RNA–Protein interactions for RNA: ENST00000592533.5

ZNF540-210, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF540, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-210ENST00000592533 PPDPFQ9H3Y8 114 aa8.33□□□□□ -1.08
ZNF540-210ENST00000592533 UBR5O95071 2799 aaPredicted RBP8.33□□□□□ -1.08
ZNF540-210ENST00000592533 COX6CP09669 75 aa8.32□□□□□ -1.08
ZNF540-210ENST00000592533 LINC00242Q5T6M2 205 aa8.32□□□□□ -1.08
ZNF540-210ENST00000592533 NTN5Q8WTR8 489 aaPredicted RBP8.32□□□□□ -1.08
ZNF540-210ENST00000592533 LST1O00453 97 aa8.32□□□□□ -1.08
ZNF540-210ENST00000592533 DAZ2Q13117 558 aaKnown RBP8.32□□□□□ -1.08
ZNF540-210ENST00000592533 DAZ4Q86SG3 579 aaKnown RBP8.32□□□□□ -1.08
ZNF540-210ENST00000592533 DAZ3Q9NR90 486 aaKnown RBP8.32□□□□□ -1.08
ZNF540-210ENST00000592533 H7C423 109 aa8.31□□□□□ -1.08
ZNF540-210ENST00000592533 COX6A2Q02221 97 aa8.31□□□□□ -1.08
ZNF540-210ENST00000592533 KRTAP10-9P60411 292 aa8.31□□□□□ -1.08
ZNF540-210ENST00000592533 DEFB121Q5J5C9 76 aa8.31□□□□□ -1.08
ZNF540-210ENST00000592533 KRTAP1-3Q8IUG1 177 aa8.31□□□□□ -1.08
ZNF540-210ENST00000592533 XCL2Q9UBD3 114 aa8.31□□□□□ -1.08
ZNF540-210ENST00000592533 ACACBO00763 2458 aa8.3□□□□□ -1.08
ZNF540-210ENST00000592533 POLQO75417 2590 aa8.3□□□□□ -1.08
ZNF540-210ENST00000592533 TRAV4A0A0B4J268 109 aa8.3□□□□□ -1.08
ZNF540-210ENST00000592533 K7EQD1 137 aa8.3□□□□□ -1.08
ZNF540-210ENST00000592533 CIRBPQ14011 172 aaKnown RBP8.3□□□□□ -1.08
ZNF540-210ENST00000592533 DGAT2L7PQ6IED9 249 aa8.3□□□□□ -1.08
ZNF540-210ENST00000592533 Q6ZSV7 163 aa8.3□□□□□ -1.08
ZNF540-210ENST00000592533 STHQ8IWL8 128 aa8.3□□□□□ -1.08
ZNF540-210ENST00000592533 TEX15Q9BXT5 2789 aa8.3□□□□□ -1.08
ZNF540-210ENST00000592533 SMIM1B2RUZ4 78 aa8.3□□□□□ -1.08
ZNF540-210ENST00000592533 KHDC1LQ5JSQ8 128 aa8.3□□□□□ -1.08
ZNF540-210ENST00000592533 COPS9Q8WXC6 57 aa8.3□□□□□ -1.08
ZNF540-210ENST00000592533 UBE2WQ96B02 151 aa8.3□□□□□ -1.08
ZNF540-210ENST00000592533 RPL36AP83881 106 aaKnown RBP8.29□□□□□ -1.08
ZNF540-210ENST00000592533 LINC00308Q8TCZ7 52 aa8.29□□□□□ -1.08
ZNF540-210ENST00000592533 RPL36ALQ969Q0 106 aaKnown RBP8.29□□□□□ -1.08
ZNF540-210ENST00000592533 CITED2Q99967 270 aaPredicted RBP8.29□□□□□ -1.08
ZNF540-210ENST00000592533 LINC00694P0DN24 101 aa8.29□□□□□ -1.08
ZNF540-210ENST00000592533 NTM-AS1Q6ZSK4 140 aa8.29□□□□□ -1.08
ZNF540-210ENST00000592533 TEX49A0A1B0GTD5 131 aa8.29□□□□□ -1.08
ZNF540-210ENST00000592533 C2orf82Q6UX34 121 aa8.29□□□□□ -1.08
ZNF540-210ENST00000592533 TEX29Q8N6K0 151 aa8.29□□□□□ -1.08
ZNF540-210ENST00000592533 ZNF625Q96I27 306 aaPredicted RBP8.29□□□□□ -1.08
ZNF540-210ENST00000592533 TRGV1A0A0A0MS02 117 aa8.28□□□□□ -1.08
ZNF540-210ENST00000592533 F5H768 121 aa8.28□□□□□ -1.08
ZNF540-210ENST00000592533 Q96MF0 132 aa8.28□□□□□ -1.08
ZNF540-210ENST00000592533 MYO9AB2RTY4 2548 aa8.28□□□□□ -1.08
ZNF540-210ENST00000592533 Q9H8V8 135 aa8.28□□□□□ -1.08
ZNF540-210ENST00000592533 CDC42SE2Q9NRR3 84 aa8.28□□□□□ -1.08
ZNF540-210ENST00000592533 FAM240AA0A1B0GVK7 77 aa8.27□□□□□ -1.08
ZNF540-210ENST00000592533 Q6Q795 121 aa8.27□□□□□ -1.08
ZNF540-210ENST00000592533 NPC2P61916 151 aa8.27□□□□□ -1.09
ZNF540-210ENST00000592533 PTPN13Q12923 2485 aa8.27□□□□□ -1.09
ZNF540-210ENST00000592533 HERV-K104P63124 156 aa8.27□□□□□ -1.09
ZNF540-210ENST00000592533 MRPL23Q16540 153 aaKnown RBP8.27□□□□□ -1.09
ZNF540-210ENST00000592533 Q6ZTI0 123 aa8.27□□□□□ -1.09
ZNF540-210ENST00000592533 CLEC2BQ92478 149 aa8.27□□□□□ -1.09
ZNF540-210ENST00000592533 TRAV8-4A0A0B4J246 113 aa8.26□□□□□ -1.09
ZNF540-210ENST00000592533 CMC4P56277 68 aaPredicted RBP8.26□□□□□ -1.09
ZNF540-210ENST00000592533 SHISA2Q6UWI4 295 aa8.26□□□□□ -1.09
ZNF540-210ENST00000592533 DAND5Q8N907 189 aa8.26□□□□□ -1.09
ZNF540-210ENST00000592533 FAM110AQ9BQ89 295 aa8.26□□□□□ -1.09
ZNF540-210ENST00000592533 DNAJC9-AS1A6NH13 148 aa8.26□□□□□ -1.09
ZNF540-210ENST00000592533 CCL24O00175 119 aa8.26□□□□□ -1.09
ZNF540-210ENST00000592533 LRRK2Q5S007 2527 aa8.26□□□□□ -1.09
ZNF540-210ENST00000592533 CENPEQ02224 2701 aa8.26□□□□□ -1.09
ZNF540-210ENST00000592533 FAM208BQ5VWN6 2430 aa8.25□□□□□ -1.09
ZNF540-210ENST00000592533 PLAC8L1A1L4L8 177 aa8.25□□□□□ -1.09
ZNF540-210ENST00000592533 PRB1P04280 392 aa8.25□□□□□ -1.09
ZNF540-210ENST00000592533 GIG44P09565 113 aaPredicted RBP8.25□□□□□ -1.09
ZNF540-210ENST00000592533 SOSTDC1Q6X4U4 206 aa8.25□□□□□ -1.09
ZNF540-210ENST00000592533 NAV2Q8IVL1 2488 aa8.25□□□□□ -1.09
ZNF540-210ENST00000592533 USP24Q9UPU5 2620 aa8.24□□□□□ -1.09
ZNF540-210ENST00000592533 CHD6Q8TD26 2715 aa8.24□□□□□ -1.09
ZNF540-210ENST00000592533 ZNF462Q96JM2 2506 aa8.24□□□□□ -1.09
ZNF540-210ENST00000592533 COX7A2LO14548 114 aa8.24□□□□□ -1.09
ZNF540-210ENST00000592533 SNCGO76070 127 aa8.24□□□□□ -1.09
ZNF540-210ENST00000592533 BBC3Q96PG8 261 aaPredicted RBP8.24□□□□□ -1.09
ZNF540-210ENST00000592533 NDUFA7O95182 113 aa8.24□□□□□ -1.09
ZNF540-210ENST00000592533 C16orf74Q96GX8 76 aa8.24□□□□□ -1.09
ZNF540-210ENST00000592533 ZNF843Q8N446 348 aa8.23□□□□□ -1.09
ZNF540-210ENST00000592533 HIST2H2BDQ6DRA6 164 aa8.23□□□□□ -1.09
ZNF540-210ENST00000592533 OVOL2Q9BRP0 275 aa8.23□□□□□ -1.09
ZNF540-210ENST00000592533 TMEM243Q9BU79 118 aa8.23□□□□□ -1.09
ZNF540-210ENST00000592533 TRAV13-1A0A0B4J241 112 aa8.23□□□□□ -1.09
ZNF540-210ENST00000592533 TRBV6-4A0A1B0GX49 114 aa8.23□□□□□ -1.09
ZNF540-210ENST00000592533 TRAV26-1A0A087WT03 109 aa8.22□□□□□ -1.09
ZNF540-210ENST00000592533 CRLF1O75462 422 aa8.22□□□□□ -1.09
ZNF540-210ENST00000592533 PRIMA1Q86XR5 153 aa8.22□□□□□ -1.09
ZNF540-210ENST00000592533 ZNF469Q96JG9 3925 aaPredicted RBP8.22□□□□□ -1.09
ZNF540-210ENST00000592533 GAGE12JA6NER3 117 aa8.22□□□□□ -1.09
ZNF540-210ENST00000592533 GAGE2BQ13066 116 aa8.22□□□□□ -1.09
ZNF540-210ENST00000592533 GAGE4Q13068 117 aa8.22□□□□□ -1.09
ZNF540-210ENST00000592533 GAGE5Q13069 117 aa8.22□□□□□ -1.09
ZNF540-210ENST00000592533 GAGE2EQ4V326 116 aa8.22□□□□□ -1.09
ZNF540-210ENST00000592533 NOP10Q9NPE3 64 aaKnown RBP8.22□□□□□ -1.09
ZNF540-210ENST00000592533 ESM1Q9NQ30 184 aa8.22□□□□□ -1.09
ZNF540-210ENST00000592533 GAGE2DQ9UEU5 116 aa8.22□□□□□ -1.09
ZNF540-210ENST00000592533 C16orf95Q9H693 158 aa8.21□□□□□ -1.09
ZNF540-210ENST00000592533 ABCA12Q86UK0 2595 aa8.21□□□□□ -1.09
ZNF540-210ENST00000592533 TRACP01848 142 aa8.21□□□□□ -1.1
ZNF540-210ENST00000592533 CSNK1G2-AS1Q8NCQ2 148 aa8.21□□□□□ -1.1
ZNF540-210ENST00000592533 ANAPC13Q9BS18 74 aa8.21□□□□□ -1.1
ZNF540-210ENST00000592533 C19orf73Q9NVV2 129 aa8.21□□□□□ -1.1
ZNF540-210ENST00000592533 PF4P02776 101 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms