RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 GAGE12FP0CL80 117 aa11.21□□□□□ -0.62
MBD1-227ENST00000592060 GAGE12GP0CL81 117 aa11.21□□□□□ -0.62
MBD1-227ENST00000592060 GAGE12IP0CL82 117 aa11.21□□□□□ -0.62
MBD1-227ENST00000592060 SBSPONQ8IVN8 264 aa11.21□□□□□ -0.62
MBD1-227ENST00000592060 C10orf126Q8N4M7 172 aa11.2□□□□□ -0.62
MBD1-227ENST00000592060 IGHV1-58A0A0C4DH39 117 aa11.19□□□□□ -0.62
MBD1-227ENST00000592060 GAGE12JA6NER3 117 aa11.19□□□□□ -0.62
MBD1-227ENST00000592060 CIDEAO60543 219 aa11.19□□□□□ -0.62
MBD1-227ENST00000592060 LINC00694P0DN24 101 aa11.19□□□□□ -0.62
MBD1-227ENST00000592060 HIVEP1P15822 2718 aa11.19□□□□□ -0.62
MBD1-227ENST00000592060 GAGE4Q13068 117 aa11.19□□□□□ -0.62
MBD1-227ENST00000592060 GAGE5Q13069 117 aa11.19□□□□□ -0.62
MBD1-227ENST00000592060 GAGE13Q4V321 117 aa11.19□□□□□ -0.62
MBD1-227ENST00000592060 JMJD1CQ15652 2540 aa11.19□□□□□ -0.62
MBD1-227ENST00000592060 TRGV2A0A075B6R0 118 aa11.19□□□□□ -0.62
MBD1-227ENST00000592060 IGLV5-45A0A087WSX0 123 aa11.19□□□□□ -0.62
MBD1-227ENST00000592060 TRAV8-3A0A0A6YYJ7 113 aa11.19□□□□□ -0.62
MBD1-227ENST00000592060 SPATA3Q8NHX4 192 aa11.19□□□□□ -0.62
MBD1-227ENST00000592060 OCIAD2Q56VL3 154 aa11.18□□□□□ -0.62
MBD1-227ENST00000592060 NIPBLQ6KC79 2804 aaeCLIP11.18□□□□□ -0.62
MBD1-227ENST00000592060 A0A0J9YXY3 114 aa11.17□□□□□ -0.62
MBD1-227ENST00000592060 TRBV6-4A0A1B0GX49 114 aa11.17□□□□□ -0.62
MBD1-227ENST00000592060 TIRAPP58753 221 aa11.17□□□□□ -0.62
MBD1-227ENST00000592060 RBX1P62877 108 aa11.17□□□□□ -0.62
MBD1-227ENST00000592060 VSIG2Q96IQ7 327 aa11.17□□□□□ -0.62
MBD1-227ENST00000592060 PGPEP1Q9NXJ5 209 aa11.17□□□□□ -0.62
MBD1-227ENST00000592060 CSDC2Q9Y534 153 aaKnown RBP11.17□□□□□ -0.62
MBD1-227ENST00000592060 LOC100131303A0A0U1RQF7 123 aa11.16□□□□□ -0.62
MBD1-227ENST00000592060 SPINK8P0C7L1 97 aa11.16□□□□□ -0.62
MBD1-227ENST00000592060 INSL3P51460 131 aa11.16□□□□□ -0.62
MBD1-227ENST00000592060 DGAT2L7PQ6IED9 249 aa11.16□□□□□ -0.62
MBD1-227ENST00000592060 FAM19A3Q7Z5A8 133 aa11.16□□□□□ -0.62
MBD1-227ENST00000592060 GTSF1LQ9H1H1 148 aa11.16□□□□□ -0.62
MBD1-227ENST00000592060 GEMIN7Q9H840 131 aaKnown RBP11.16□□□□□ -0.62
MBD1-227ENST00000592060 TMEM238C9JI98 176 aa11.15□□□□□ -0.62
MBD1-227ENST00000592060 APOMO95445 188 aa11.15□□□□□ -0.62
MBD1-227ENST00000592060 TSPAN13O95857 204 aa11.15□□□□□ -0.62
MBD1-227ENST00000592060 CFC1BP0CG36 223 aa11.15□□□□□ -0.62
MBD1-227ENST00000592060 CFC1P0CG37 223 aa11.15□□□□□ -0.62
MBD1-227ENST00000592060 FHL2Q14192 279 aa11.15□□□□□ -0.62
MBD1-227ENST00000592060 C9orf66Q5T8R8 295 aa11.15□□□□□ -0.62
MBD1-227ENST00000592060 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.15□□□□□ -0.62
MBD1-227ENST00000592060 LITAFQ99732 161 aa11.15□□□□□ -0.62
MBD1-227ENST00000592060 NOTCH3Q9UM47 2321 aa11.15□□□□□ -0.62
MBD1-227ENST00000592060 CRLF1O75462 422 aa11.14□□□□□ -0.63
MBD1-227ENST00000592060 LINC00612Q8N6U2 182 aa11.14□□□□□ -0.63
MBD1-227ENST00000592060 CDKN2A-AS1Q9UH64 79 aa11.14□□□□□ -0.63
MBD1-227ENST00000592060 TRGV4A0A0C4DH28 118 aa11.14□□□□□ -0.63
MBD1-227ENST00000592060 COX6A2Q02221 97 aa11.14□□□□□ -0.63
MBD1-227ENST00000592060 NDUFA12Q9UI09 145 aa11.14□□□□□ -0.63
MBD1-227ENST00000592060 A8MZ25 164 aa11.13□□□□□ -0.63
MBD1-227ENST00000592060 LINC00242Q5T6M2 205 aa11.13□□□□□ -0.63
MBD1-227ENST00000592060 ZFAND6Q6FIF0 208 aa11.13□□□□□ -0.63
MBD1-227ENST00000592060 KIR2DL5BQ8NHK3 375 aa11.13□□□□□ -0.63
MBD1-227ENST00000592060 TMEM243Q9BU79 118 aa11.13□□□□□ -0.63
MBD1-227ENST00000592060 EIF4EBP3O60516 100 aaPredicted RBP11.12□□□□□ -0.63
MBD1-227ENST00000592060 FOSL1P15407 271 aa11.12□□□□□ -0.63
MBD1-227ENST00000592060 CDC42SE2Q9NRR3 84 aa11.12□□□□□ -0.63
MBD1-227ENST00000592060 X6R8D5 127 aa11.12□□□□□ -0.63
MBD1-227ENST00000592060 FN1P02751 2386 aaKnown RBP11.12□□□□□ -0.63
MBD1-227ENST00000592060 A4D1N5 150 aa11.12□□□□□ -0.63
MBD1-227ENST00000592060 HERVK_113P63121 156 aa11.12□□□□□ -0.63
MBD1-227ENST00000592060 SMAGPQ0VAQ4 97 aa11.12□□□□□ -0.63
MBD1-227ENST00000592060 MUSTN1Q8IVN3 82 aa11.12□□□□□ -0.63
MBD1-227ENST00000592060 CITED1Q99966 193 aa11.12□□□□□ -0.63
MBD1-227ENST00000592060 NSD1Q96L73 2696 aaPredicted RBP11.11□□□□□ -0.63
MBD1-227ENST00000592060 IGLV5-39A0A0G2JS06 123 aa11.1□□□□□ -0.63
MBD1-227ENST00000592060 TMEM101Q96IK0 257 aa11.1□□□□□ -0.63
MBD1-227ENST00000592060 SPANXDQ9BXN6 97 aa11.1□□□□□ -0.63
MBD1-227ENST00000592060 SPANXCQ9NY87 97 aa11.1□□□□□ -0.63
MBD1-227ENST00000592060 H3BMG7 143 aa11.1□□□□□ -0.63
MBD1-227ENST00000592060 H7C423 109 aa11.1□□□□□ -0.63
MBD1-227ENST00000592060 RPL24P83731 157 aaKnown RBP11.1□□□□□ -0.63
MBD1-227ENST00000592060 A0A0B4J2C4 111 aa11.09□□□□□ -0.63
MBD1-227ENST00000592060 PRO1854Q9UHT4 67 aa11.09□□□□□ -0.63
MBD1-227ENST00000592060 SMIM9A6NGZ8 99 aa11.08□□□□□ -0.64
MBD1-227ENST00000592060 K7ERU9 68 aa11.08□□□□□ -0.64
MBD1-227ENST00000592060 UBE2L6O14933 153 aa11.08□□□□□ -0.64
MBD1-227ENST00000592060 NDUFA1O15239 70 aa11.08□□□□□ -0.64
MBD1-227ENST00000592060 KRTAP21-3Q3LHN1 58 aa11.08□□□□□ -0.64
MBD1-227ENST00000592060 ADAMTSL4-AS1Q5T5F5 129 aa11.08□□□□□ -0.64
MBD1-227ENST00000592060 PRO0461Q9UI25 63 aa11.08□□□□□ -0.64
MBD1-227ENST00000592060 F8W1H4 67 aa11.08□□□□□ -0.64
MBD1-227ENST00000592060 TRAV13-1A0A0B4J241 112 aa11.07□□□□□ -0.64
MBD1-227ENST00000592060 SMIM1B2RUZ4 78 aa11.07□□□□□ -0.64
MBD1-227ENST00000592060 TIMM17BO60830 172 aa11.07□□□□□ -0.64
MBD1-227ENST00000592060 CBY1Q9Y3M2 126 aa11.07□□□□□ -0.64
MBD1-227ENST00000592060 DNHD1Q96M86 4753 aa11.07□□□□□ -0.64
MBD1-227ENST00000592060 F5H768 121 aa11.07□□□□□ -0.64
MBD1-227ENST00000592060 DEFB130BP0DP73 79 aa11.07□□□□□ -0.64
MBD1-227ENST00000592060 DEFB130AP0DP74 79 aa11.07□□□□□ -0.64
MBD1-227ENST00000592060 MIAQ16674 131 aa11.07□□□□□ -0.64
MBD1-227ENST00000592060 RNF151Q2KHN1 245 aa11.07□□□□□ -0.64
MBD1-227ENST00000592060 TRBV6-8A0A0A6YYG3 113 aa11.06□□□□□ -0.64
MBD1-227ENST00000592060 IGHV3-33P01772 117 aa11.06□□□□□ -0.64
MBD1-227ENST00000592060 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.05□□□□□ -0.64
MBD1-227ENST00000592060 WFDC2Q14508 124 aa11.05□□□□□ -0.64
MBD1-227ENST00000592060 SFTA2Q6UW10 78 aa11.05□□□□□ -0.64
MBD1-227ENST00000592060 LOC107984156A0A0G2JMH3 177 aa11.05□□□□□ -0.64
MBD1-227ENST00000592060 LYRM7Q5U5X0 104 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms