RNA–Protein interactions for RNA: ENST00000600440.5

SYDE1-204, Transcript of synapse defective Rho GTPase homolog 1, humanhuman

TSL 1 (best) BASIC

Gene SYDE1, Length 3,058 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE1-204ENST00000600440 C5orf38Q86SI9 138 aa11.72□□□□□ -0.53
SYDE1-204ENST00000600440 UBE2D4Q9Y2X8 147 aa11.72□□□□□ -0.53
SYDE1-204ENST00000600440 ATP5G1P05496 136 aa11.71□□□□□ -0.53
SYDE1-204ENST00000600440 INAFM2P0DMQ5 153 aa11.71□□□□□ -0.53
SYDE1-204ENST00000600440 PYGO1Q9Y3Y4 419 aa11.71□□□□□ -0.53
SYDE1-204ENST00000600440 IGF2-ASQ6U949 168 aa11.71□□□□□ -0.54
SYDE1-204ENST00000600440 CSMD2Q7Z408 3487 aa11.71□□□□□ -0.54
SYDE1-204ENST00000600440 NDUFA1O15239 70 aa11.7□□□□□ -0.54
SYDE1-204ENST00000600440 CRYGAP11844 174 aa11.7□□□□□ -0.54
SYDE1-204ENST00000600440 MALP21145 153 aa11.7□□□□□ -0.54
SYDE1-204ENST00000600440 BPESC1Q9GZL8 116 aa11.7□□□□□ -0.54
SYDE1-204ENST00000600440 ZNF292O60281 2723 aa11.7□□□□□ -0.54
SYDE1-204ENST00000600440 SNRPD3P62318 126 aaKnown RBP11.7□□□□□ -0.54
SYDE1-204ENST00000600440 RPL18AQ02543 176 aaKnown RBP11.69□□□□□ -0.54
SYDE1-204ENST00000600440 CHCHD7Q9BUK0 85 aa11.69□□□□□ -0.54
SYDE1-204ENST00000600440 IGKV3OR2-268A0A0C4DH90 116 aa11.69□□□□□ -0.54
SYDE1-204ENST00000600440 WFDC9Q8NEX5 89 aa11.68□□□□□ -0.54
SYDE1-204ENST00000600440 DPH3Q96FX2 82 aa11.68□□□□□ -0.54
SYDE1-204ENST00000600440 C22orf24Q9Y442 160 aa11.68□□□□□ -0.54
SYDE1-204ENST00000600440 OXTP01178 125 aa11.68□□□□□ -0.54
SYDE1-204ENST00000600440 C10orf105Q8TEF2 133 aa11.68□□□□□ -0.54
SYDE1-204ENST00000600440 TOMM7Q9P0U1 55 aa11.68□□□□□ -0.54
SYDE1-204ENST00000600440 CXCL5P42830 114 aa11.68□□□□□ -0.54
SYDE1-204ENST00000600440 H3BUX3 64 aa11.67□□□□□ -0.54
SYDE1-204ENST00000600440 SLPIP03973 132 aa11.67□□□□□ -0.54
SYDE1-204ENST00000600440 LINC00846Q9NV44 126 aa11.67□□□□□ -0.54
SYDE1-204ENST00000600440 VPS13CQ709C8 3753 aa11.67□□□□□ -0.54
SYDE1-204ENST00000600440 NCR3O14931 201 aa11.66□□□□□ -0.54
SYDE1-204ENST00000600440 C10orf99Q6UWK7 81 aa11.66□□□□□ -0.54
SYDE1-204ENST00000600440 A0A087WYN8 130 aa11.66□□□□□ -0.54
SYDE1-204ENST00000600440 TIMM17BO60830 172 aa11.66□□□□□ -0.54
SYDE1-204ENST00000600440 RBMY1A1P0DJD3 496 aaKnown RBP11.66□□□□□ -0.54
SYDE1-204ENST00000600440 RBMY1CP0DJD4 496 aa11.66□□□□□ -0.54
SYDE1-204ENST00000600440 RBMY1FQ15415 496 aaKnown RBP11.66□□□□□ -0.54
SYDE1-204ENST00000600440 BEAN1Q3B7T3 259 aa11.66□□□□□ -0.54
SYDE1-204ENST00000600440 HIVEP3Q5T1R4 2406 aa11.65□□□□□ -0.54
SYDE1-204ENST00000600440 CRPP02741 224 aa11.65□□□□□ -0.54
SYDE1-204ENST00000600440 USP17L23D6RBM5 183 aa11.65□□□□□ -0.54
SYDE1-204ENST00000600440 USMG5Q96IX5 58 aa11.65□□□□□ -0.54
SYDE1-204ENST00000600440 MYO9AB2RTY4 2548 aa11.65□□□□□ -0.55
SYDE1-204ENST00000600440 IGHV3OR16-12A0A075B7B8 117 aa11.64□□□□□ -0.55
SYDE1-204ENST00000600440 HILS1P60008 231 aa11.64□□□□□ -0.55
SYDE1-204ENST00000600440 KLK9Q2XQG4 91 aa11.64□□□□□ -0.55
SYDE1-204ENST00000600440 SERP2Q8N6R1 65 aa11.64□□□□□ -0.55
SYDE1-204ENST00000600440 ABCA2Q9BZC7 2435 aa11.63□□□□□ -0.55
SYDE1-204ENST00000600440 TRAV25A0A0B4J276 109 aa11.63□□□□□ -0.55
SYDE1-204ENST00000600440 F5H768 121 aa11.63□□□□□ -0.55
SYDE1-204ENST00000600440 A0A1W2PPR1 153 aa11.63□□□□□ -0.55
SYDE1-204ENST00000600440 LINC00242Q5T6M2 205 aa11.63□□□□□ -0.55
SYDE1-204ENST00000600440 C19orf54Q5BKX5 351 aa11.62□□□□□ -0.55
SYDE1-204ENST00000600440 PIMREGQ9BSJ6 248 aa11.62□□□□□ -0.55
SYDE1-204ENST00000600440 LECT2O14960 151 aa11.62□□□□□ -0.55
SYDE1-204ENST00000600440 RNASE1P07998 156 aaKnown RBP11.62□□□□□ -0.55
SYDE1-204ENST00000600440 TMEM258P61165 79 aa11.62□□□□□ -0.55
SYDE1-204ENST00000600440 CFHR3Q02985 330 aa11.62□□□□□ -0.55
SYDE1-204ENST00000600440 TRAV23DV6A0A075B6W5 121 aa11.61□□□□□ -0.55
SYDE1-204ENST00000600440 HIST2H2BCQ6DN03 193 aa11.61□□□□□ -0.55
SYDE1-204ENST00000600440 HIST2H2BDQ6DRA6 164 aa11.61□□□□□ -0.55
SYDE1-204ENST00000600440 C11orf71Q6IPW1 123 aa11.61□□□□□ -0.55
SYDE1-204ENST00000600440 SETD2Q9BYW2 2564 aaPredicted RBP11.61□□□□□ -0.55
SYDE1-204ENST00000600440 IGHV3-53P01767 116 aa11.61□□□□□ -0.55
SYDE1-204ENST00000600440 IGHV4-38-2P0DP08 117 aa11.61□□□□□ -0.55
SYDE1-204ENST00000600440 LINC01561Q8N1V8 128 aa11.61□□□□□ -0.55
SYDE1-204ENST00000600440 USP9YO00507 2555 aaPredicted RBP11.6□□□□□ -0.55
SYDE1-204ENST00000600440 SMIM1B2RUZ4 78 aa11.6□□□□□ -0.55
SYDE1-204ENST00000600440 MIR7-3HGQ8N6C7 128 aa11.6□□□□□ -0.55
SYDE1-204ENST00000600440 LINC00337Q8N6G1 96 aa11.6□□□□□ -0.55
SYDE1-204ENST00000600440 JMJD1CQ15652 2540 aa11.6□□□□□ -0.55
SYDE1-204ENST00000600440 RPS28P62857 69 aaKnown RBP11.6□□□□□ -0.55
SYDE1-204ENST00000600440 LINC00158P58513 81 aa11.59□□□□□ -0.55
SYDE1-204ENST00000600440 SND1-IT1Q9HBX3 110 aa11.59□□□□□ -0.55
SYDE1-204ENST00000600440 MUC6Q6W4X9 2439 aa11.59□□□□□ -0.55
SYDE1-204ENST00000600440 LMO4P61968 165 aa11.58□□□□□ -0.55
SYDE1-204ENST00000600440 COPS9Q8WXC6 57 aa11.58□□□□□ -0.55
SYDE1-204ENST00000600440 C11orf68Q9H3H3 251 aaKnown RBP11.58□□□□□ -0.55
SYDE1-204ENST00000600440 PFN2P35080 140 aa11.58□□□□□ -0.56
SYDE1-204ENST00000600440 DEFB131AP59861 70 aa11.58□□□□□ -0.56
SYDE1-204ENST00000600440 SMIM11BQ8TCY0 68 aa11.58□□□□□ -0.56
SYDE1-204ENST00000600440 RPL36AP83881 106 aaKnown RBP11.57□□□□□ -0.56
SYDE1-204ENST00000600440 FHL2Q14192 279 aa11.57□□□□□ -0.56
SYDE1-204ENST00000600440 RPL36ALQ969Q0 106 aaKnown RBP11.57□□□□□ -0.56
SYDE1-204ENST00000600440 FAM222AQ5U5X8 452 aa11.57□□□□□ -0.56
SYDE1-204ENST00000600440 K7EQG2 157 aa11.56□□□□□ -0.56
SYDE1-204ENST00000600440 C20orf197Q8N268 126 aa11.56□□□□□ -0.56
SYDE1-204ENST00000600440 GHRHP01286 108 aa11.56□□□□□ -0.56
SYDE1-204ENST00000600440 TRAV13-2A0A0B4J235 113 aa11.55□□□□□ -0.56
SYDE1-204ENST00000600440 IGLV5-39A0A0G2JS06 123 aa11.55□□□□□ -0.56
SYDE1-204ENST00000600440 PAX4O43316 350 aa11.54□□□□□ -0.56
SYDE1-204ENST00000600440 UPK3BQ9BT76 320 aa11.54□□□□□ -0.56
SYDE1-204ENST00000600440 TLN2Q9Y4G6 2542 aa11.54□□□□□ -0.56
SYDE1-204ENST00000600440 Q6JHZ5 121 aa11.54□□□□□ -0.56
SYDE1-204ENST00000600440 PTPN13Q12923 2485 aa11.54□□□□□ -0.56
SYDE1-204ENST00000600440 NCOR2Q9Y618 2525 aa11.54□□□□□ -0.56
SYDE1-204ENST00000600440 SONP18583 2426 aaKnown RBP11.54□□□□□ -0.56
SYDE1-204ENST00000600440 FAM19A1Q7Z5A9 133 aa11.54□□□□□ -0.56
SYDE1-204ENST00000600440 CHD8Q9HCK8 2581 aa11.53□□□□□ -0.56
SYDE1-204ENST00000600440 Q5XG85 94 aa11.53□□□□□ -0.56
SYDE1-204ENST00000600440 TMEM243Q9BU79 118 aa11.53□□□□□ -0.56
SYDE1-204ENST00000600440 IGKV2-28A0A075B6P5 120 aa11.52□□□□□ -0.56
SYDE1-204ENST00000600440 IGKV2D-28P01615 120 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms