RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 GAGE2AQ6NT46 116 aa11.32□□□□□ -0.6
PNKP-204ENST00000594661 ZNF22P17026 224 aaPredicted RBP11.32□□□□□ -0.6
PNKP-204ENST00000594661 S100A4P26447 101 aaKnown RBP11.32□□□□□ -0.6
PNKP-204ENST00000594661 C11orf44Q8N8P7 122 aa11.32□□□□□ -0.6
PNKP-204ENST00000594661 F5H768 121 aa11.31□□□□□ -0.6
PNKP-204ENST00000594661 J3QQQ9 107 aa11.31□□□□□ -0.6
PNKP-204ENST00000594661 LY6G6DO95868 133 aa11.31□□□□□ -0.6
PNKP-204ENST00000594661 APRG1Q8IVJ8 170 aa11.31□□□□□ -0.6
PNKP-204ENST00000594661 C2orf48Q96LS8 159 aa11.31□□□□□ -0.6
PNKP-204ENST00000594661 TMEM223A0PJW6 202 aa11.3□□□□□ -0.6
PNKP-204ENST00000594661 K7EQG2 157 aa11.3□□□□□ -0.6
PNKP-204ENST00000594661 LINC00643Q86TS7 51 aa11.3□□□□□ -0.6
PNKP-204ENST00000594661 MUSTN1Q8IVN3 82 aa11.3□□□□□ -0.6
PNKP-204ENST00000594661 M0R381 172 aa11.3□□□□□ -0.6
PNKP-204ENST00000594661 SPRY2O43597 315 aa11.3□□□□□ -0.6
PNKP-204ENST00000594661 TSHBP01222 138 aa11.29□□□□□ -0.6
PNKP-204ENST00000594661 CD28P10747 220 aa11.29□□□□□ -0.6
PNKP-204ENST00000594661 CXCL5P42830 114 aa11.29□□□□□ -0.6
PNKP-204ENST00000594661 HILS1P60008 231 aa11.29□□□□□ -0.6
PNKP-204ENST00000594661 LINC01006Q8NI28 216 aa11.29□□□□□ -0.6
PNKP-204ENST00000594661 MRAPQ8TCY5 172 aa11.29□□□□□ -0.6
PNKP-204ENST00000594661 GNRH2O43555 120 aa11.29□□□□□ -0.6
PNKP-204ENST00000594661 SDIM1Q6ZPB5 146 aa11.29□□□□□ -0.6
PNKP-204ENST00000594661 PHLDA3Q9Y5J5 127 aa11.29□□□□□ -0.6
PNKP-204ENST00000594661 HIVEP2P31629 2446 aa11.28□□□□□ -0.6
PNKP-204ENST00000594661 A0A1W2PRX2 142 aa11.28□□□□□ -0.6
PNKP-204ENST00000594661 LGALS3P17931 250 aaKnown RBP11.28□□□□□ -0.6
PNKP-204ENST00000594661 SNRPD3P62318 126 aaKnown RBP11.28□□□□□ -0.6
PNKP-204ENST00000594661 C5orf38Q86SI9 138 aa11.28□□□□□ -0.6
PNKP-204ENST00000594661 C16orf95Q9H693 158 aa11.28□□□□□ -0.6
PNKP-204ENST00000594661 KLLNB2CW77 178 aa11.27□□□□□ -0.6
PNKP-204ENST00000594661 KIR2DL5BQ8NHK3 375 aa11.27□□□□□ -0.6
PNKP-204ENST00000594661 ICOSQ9Y6W8 199 aa11.27□□□□□ -0.6
PNKP-204ENST00000594661 IGIPA6NJ69 53 aa11.27□□□□□ -0.61
PNKP-204ENST00000594661 LST1O00453 97 aa11.27□□□□□ -0.61
PNKP-204ENST00000594661 PEMTQ9UBM1 199 aa11.27□□□□□ -0.61
PNKP-204ENST00000594661 BAHCC1Q9P281 2608 aa11.26□□□□□ -0.61
PNKP-204ENST00000594661 SMCR5Q8TEV8 140 aa11.26□□□□□ -0.61
PNKP-204ENST00000594661 DPH3Q96FX2 82 aa11.26□□□□□ -0.61
PNKP-204ENST00000594661 A0A0J9YX75 114 aa11.26□□□□□ -0.61
PNKP-204ENST00000594661 MED14OSP0DP75 135 aa11.26□□□□□ -0.61
PNKP-204ENST00000594661 RNASE3P12724 160 aaKnown RBP11.26□□□□□ -0.61
PNKP-204ENST00000594661 TMEM258P61165 79 aa11.26□□□□□ -0.61
PNKP-204ENST00000594661 HIST1H4AP62805 103 aaKnown RBP11.26□□□□□ -0.61
PNKP-204ENST00000594661 ZNF256Q9Y2P7 627 aaPredicted RBP11.26□□□□□ -0.61
PNKP-204ENST00000594661 LEPROTO15243 131 aa11.25□□□□□ -0.61
PNKP-204ENST00000594661 IGKV3-20P01619 116 aa11.25□□□□□ -0.61
PNKP-204ENST00000594661 RPL39LQ96EH5 51 aaKnown RBP11.25□□□□□ -0.61
PNKP-204ENST00000594661 TMEM141Q96I45 108 aa11.25□□□□□ -0.61
PNKP-204ENST00000594661 SETD2Q9BYW2 2564 aaPredicted RBP11.24□□□□□ -0.61
PNKP-204ENST00000594661 TRAV12-3A0A0B4J271 114 aa11.24□□□□□ -0.61
PNKP-204ENST00000594661 SDHAF1A6NFY7 115 aa11.24□□□□□ -0.61
PNKP-204ENST00000594661 COX6CP09669 75 aa11.24□□□□□ -0.61
PNKP-204ENST00000594661 ZNF876PQ49A33 203 aa11.24□□□□□ -0.61
PNKP-204ENST00000594661 DPH3P1Q9H4G8 78 aa11.24□□□□□ -0.61
PNKP-204ENST00000594661 TRACP01848 142 aa11.23□□□□□ -0.61
PNKP-204ENST00000594661 TMEM61Q8N0U2 210 aa11.23□□□□□ -0.61
PNKP-204ENST00000594661 ATOX1O00244 68 aa11.23□□□□□ -0.61
PNKP-204ENST00000594661 TIMM17AQ99595 171 aa11.23□□□□□ -0.61
PNKP-204ENST00000594661 INAFM1C9JVW0 142 aa11.22□□□□□ -0.61
PNKP-204ENST00000594661 CCL24O00175 119 aa11.22□□□□□ -0.61
PNKP-204ENST00000594661 PPP1R17O96001 155 aa11.22□□□□□ -0.61
PNKP-204ENST00000594661 MGPP08493 103 aa11.22□□□□□ -0.61
PNKP-204ENST00000594661 Q5XG85 94 aa11.22□□□□□ -0.61
PNKP-204ENST00000594661 TP53TG1Q9Y2A0 90 aa11.22□□□□□ -0.61
PNKP-204ENST00000594661 MUC4Q99102 2169 aa11.22□□□□□ -0.61
PNKP-204ENST00000594661 TRAV12-2A0A075B6T6 113 aa11.21□□□□□ -0.61
PNKP-204ENST00000594661 DYNLRB2Q8TF09 96 aa11.21□□□□□ -0.61
PNKP-204ENST00000594661 SORL1Q92673 2214 aa11.21□□□□□ -0.61
PNKP-204ENST00000594661 hADV29S1A0JD25 119 aa11.21□□□□□ -0.62
PNKP-204ENST00000594661 OXTP01178 125 aa11.21□□□□□ -0.62
PNKP-204ENST00000594661 DEFB114Q30KQ6 69 aa11.21□□□□□ -0.62
PNKP-204ENST00000594661 SETXQ7Z333 2677 aaKnown RBP11.2□□□□□ -0.62
PNKP-204ENST00000594661 C4orf26Q17RF5 130 aa11.2□□□□□ -0.62
PNKP-204ENST00000594661 CLEC2BQ92478 149 aa11.2□□□□□ -0.62
PNKP-204ENST00000594661 NXPH4O95158 308 aa11.2□□□□□ -0.62
PNKP-204ENST00000594661 SPINK13Q1W4C9 94 aa11.2□□□□□ -0.62
PNKP-204ENST00000594661 KNCNA6PVL3 124 aa11.19□□□□□ -0.62
PNKP-204ENST00000594661 PROK1P58294 105 aa11.19□□□□□ -0.62
PNKP-204ENST00000594661 DEFB131AP59861 70 aa11.19□□□□□ -0.62
PNKP-204ENST00000594661 CYSTM1Q9H1C7 97 aa11.19□□□□□ -0.62
PNKP-204ENST00000594661 HIVEP1P15822 2718 aa11.18□□□□□ -0.62
PNKP-204ENST00000594661 LITAFQ99732 161 aa11.18□□□□□ -0.62
PNKP-204ENST00000594661 NSD1Q96L73 2696 aaPredicted RBP11.18□□□□□ -0.62
PNKP-204ENST00000594661 A0A0J9YXY3 114 aa11.18□□□□□ -0.62
PNKP-204ENST00000594661 ADARB2-AS1A8MUL3 147 aa11.17□□□□□ -0.62
PNKP-204ENST00000594661 HRCT1Q6UXD1 115 aa11.17□□□□□ -0.62
PNKP-204ENST00000594661 WNK1Q9H4A3 2382 aa11.17□□□□□ -0.62
PNKP-204ENST00000594661 UPK3BQ9BT76 320 aa11.17□□□□□ -0.62
PNKP-204ENST00000594661 JPT2Q9H910 190 aa11.17□□□□□ -0.62
PNKP-204ENST00000594661 NIPBLQ6KC79 2804 aaeCLIP11.16□□□□□ -0.62
PNKP-204ENST00000594661 IGHV3-16A0A0C4DH30 117 aa11.16□□□□□ -0.62
PNKP-204ENST00000594661 I3L3M4 83 aa11.16□□□□□ -0.62
PNKP-204ENST00000594661 MAP6D1Q9H9H5 199 aa11.16□□□□□ -0.62
PNKP-204ENST00000594661 KIF25-AS1Q9Y6Z4 181 aa11.16□□□□□ -0.62
PNKP-204ENST00000594661 TIMM21Q9BVV7 248 aa11.15□□□□□ -0.62
PNKP-204ENST00000594661 IGHV1OR15-1A0A075B7D0 117 aa11.15□□□□□ -0.62
PNKP-204ENST00000594661 A0A087WWL8 130 aa11.15□□□□□ -0.62
PNKP-204ENST00000594661 LINC00315P59091 139 aa11.15□□□□□ -0.62
PNKP-204ENST00000594661 KRTAP10-3P60369 221 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 498.9 ms