86	□□□□□ -0.19
TAF4-208	ENST00000609041	GAGE12J	A6NER3	117 aa		13.86	□□□□□ -0.19
TAF4-208	ENST00000609041	GAGE4	Q13068	117 aa		13.86	□□□□□ -0.19
TAF4-208	ENST00000609041	GAGE5	Q13069	117 aa		13.86	□□□□□ -0.19
TAF4-208	ENST00000609041	RNASE1	P07998	156 aa	Known RBP	13.86	□□□□□ -0.19
TAF4-208	ENST00000609041	DAZ2	Q13117	558 aa	Known RBP	13.86	□□□□□ -0.19
TAF4-208	ENST00000609041	DAZ4	Q86SG3	579 aa	Known RBP	13.86	□□□□□ -0.19
TAF4-208	ENST00000609041	PPDPFL	Q8WWR9	84 aa		13.86	□□□□□ -0.19
TAF4-208	ENST00000609041	DAZ3	Q9NR90	486 aa	Known RBP	13.86	□□□□□ -0.19
TAF4-208	ENST00000609041		C9JAW5	83 aa		13.85	□□□□□ -0.19
TAF4-208	ENST00000609041	ANKRD29	Q8N6D5	301 aa		13.85	□□□□□ -0.19
TAF4-208	ENST00000609041	ACAN	P16112	2415 aa		13.85	□□□□□ -0.19
TAF4-208	ENST00000609041	TRIAP1	O43715	76 aa		13.85	□□□□□ -0.19
TAF4-208	ENST00000609041	SLC25A20	O43772	301 aa		13.85	□□□□□ -0.19
TAF4-208	ENST00000609041	RPL35A	P18077	110 aa	Known RBP	13.85	□□□□□ -0.19
TAF4-208	ENST00000609041	HERVK_113	P63121	156 aa		13.85	□□□□□ -0.19
TAF4-208	ENST00000609041	DAND5	Q8N907	189 aa		13.85	□□□□□ -0.19
TAF4-208	ENST00000609041	C16orf95	Q9H693	158 aa		13.85	□□□□□ -0.19
TAF4-208	ENST00000609041	JMJD1C	Q15652	2540 aa		13.84	□□□□□ -0.19
TAF4-208	ENST00000609041	NDUFA1	O15239	70 aa		13.84	□□□□□ -0.19
TAF4-208	ENST00000609041	TENM4	Q6N022	2769 aa		13.84	□□□□□ -0.19
TAF4-208	ENST00000609041	TRAV13-1	A0A0B4J241	112 aa		13.84	□□□□□ -0.19
TAF4-208	ENST00000609041	PLAC8L1	A1L4L8	177 aa		13.84	□□□□□ -0.19
TAF4-208	ENST00000609041	ANK3	Q12955	4377 aa	Known RBP	13.83	□□□□□ -0.2
TAF4-208	ENST00000609041	C19orf73	Q9NVV2	129 aa		13.83	□□□□□ -0.2
TAF4-208	ENST00000609041	CSDC2	Q9Y534	153 aa	Known RBP	13.83	□□□□□ -0.2
TAF4-208	ENST00000609041	TRBV30	A0A0K0K1B3	111 aa		13.83	□□□□□ -0.2
TAF4-208	ENST00000609041	TIMM17B	O60830	172 aa		13.83	□□□□□ -0.2
TAF4-208	ENST00000609041	IGLV1-51	P01701	117 aa		13.83	□□□□□ -0.2
TAF4-208	ENST00000609041	SETX	Q7Z333	2677 aa	Known RBP	13.82	□□□□□ -0.2
TAF4-208	ENST00000609041	IGLV5-39	A0A0G2JS06	123 aa		13.82	□□□□□ -0.2
TAF4-208	ENST00000609041	GAGE7	O76087	117 aa		13.82	□□□□□ -0.2
TAF4-208	ENST00000609041	GAGE12F	P0CL80	117 aa		13.82	□□□□□ -0.2
TAF4-208	ENST00000609041	GAGE12G	P0CL81	117 aa		13.82	□□□□□ -0.2
TAF4-208	ENST00000609041	GAGE12I	P0CL82	117 aa		13.82	□□□□□ -0.2
TAF4-208	ENST00000609041	CMC4	P56277	68 aa	Predicted RBP	13.82	□□□□□ -0.2
TAF4-208	ENST00000609041	ATXN8	Q156A1	80 aa		13.82	□□□□□ -0.2
TAF4-208	ENST00000609041	C16orf74	Q96GX8	76 aa		13.82	□□□□□ -0.2
TAF4-208	ENST00000609041	CDIP1	Q9H305	208 aa		13.82	□□□□□ -0.2
TAF4-208	ENST00000609041	PDZD2	O15018	2839 aa		13.82	□□□□□ -0.2
TAF4-208	ENST00000609041		Q9H8V8	135 aa		13.81	□□□□□ -0.2
TAF4-208	ENST00000609041	MTOR	P42345	2549 aa		13.81	□□□□□ -0.2
TAF4-208	ENST00000609041	TRGV2	A0A075B6R0	118 aa		13.81	□□□□□ -0.2
TAF4-208	ENST00000609041	FAM19A3	Q7Z5A8	133 aa		13.81	□□□□□ -0.2
TAF4-208	ENST00000609041	CDC42SE2	Q9NRR3	84 aa		13.81	□□□□□ -0.2
TAF4-208	ENST00000609041	ICOS	Q9Y6W8	199 aa		13.8	□□□□□ -0.2
TAF4-208	ENST00000609041	SMIM1	B2RUZ4	78 aa		13.8	□□□□□ -0.2
TAF4-208	ENST00000609041	SCGB1A1	P11684	91 aa		13.8	□□□□□ -0.2
TAF4-208	ENST00000609041	ZNF625	Q96I27	306 aa	Predicted RBP	13.8	□□□□□ -0.2
TAF4-208	ENST00000609041	C2CD3	Q4AC94	2353 aa		13.79	□□□□□ -0.2
TAF4-208	ENST00000609041	LOC100131303	A0A0U1RQF7	123 aa		13.79	□□□□□ -0.2
TAF4-208	ENST00000609041	PLA2G2A	P14555	144 aa		13.79	□□□□□ -0.2
TAF4-208	ENST00000609041	LINC01620	Q4KN68	170 aa		13.79	□□□□□ -0.2
TAF4-208	ENST00000609041	RNF183	Q96D59	192 aa		13.79	□□□□□ -0.2
TAF4-208	ENST00000609041	IFITM1	P13164	125 aa		13.79	□□□□□ -0.2
TAF4-208	ENST00000609041	CSNK1G2-AS1	Q8NCQ2	148 aa		13.79	□□□□□ -0.2
TAF4-208	ENST00000609041	FAM110A	Q9BQ89	295 aa		13.78	□□□□□ -0.2
TAF4-208	ENST00000609041		M0QXV9	152 aa		13.78	□□□□□ -0.2
TAF4-208	ENST00000609041	CIRBP	Q14011	172 aa	Known RBP	13.78	□□□□□ -0.2
TAF4-208	ENST00000609041		A0A0U1RRA0	63 aa		13.76	□□□□□ -0.21
TAF4-208	ENST00000609041	UBE2L6	O14933	153 aa		13.76	□□□□□ -0.21
TAF4-208	ENST00000609041	TMEM243	Q9BU79	118 aa		13.76	□□□□□ -0.21
TAF4-208	ENST00000609041		F5H768	121 aa		13.75	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms