RNA–Protein interactions for RNA: ENST00000605424.5

MMP28-201, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MMP28, Length 1,928 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-201ENST00000605424 GAGE12BA1L429 117 aa14.15□□□□□ -0.14
MMP28-201ENST00000605424 GAGE7O76087 117 aa14.15□□□□□ -0.14
MMP28-201ENST00000605424 GAGE12FP0CL80 117 aa14.15□□□□□ -0.14
MMP28-201ENST00000605424 GAGE12GP0CL81 117 aa14.15□□□□□ -0.14
MMP28-201ENST00000605424 GAGE12IP0CL82 117 aa14.15□□□□□ -0.14
MMP28-201ENST00000605424 DGAT2L7PQ6IED9 249 aa14.15□□□□□ -0.14
MMP28-201ENST00000605424 Q6ZUT4 128 aa14.15□□□□□ -0.14
MMP28-201ENST00000605424 GTSF1LQ9H1H1 148 aa14.15□□□□□ -0.14
MMP28-201ENST00000605424 IGLL5B9A064 214 aa14.14□□□□□ -0.15
MMP28-201ENST00000605424 NAA38Q9BRA0 125 aaKnown RBP14.14□□□□□ -0.15
MMP28-201ENST00000605424 SPCS1Q9Y6A9 102 aa14.14□□□□□ -0.15
MMP28-201ENST00000605424 ATRQ13535 2644 aa14.14□□□□□ -0.15
MMP28-201ENST00000605424 UBE2D1P51668 147 aa14.13□□□□□ -0.15
MMP28-201ENST00000605424 TIRAPP58753 221 aa14.13□□□□□ -0.15
MMP28-201ENST00000605424 IGHV1-58A0A0C4DH39 117 aa14.12□□□□□ -0.15
MMP28-201ENST00000605424 KIR2DL5BQ8NHK3 375 aa14.12□□□□□ -0.15
MMP28-201ENST00000605424 GAGE12JA6NER3 117 aa14.11□□□□□ -0.15
MMP28-201ENST00000605424 SMIM9A6NGZ8 99 aa14.11□□□□□ -0.15
MMP28-201ENST00000605424 IGHV3-30-3P0DP02 117 aa14.11□□□□□ -0.15
MMP28-201ENST00000605424 GAGE4Q13068 117 aa14.11□□□□□ -0.15
MMP28-201ENST00000605424 GAGE5Q13069 117 aa14.11□□□□□ -0.15
MMP28-201ENST00000605424 GAGE13Q4V321 117 aa14.11□□□□□ -0.15
MMP28-201ENST00000605424 RNASE13Q5GAN3 156 aaKnown RBP14.11□□□□□ -0.15
MMP28-201ENST00000605424 SBSPONQ8IVN8 264 aa14.11□□□□□ -0.15
MMP28-201ENST00000605424 CITED1Q99966 193 aa14.11□□□□□ -0.15
MMP28-201ENST00000605424 GEMIN7Q9H840 131 aaKnown RBP14.11□□□□□ -0.15
MMP28-201ENST00000605424 FBN1P35555 2871 aaKnown RBP14.11□□□□□ -0.15
MMP28-201ENST00000605424 NTM-AS1Q6ZSK4 140 aa14.11□□□□□ -0.15
MMP28-201ENST00000605424 IGLV5-45A0A087WSX0 123 aa14.1□□□□□ -0.15
MMP28-201ENST00000605424 TRGV4A0A0C4DH28 118 aa14.1□□□□□ -0.15
MMP28-201ENST00000605424 H7C423 109 aa14.1□□□□□ -0.15
MMP28-201ENST00000605424 IGHV3-30P01768 117 aa14.1□□□□□ -0.15
MMP28-201ENST00000605424 IGHV3-30-5P0DP03 117 aa14.1□□□□□ -0.15
MMP28-201ENST00000605424 FAM19A3Q7Z5A8 133 aa14.1□□□□□ -0.15
MMP28-201ENST00000605424 LINC00612Q8N6U2 182 aa14.09□□□□□ -0.15
MMP28-201ENST00000605424 VSIG2Q96IQ7 327 aa14.09□□□□□ -0.15
MMP28-201ENST00000605424 IGHV3-64A0A075B6Q5 118 aa14.08□□□□□ -0.16
MMP28-201ENST00000605424 FHL2Q14192 279 aa14.08□□□□□ -0.16
MMP28-201ENST00000605424 PRIMA1Q86XR5 153 aa14.08□□□□□ -0.16
MMP28-201ENST00000605424 TMEM238C9JI98 176 aa14.07□□□□□ -0.16
MMP28-201ENST00000605424 HERVK_113P63121 156 aa14.07□□□□□ -0.16
MMP28-201ENST00000605424 TMEM243Q9BU79 118 aa14.07□□□□□ -0.16
MMP28-201ENST00000605424 LINC00694P0DN24 101 aa14.07□□□□□ -0.16
MMP28-201ENST00000605424 TENM1Q9UKZ4 2725 aa14.07□□□□□ -0.16
MMP28-201ENST00000605424 C10orf126Q8N4M7 172 aa14.05□□□□□ -0.16
MMP28-201ENST00000605424 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.05□□□□□ -0.16
MMP28-201ENST00000605424 A0A0J9YXY3 114 aa14.05□□□□□ -0.16
MMP28-201ENST00000605424 UBE2L6O14933 153 aa14.05□□□□□ -0.16
MMP28-201ENST00000605424 CDC42SE2Q9NRR3 84 aa14.05□□□□□ -0.16
MMP28-201ENST00000605424 TRAV8-3A0A0A6YYJ7 113 aa14.04□□□□□ -0.16
MMP28-201ENST00000605424 TMEM101Q96IK0 257 aa14.04□□□□□ -0.16
MMP28-201ENST00000605424 X6R8D5 127 aa14.04□□□□□ -0.16
MMP28-201ENST00000605424 NDUFA12Q9UI09 145 aa14.03□□□□□ -0.16
MMP28-201ENST00000605424 RPL24P83731 157 aaKnown RBP14.03□□□□□ -0.16
MMP28-201ENST00000605424 LINC00242Q5T6M2 205 aa14.03□□□□□ -0.16
MMP28-201ENST00000605424 ZFAND6Q6FIF0 208 aa14.03□□□□□ -0.16
MMP28-201ENST00000605424 WFDC9Q8NEX5 89 aa14.03□□□□□ -0.16
MMP28-201ENST00000605424 CDKN2A-AS1Q9UH64 79 aa14.03□□□□□ -0.16
MMP28-201ENST00000605424 SPINK8P0C7L1 97 aa14.02□□□□□ -0.16
MMP28-201ENST00000605424 APOC4P55056 127 aa14.02□□□□□ -0.16
MMP28-201ENST00000605424 SPATA3Q8NHX4 192 aa14.02□□□□□ -0.16
MMP28-201ENST00000605424 PGPEP1Q9NXJ5 209 aa14.02□□□□□ -0.16
MMP28-201ENST00000605424 LOC100131303A0A0U1RQF7 123 aa14.01□□□□□ -0.17
MMP28-201ENST00000605424 LYRM9A8MSI8 78 aa14□□□□□ -0.17
MMP28-201ENST00000605424 CFC1BP0CG36 223 aa14□□□□□ -0.17
MMP28-201ENST00000605424 CFC1P0CG37 223 aa14□□□□□ -0.17
MMP28-201ENST00000605424 TRBV6-8A0A0A6YYG3 113 aa14□□□□□ -0.17
MMP28-201ENST00000605424 WIPF1O43516 503 aa14□□□□□ -0.17
MMP28-201ENST00000605424 APOMO95445 188 aa14□□□□□ -0.17
MMP28-201ENST00000605424 NOTCH3Q9UM47 2321 aa13.99□□□□□ -0.17
MMP28-201ENST00000605424 IGLV5-39A0A0G2JS06 123 aa13.99□□□□□ -0.17
MMP28-201ENST00000605424 TIMM17BO60830 172 aa13.99□□□□□ -0.17
MMP28-201ENST00000605424 DEFB130BP0DP73 79 aa13.99□□□□□ -0.17
MMP28-201ENST00000605424 DEFB130AP0DP74 79 aa13.99□□□□□ -0.17
MMP28-201ENST00000605424 COX6A2Q02221 97 aa13.99□□□□□ -0.17
MMP28-201ENST00000605424 OCIAD2Q56VL3 154 aa13.99□□□□□ -0.17
MMP28-201ENST00000605424 LYRM7Q5U5X0 104 aa13.99□□□□□ -0.17
MMP28-201ENST00000605424 SPANXDQ9BXN6 97 aa13.99□□□□□ -0.17
MMP28-201ENST00000605424 SPANXCQ9NY87 97 aa13.99□□□□□ -0.17
MMP28-201ENST00000605424 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.98□□□□□ -0.17
MMP28-201ENST00000605424 LITAFQ99732 161 aa13.98□□□□□ -0.17
MMP28-201ENST00000605424 TSPAN13O95857 204 aa13.98□□□□□ -0.17
MMP28-201ENST00000605424 MUSTN1Q8IVN3 82 aa13.98□□□□□ -0.17
MMP28-201ENST00000605424 PRO1854Q9UHT4 67 aa13.98□□□□□ -0.17
MMP28-201ENST00000605424 A0A0B4J2C4 111 aa13.97□□□□□ -0.17
MMP28-201ENST00000605424 A4D1N5 150 aa13.97□□□□□ -0.17
MMP28-201ENST00000605424 NDUFA1O15239 70 aa13.97□□□□□ -0.17
MMP28-201ENST00000605424 KRTAP24-1Q3LI83 254 aa13.97□□□□□ -0.17
MMP28-201ENST00000605424 COL6A5A8TX70 2615 aa13.97□□□□□ -0.17
MMP28-201ENST00000605424 TRAV13-1A0A0B4J241 112 aa13.96□□□□□ -0.17
MMP28-201ENST00000605424 F8W1H4 67 aa13.96□□□□□ -0.17
MMP28-201ENST00000605424 K7ERU9 68 aa13.96□□□□□ -0.18
MMP28-201ENST00000605424 PRO0255Q9UI72 69 aa13.95□□□□□ -0.18
MMP28-201ENST00000605424 RNF183Q96D59 192 aa13.94□□□□□ -0.18
MMP28-201ENST00000605424 MIAQ16674 131 aa13.94□□□□□ -0.18
MMP28-201ENST00000605424 A8MZ25 164 aa13.93□□□□□ -0.18
MMP28-201ENST00000605424 SMIM1B2RUZ4 78 aa13.93□□□□□ -0.18
MMP28-201ENST00000605424 ATP6V0E2Q8NHE4 81 aa13.93□□□□□ -0.18
MMP28-201ENST00000605424 STAB1Q9NY15 2570 aa13.92□□□□□ -0.18
MMP28-201ENST00000605424 IFITM1P13164 125 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms