RNA–Protein interactions for RNA: ENST00000595343.5

PDE4C-208, Transcript of phosphodiesterase 4C, humanhuman

TSL 1 (best)

Gene PDE4C, Length 420 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-208ENST00000595343 A0A1B0GW15 77 aa11.84□□□□□ -0.51
PDE4C-208ENST00000595343 hDV102S1A0JD36 115 aa11.84□□□□□ -0.51
PDE4C-208ENST00000595343 REG3AQ06141 175 aa11.84□□□□□ -0.51
PDE4C-208ENST00000595343 DPH3Q96FX2 82 aa11.84□□□□□ -0.51
PDE4C-208ENST00000595343 A0A1B0GXF2 115 aa11.83□□□□□ -0.52
PDE4C-208ENST00000595343 S100A8P05109 93 aa11.83□□□□□ -0.52
PDE4C-208ENST00000595343 OR5AL1P0C617 328 aa11.83□□□□□ -0.52
PDE4C-208ENST00000595343 SSTP61278 116 aa11.83□□□□□ -0.52
PDE4C-208ENST00000595343 IQCJQ1A5X6 159 aa11.83□□□□□ -0.52
PDE4C-208ENST00000595343 TMEM136Q6ZRR5 245 aa11.83□□□□□ -0.52
PDE4C-208ENST00000595343 MRPL18Q9H0U6 180 aaKnown RBP11.83□□□□□ -0.52
PDE4C-208ENST00000595343 KIF25-AS1Q9Y6Z4 181 aa11.83□□□□□ -0.52
PDE4C-208ENST00000595343 IGHV3-64A0A075B6Q5 118 aa11.82□□□□□ -0.52
PDE4C-208ENST00000595343 A0A087WYN8 130 aa11.82□□□□□ -0.52
PDE4C-208ENST00000595343 NDUFA6P56556 154 aa11.82□□□□□ -0.52
PDE4C-208ENST00000595343 GTSF1Q8WW33 167 aa11.82□□□□□ -0.52
PDE4C-208ENST00000595343 RNF185Q96GF1 192 aa11.82□□□□□ -0.52
PDE4C-208ENST00000595343 RNF213Q63HN8 5207 aa11.81□□□□□ -0.52
PDE4C-208ENST00000595343 IGHV1-24A0A0C4DH33 117 aa11.81□□□□□ -0.52
PDE4C-208ENST00000595343 SLPIP03973 132 aa11.81□□□□□ -0.52
PDE4C-208ENST00000595343 CHTF8P0CG12 524 aa11.81□□□□□ -0.52
PDE4C-208ENST00000595343 SMIM17P0DL12 118 aa11.81□□□□□ -0.52
PDE4C-208ENST00000595343 HBBP68871 147 aa11.81□□□□□ -0.52
PDE4C-208ENST00000595343 MRPL54Q6P161 138 aaKnown RBP11.81□□□□□ -0.52
PDE4C-208ENST00000595343 GATD1Q8NB37 220 aa11.81□□□□□ -0.52
PDE4C-208ENST00000595343 C20orf203Q8NBC4 194 aa11.81□□□□□ -0.52
PDE4C-208ENST00000595343 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.8□□□□□ -0.52
PDE4C-208ENST00000595343 TRAV8-4A0A0B4J246 113 aa11.8□□□□□ -0.52
PDE4C-208ENST00000595343 SPACA4Q8TDM5 124 aa11.8□□□□□ -0.52
PDE4C-208ENST00000595343 AP5S1Q9NUS5 200 aa11.8□□□□□ -0.52
PDE4C-208ENST00000595343 RIGQ13278 110 aa11.79□□□□□ -0.52
PDE4C-208ENST00000595343 BORCS7Q96B45 105 aa11.79□□□□□ -0.52
PDE4C-208ENST00000595343 AP1S3Q96PC3 154 aa11.79□□□□□ -0.52
PDE4C-208ENST00000595343 A0A1B0GUT8 65 aa11.78□□□□□ -0.52
PDE4C-208ENST00000595343 IGLV4-60A0A075B6I1 120 aa11.77□□□□□ -0.53
PDE4C-208ENST00000595343 A0A1B0GUV1 79 aa11.77□□□□□ -0.53
PDE4C-208ENST00000595343 M0QY20 66 aa11.77□□□□□ -0.53
PDE4C-208ENST00000595343 APCSP02743 223 aa11.77□□□□□ -0.53
PDE4C-208ENST00000595343 IGLC6P0CF74 106 aa11.77□□□□□ -0.53
PDE4C-208ENST00000595343 CTRLP40313 264 aa11.77□□□□□ -0.53
PDE4C-208ENST00000595343 HIST3H2BBQ8N257 126 aa11.77□□□□□ -0.53
PDE4C-208ENST00000595343 PGLYRP4Q96LB8 373 aa11.77□□□□□ -0.53
PDE4C-208ENST00000595343 PLAC8Q9NZF1 115 aa11.77□□□□□ -0.53
PDE4C-208ENST00000595343 TNXBP22105 4242 aa11.76□□□□□ -0.53
PDE4C-208ENST00000595343 MGPP08493 103 aa11.76□□□□□ -0.53
PDE4C-208ENST00000595343 GZMBP10144 247 aa11.76□□□□□ -0.53
PDE4C-208ENST00000595343 DPH3P1Q9H4G8 78 aa11.76□□□□□ -0.53
PDE4C-208ENST00000595343 H7C1H1 209 aa11.75□□□□□ -0.53
PDE4C-208ENST00000595343 C7orf33Q8WU49 177 aa11.75□□□□□ -0.53
PDE4C-208ENST00000595343 TMEM243Q9BU79 118 aa11.75□□□□□ -0.53
PDE4C-208ENST00000595343 CNFNQ9BYD5 112 aa11.75□□□□□ -0.53
PDE4C-208ENST00000595343 F2Z2F3 143 aa11.74□□□□□ -0.53
PDE4C-208ENST00000595343 ESDP10768 282 aa11.74□□□□□ -0.53
PDE4C-208ENST00000595343 AKR1D1P51857 326 aa11.74□□□□□ -0.53
PDE4C-208ENST00000595343 SUMO4Q6EEV6 95 aa11.74□□□□□ -0.53
PDE4C-208ENST00000595343 S100A2P29034 98 aa11.73□□□□□ -0.53
PDE4C-208ENST00000595343 FER1L6-AS1Q8NA97 138 aa11.73□□□□□ -0.53
PDE4C-208ENST00000595343 LINC01600Q96MT4 127 aa11.73□□□□□ -0.53
PDE4C-208ENST00000595343 SMIM6P0DI80 62 aa11.72□□□□□ -0.53
PDE4C-208ENST00000595343 CAMPP49913 170 aa11.72□□□□□ -0.53
PDE4C-208ENST00000595343 COX6A2Q02221 97 aa11.72□□□□□ -0.53
PDE4C-208ENST00000595343 C15orf56Q8N910 161 aa11.72□□□□□ -0.53
PDE4C-208ENST00000595343 TPPP3Q9BW30 176 aa11.72□□□□□ -0.53
PDE4C-208ENST00000595343 LYZL1Q6UWQ5 148 aa11.71□□□□□ -0.53
PDE4C-208ENST00000595343 PACRGQ96M98 296 aaPredicted RBP11.71□□□□□ -0.53
PDE4C-208ENST00000595343 IFITM10A6NMD0 228 aa11.7□□□□□ -0.54
PDE4C-208ENST00000595343 ODF1Q14990 250 aa11.7□□□□□ -0.54
PDE4C-208ENST00000595343 CFAP161Q6P656 301 aa11.7□□□□□ -0.54
PDE4C-208ENST00000595343 LINC00518Q8N0U6 118 aa11.7□□□□□ -0.54
PDE4C-208ENST00000595343 TMEM18Q96B42 140 aa11.7□□□□□ -0.54
PDE4C-208ENST00000595343 GAGE12HA6NDE8 117 aa11.69□□□□□ -0.54
PDE4C-208ENST00000595343 UBE2L6O14933 153 aa11.69□□□□□ -0.54
PDE4C-208ENST00000595343 PRR3P79522 188 aaKnown RBP11.69□□□□□ -0.54
PDE4C-208ENST00000595343 MAJINQ3KP22 176 aa11.69□□□□□ -0.54
PDE4C-208ENST00000595343 PRSS3P2Q8NHM4 247 aa11.69□□□□□ -0.54
PDE4C-208ENST00000595343 HIST1H2BLQ99880 126 aa11.69□□□□□ -0.54
PDE4C-208ENST00000595343 ALKBH7Q9BT30 221 aaPredicted RBP11.69□□□□□ -0.54
PDE4C-208ENST00000595343 IGKV2-24A0A0C4DH68 120 aa11.68□□□□□ -0.54
PDE4C-208ENST00000595343 CACNG7P62955 275 aa11.68□□□□□ -0.54
PDE4C-208ENST00000595343 BAGE3Q86Y29 109 aa11.68□□□□□ -0.54
PDE4C-208ENST00000595343 NIT2Q9NQR4 276 aa11.68□□□□□ -0.54
PDE4C-208ENST00000595343 AMTP48728 403 aa11.67□□□□□ -0.54
PDE4C-208ENST00000595343 COTL1Q14019 142 aa11.67□□□□□ -0.54
PDE4C-208ENST00000595343 HIGD2BQ4VC39 106 aa11.67□□□□□ -0.54
PDE4C-208ENST00000595343 C18orf32Q8TCD1 76 aa11.67□□□□□ -0.54
PDE4C-208ENST00000595343 KIAA1644Q3SXP7 199 aa11.66□□□□□ -0.54
PDE4C-208ENST00000595343 STPG4Q8N801 248 aa11.66□□□□□ -0.54
PDE4C-208ENST00000595343 TMEM191AQ9H0A3 160 aa11.66□□□□□ -0.54
PDE4C-208ENST00000595343 IGKV3OR2-268A0A0C4DH90 116 aa11.65□□□□□ -0.54
PDE4C-208ENST00000595343 A0A0J9YXV3 536 aa11.65□□□□□ -0.54
PDE4C-208ENST00000595343 FABP4P15090 132 aa11.65□□□□□ -0.54
PDE4C-208ENST00000595343 FAM104BQ5XKR9 115 aa11.65□□□□□ -0.54
PDE4C-208ENST00000595343 SERF1AO75920 110 aa11.64□□□□□ -0.55
PDE4C-208ENST00000595343 LINC00310P59036 64 aa11.64□□□□□ -0.55
PDE4C-208ENST00000595343 PDZD11Q5EBL8 140 aa11.64□□□□□ -0.55
PDE4C-208ENST00000595343 OR10D4PQ8NGN7 298 aa11.64□□□□□ -0.55
PDE4C-208ENST00000595343 PPBPP02775 128 aa11.63□□□□□ -0.55
PDE4C-208ENST00000595343 NTF3P20783 257 aa11.63□□□□□ -0.55
PDE4C-208ENST00000595343 KRTAP10-8P60410 259 aa11.63□□□□□ -0.55
PDE4C-208ENST00000595343 TWIST1Q15672 202 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms