RNA–Protein interactions for RNA: ENST00000591598.5

CTDP1-207, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best)

Gene CTDP1, Length 3,228 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-207ENST00000591598 PLA2G2AP14555 144 aa12.1□□□□□ -0.47
CTDP1-207ENST00000591598 GAGE12JA6NER3 117 aa12.09□□□□□ -0.47
CTDP1-207ENST00000591598 GAGE4Q13068 117 aa12.09□□□□□ -0.47
CTDP1-207ENST00000591598 GAGE5Q13069 117 aa12.09□□□□□ -0.47
CTDP1-207ENST00000591598 CDKN2A-AS1Q9UH64 79 aa12.09□□□□□ -0.47
CTDP1-207ENST00000591598 CLUHP3Q96NS8 147 aa12.09□□□□□ -0.47
CTDP1-207ENST00000591598 EIF4EBP3O60516 100 aaPredicted RBP12.09□□□□□ -0.47
CTDP1-207ENST00000591598 ADAMTSL4-AS1Q5T5F5 129 aa12.09□□□□□ -0.47
CTDP1-207ENST00000591598 ERG28Q9UKR5 140 aa12.09□□□□□ -0.47
CTDP1-207ENST00000591598 MRPS36P82909 103 aaKnown RBP12.08□□□□□ -0.48
CTDP1-207ENST00000591598 PYGO1Q9Y3Y4 419 aa12.08□□□□□ -0.48
CTDP1-207ENST00000591598 IGKV3OR2-268A0A0C4DH90 116 aa12.08□□□□□ -0.48
CTDP1-207ENST00000591598 LINC00694P0DN24 101 aa12.08□□□□□ -0.48
CTDP1-207ENST00000591598 UBE2D3P61077 147 aa12.07□□□□□ -0.48
CTDP1-207ENST00000591598 UBE2D2P62837 147 aa12.07□□□□□ -0.48
CTDP1-207ENST00000591598 IGHV1-58A0A0C4DH39 117 aa12.07□□□□□ -0.48
CTDP1-207ENST00000591598 A8MTW9 85 aa12.07□□□□□ -0.48
CTDP1-207ENST00000591598 GAGE7O76087 117 aa12.06□□□□□ -0.48
CTDP1-207ENST00000591598 GAGE12FP0CL80 117 aa12.06□□□□□ -0.48
CTDP1-207ENST00000591598 GAGE12GP0CL81 117 aa12.06□□□□□ -0.48
CTDP1-207ENST00000591598 GAGE12IP0CL82 117 aa12.06□□□□□ -0.48
CTDP1-207ENST00000591598 LYRM7Q5U5X0 104 aa12.06□□□□□ -0.48
CTDP1-207ENST00000591598 TRGV2A0A075B6R0 118 aa12.06□□□□□ -0.48
CTDP1-207ENST00000591598 SPANXA1Q9NS26 97 aa12.06□□□□□ -0.48
CTDP1-207ENST00000591598 C9JAW5 83 aa12.05□□□□□ -0.48
CTDP1-207ENST00000591598 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.05□□□□□ -0.48
CTDP1-207ENST00000591598 LINC01006Q8NI28 216 aa12.05□□□□□ -0.48
CTDP1-207ENST00000591598 RS1O15537 224 aa12.05□□□□□ -0.48
CTDP1-207ENST00000591598 COX6A2Q02221 97 aa12.05□□□□□ -0.48
CTDP1-207ENST00000591598 VSIG2Q96IQ7 327 aa12.05□□□□□ -0.48
CTDP1-207ENST00000591598 IGHV3-33P01772 117 aa12.05□□□□□ -0.48
CTDP1-207ENST00000591598 PDZD2O15018 2839 aa12.04□□□□□ -0.48
CTDP1-207ENST00000591598 FOXI1Q12951 378 aa12.04□□□□□ -0.48
CTDP1-207ENST00000591598 LOC100131303A0A0U1RQF7 123 aa12.03□□□□□ -0.48
CTDP1-207ENST00000591598 RPL36AP83881 106 aaKnown RBP12.03□□□□□ -0.48
CTDP1-207ENST00000591598 TMEM263Q8WUH6 116 aaKnown RBP12.03□□□□□ -0.48
CTDP1-207ENST00000591598 RPL36ALQ969Q0 106 aaKnown RBP12.03□□□□□ -0.48
CTDP1-207ENST00000591598 SMR3AQ99954 134 aa12.03□□□□□ -0.48
CTDP1-207ENST00000591598 BEAN1Q3B7T3 259 aa12.03□□□□□ -0.48
CTDP1-207ENST00000591598 C1QTNF4Q9BXJ3 329 aa12.03□□□□□ -0.48
CTDP1-207ENST00000591598 TINCRA0A1B0GVN0 87 aa12.03□□□□□ -0.48
CTDP1-207ENST00000591598 VWFP04275 2813 aa12.02□□□□□ -0.48
CTDP1-207ENST00000591598 TMEM86BQ8N661 226 aa12.01□□□□□ -0.49
CTDP1-207ENST00000591598 EDA2RQ9HAV5 297 aa12.01□□□□□ -0.49
CTDP1-207ENST00000591598 K7EQD1 137 aa12□□□□□ -0.49
CTDP1-207ENST00000591598 FHL3Q13643 280 aa12□□□□□ -0.49
CTDP1-207ENST00000591598 DNAJC30Q96LL9 226 aa12□□□□□ -0.49
CTDP1-207ENST00000591598 TRBV20-1A0A075B6N2 111 aa12□□□□□ -0.49
CTDP1-207ENST00000591598 LITAFQ99732 161 aa12□□□□□ -0.49
CTDP1-207ENST00000591598 Q9H8V8 135 aa12□□□□□ -0.49
CTDP1-207ENST00000591598 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.99□□□□□ -0.49
CTDP1-207ENST00000591598 NTM-AS1Q6ZSK4 140 aa11.99□□□□□ -0.49
CTDP1-207ENST00000591598 ANKRD29Q8N6D5 301 aa11.99□□□□□ -0.49
CTDP1-207ENST00000591598 TMEM101Q96IK0 257 aa11.99□□□□□ -0.49
CTDP1-207ENST00000591598 SLC25A20O43772 301 aa11.99□□□□□ -0.49
CTDP1-207ENST00000591598 CKS1BP61024 79 aa11.99□□□□□ -0.49
CTDP1-207ENST00000591598 UBE2L6O14933 153 aa11.98□□□□□ -0.49
CTDP1-207ENST00000591598 TRAV25A0A0B4J276 109 aa11.98□□□□□ -0.49
CTDP1-207ENST00000591598 TRIAP1O43715 76 aa11.98□□□□□ -0.49
CTDP1-207ENST00000591598 PIK3CD-AS1Q5SR53 167 aa11.98□□□□□ -0.49
CTDP1-207ENST00000591598 A0A0B4J2C4 111 aa11.97□□□□□ -0.49
CTDP1-207ENST00000591598 TRGV4A0A0C4DH28 118 aa11.97□□□□□ -0.49
CTDP1-207ENST00000591598 MT-ATP8P03928 68 aa11.97□□□□□ -0.49
CTDP1-207ENST00000591598 LINC00242Q5T6M2 205 aa11.97□□□□□ -0.49
CTDP1-207ENST00000591598 TEN1Q86WV5 123 aa11.97□□□□□ -0.49
CTDP1-207ENST00000591598 CARD19Q96LW7 228 aa11.97□□□□□ -0.49
CTDP1-207ENST00000591598 ATRQ13535 2644 aa11.97□□□□□ -0.49
CTDP1-207ENST00000591598 CIDEAO60543 219 aa11.97□□□□□ -0.49
CTDP1-207ENST00000591598 DEFB130BP0DP73 79 aa11.97□□□□□ -0.49
CTDP1-207ENST00000591598 DEFB130AP0DP74 79 aa11.97□□□□□ -0.49
CTDP1-207ENST00000591598 GIG44P09565 113 aaPredicted RBP11.96□□□□□ -0.49
CTDP1-207ENST00000591598 MEIG1Q5JSS6 88 aa11.96□□□□□ -0.49
CTDP1-207ENST00000591598 TRAV26-1A0A087WT03 109 aa11.96□□□□□ -0.49
CTDP1-207ENST00000591598 CRYBA4P53673 196 aa11.96□□□□□ -0.49
CTDP1-207ENST00000591598 MIAQ16674 131 aa11.96□□□□□ -0.5
CTDP1-207ENST00000591598 CLEC2BQ92478 149 aa11.96□□□□□ -0.5
CTDP1-207ENST00000591598 GAGE6Q13070 117 aa11.95□□□□□ -0.5
CTDP1-207ENST00000591598 ZFAND6Q6FIF0 208 aa11.95□□□□□ -0.5
CTDP1-207ENST00000591598 TOMM7Q9P0U1 55 aa11.95□□□□□ -0.5
CTDP1-207ENST00000591598 KRTAP1-1Q07627 177 aa11.94□□□□□ -0.5
CTDP1-207ENST00000591598 PRIMA1Q86XR5 153 aa11.94□□□□□ -0.5
CTDP1-207ENST00000591598 TEX29Q8N6K0 151 aa11.94□□□□□ -0.5
CTDP1-207ENST00000591598 PPDPFLQ8WWR9 84 aa11.94□□□□□ -0.5
CTDP1-207ENST00000591598 TRAV4A0A0B4J268 109 aa11.94□□□□□ -0.5
CTDP1-207ENST00000591598 RPL13AP40429 203 aaKnown RBP11.94□□□□□ -0.5
CTDP1-207ENST00000591598 NTN5Q8WTR8 489 aaPredicted RBP11.93□□□□□ -0.5
CTDP1-207ENST00000591598 HERVK_113P63121 156 aa11.93□□□□□ -0.5
CTDP1-207ENST00000591598 ICOSQ9Y6W8 199 aa11.93□□□□□ -0.5
CTDP1-207ENST00000591598 CIRBPQ14011 172 aaKnown RBP11.92□□□□□ -0.5
CTDP1-207ENST00000591598 SPATA25Q9BR10 227 aa11.92□□□□□ -0.5
CTDP1-207ENST00000591598 DAZ2Q13117 558 aaKnown RBP11.92□□□□□ -0.5
CTDP1-207ENST00000591598 ATXN8Q156A1 80 aa11.92□□□□□ -0.5
CTDP1-207ENST00000591598 DAZ4Q86SG3 579 aaKnown RBP11.92□□□□□ -0.5
CTDP1-207ENST00000591598 DAZ3Q9NR90 486 aaKnown RBP11.92□□□□□ -0.5
CTDP1-207ENST00000591598 TMEM243Q9BU79 118 aa11.92□□□□□ -0.5
CTDP1-207ENST00000591598 PF4P02776 101 aa11.91□□□□□ -0.5
CTDP1-207ENST00000591598 LINC01620Q4KN68 170 aa11.91□□□□□ -0.5
CTDP1-207ENST00000591598 CHCHD5Q9BSY4 110 aa11.91□□□□□ -0.5
CTDP1-207ENST00000591598 OTOGQ6ZRI0 2925 aa11.91□□□□□ -0.5
CTDP1-207ENST00000591598 A0A096LPF7 62 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms