RNA–Protein interactions for RNA: ENST00000587476.1

TUBD1-207, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 825 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-207ENST00000587476 SSBP3-AS1Q7Z2R9 100 aa0.78□□□□□ -2.28
TUBD1-207ENST00000587476 FAM167A-AS1Q96KT0 104 aa0.78□□□□□ -2.28
TUBD1-207ENST00000587476 LINC01558Q9Y6Z2 57 aa0.78□□□□□ -2.28
TUBD1-207ENST00000587476 ARHGAP5Q13017 1502 aa0.78□□□□□ -2.28
TUBD1-207ENST00000587476 CACNA1EQ15878 2313 aa0.77□□□□□ -2.29
TUBD1-207ENST00000587476 CACNA1HO95180 2353 aa0.77□□□□□ -2.29
TUBD1-207ENST00000587476 S100A8P05109 93 aa0.77□□□□□ -2.29
TUBD1-207ENST00000587476 ZFYVE16Q7Z3T8 1539 aa0.77□□□□□ -2.29
TUBD1-207ENST00000587476 CNTLNQ9NXG0 1405 aa0.76□□□□□ -2.29
TUBD1-207ENST00000587476 TMEM218A2RU14 115 aa0.76□□□□□ -2.29
TUBD1-207ENST00000587476 KRTAP2-3P0C7H8 128 aa0.76□□□□□ -2.29
TUBD1-207ENST00000587476 KRTAP5-10Q6L8G5 202 aa0.76□□□□□ -2.29
TUBD1-207ENST00000587476 KRTAP2-4Q9BYR9 128 aa0.76□□□□□ -2.29
TUBD1-207ENST00000587476 KRTAP2-1Q9BYU5 128 aa0.76□□□□□ -2.29
TUBD1-207ENST00000587476 CDC42SE2Q9NRR3 84 aa0.76□□□□□ -2.29
TUBD1-207ENST00000587476 FRAS1Q86XX4 4008 aa0.76□□□□□ -2.29
TUBD1-207ENST00000587476 ASXL3Q9C0F0 2248 aa0.76□□□□□ -2.29
TUBD1-207ENST00000587476 MRC2Q9UBG0 1479 aa0.75□□□□□ -2.29
TUBD1-207ENST00000587476 A0A0D9SFI3 127 aa0.75□□□□□ -2.29
TUBD1-207ENST00000587476 SFT2D2O95562 160 aa0.75□□□□□ -2.29
TUBD1-207ENST00000587476 SNCAP37840 140 aa0.75□□□□□ -2.29
TUBD1-207ENST00000587476 NCMAPQ5T1S8 102 aa0.75□□□□□ -2.29
TUBD1-207ENST00000587476 FAM213BQ8TBF2 198 aa0.75□□□□□ -2.29
TUBD1-207ENST00000587476 MANBALQ9NQG1 85 aa0.75□□□□□ -2.29
TUBD1-207ENST00000587476 ABCA3Q99758 1704 aa0.75□□□□□ -2.29
TUBD1-207ENST00000587476 CC2D2AQ9P2K1 1620 aa0.75□□□□□ -2.29
TUBD1-207ENST00000587476 TRAV30A0A087WSZ9 112 aa0.74□□□□□ -2.29
TUBD1-207ENST00000587476 M0R143 59 aa0.74□□□□□ -2.29
TUBD1-207ENST00000587476 S100A3P33764 101 aa0.74□□□□□ -2.29
TUBD1-207ENST00000587476 GNG2P59768 71 aa0.74□□□□□ -2.29
TUBD1-207ENST00000587476 KRTDAPP60985 99 aa0.74□□□□□ -2.29
TUBD1-207ENST00000587476 PKIAP61925 76 aa0.74□□□□□ -2.29
TUBD1-207ENST00000587476 HAMPP81172 84 aa0.74□□□□□ -2.29
TUBD1-207ENST00000587476 Q0VG73 95 aa0.74□□□□□ -2.29
TUBD1-207ENST00000587476 ACBD7Q8N6N7 88 aa0.74□□□□□ -2.29
TUBD1-207ENST00000587476 KDM5AP29375 1690 aaKnown RBP0.74□□□□□ -2.29
TUBD1-207ENST00000587476 TRAV22A0A0B4J277 110 aa0.73□□□□□ -2.29
TUBD1-207ENST00000587476 S100A10P60903 97 aa0.73□□□□□ -2.29
TUBD1-207ENST00000587476 NXT2Q9NPJ8 142 aaKnown RBP0.73□□□□□ -2.29
TUBD1-207ENST00000587476 MUC16Q8WXI7 14507 aa0.73□□□□□ -2.29
TUBD1-207ENST00000587476 CACNA1CQ13936 2221 aa0.73□□□□□ -2.29
TUBD1-207ENST00000587476 BTAF1O14981 1849 aa0.73□□□□□ -2.29
TUBD1-207ENST00000587476 VPS8Q8N3P4 1428 aa0.72□□□□□ -2.29
TUBD1-207ENST00000587476 RAPGEF6Q8TEU7 1601 aa0.72□□□□□ -2.29
TUBD1-207ENST00000587476 PVALEFA0A1B0GWK0 134 aa0.72□□□□□ -2.29
TUBD1-207ENST00000587476 MPC2O95563 127 aa0.72□□□□□ -2.29
TUBD1-207ENST00000587476 COX6CP09669 75 aa0.72□□□□□ -2.29
TUBD1-207ENST00000587476 COL5A1-AS1Q5SY13 56 aa0.72□□□□□ -2.29
TUBD1-207ENST00000587476 SNHG12Q9BXW3 62 aa0.72□□□□□ -2.29
TUBD1-207ENST00000587476 LINC00472Q9H8W2 130 aa0.72□□□□□ -2.29
TUBD1-207ENST00000587476 FAIMQ9NVQ4 179 aa0.72□□□□□ -2.29
TUBD1-207ENST00000587476 PRO1854Q9UHT4 67 aa0.72□□□□□ -2.29
TUBD1-207ENST00000587476 MEGF8Q7Z7M0 2845 aa0.72□□□□□ -2.29
TUBD1-207ENST00000587476 ARHGEF5Q12774 1597 aa0.71□□□□□ -2.3
TUBD1-207ENST00000587476 TTC28Q96AY4 2481 aa0.71□□□□□ -2.3
TUBD1-207ENST00000587476 MGPP08493 103 aa0.71□□□□□ -2.3
TUBD1-207ENST00000587476 UBE2D3P61077 147 aa0.71□□□□□ -2.3
TUBD1-207ENST00000587476 UBE2D2P62837 147 aa0.71□□□□□ -2.3
TUBD1-207ENST00000587476 CNFNQ9BYD5 112 aa0.71□□□□□ -2.3
TUBD1-207ENST00000587476 CHD1O14646 1710 aa0.71□□□□□ -2.3
TUBD1-207ENST00000587476 ABCC10Q5T3U5 1492 aa0.71□□□□□ -2.3
TUBD1-207ENST00000587476 TOPAZ1Q8N9V7 1692 aa0.7□□□□□ -2.3
TUBD1-207ENST00000587476 SHANK2Q9UPX8 1470 aa0.7□□□□□ -2.3
TUBD1-207ENST00000587476 CRYM-AS1A6NIL9 109 aa0.7□□□□□ -2.3
TUBD1-207ENST00000587476 TRAPPC2P0DI81 140 aa0.7□□□□□ -2.3
TUBD1-207ENST00000587476 TRAPPC2BP0DI82 140 aa0.7□□□□□ -2.3
TUBD1-207ENST00000587476 Q9H521 79 aa0.7□□□□□ -2.3
TUBD1-207ENST00000587476 ARL2-SNX15V9GYD0 113 aa0.7□□□□□ -2.3
TUBD1-207ENST00000587476 LRP6O75581 1613 aa0.7□□□□□ -2.3
TUBD1-207ENST00000587476 TENM3Q9P273 2699 aa0.7□□□□□ -2.3
TUBD1-207ENST00000587476 UBA52P62987 128 aaKnown RBP0.69□□□□□ -2.3
TUBD1-207ENST00000587476 Q6JHZ5 121 aa0.69□□□□□ -2.3
TUBD1-207ENST00000587476 C9orf62Q8N4C0 152 aa0.69□□□□□ -2.3
TUBD1-207ENST00000587476 HMGXB3Q12766 1538 aa0.69□□□□□ -2.3
TUBD1-207ENST00000587476 AHCTF1Q8WYP5 2266 aa0.68□□□□□ -2.3
TUBD1-207ENST00000587476 MT-ATP8P03928 68 aa0.68□□□□□ -2.3
TUBD1-207ENST00000587476 LINC00032P0C843 101 aa0.68□□□□□ -2.3
TUBD1-207ENST00000587476 IGLC1P0CG04 106 aa0.68□□□□□ -2.3
TUBD1-207ENST00000587476 ERCC6L2Q5T890 1561 aa0.68□□□□□ -2.3
TUBD1-207ENST00000587476 VAMP8Q9BV40 100 aa0.68□□□□□ -2.3
TUBD1-207ENST00000587476 DPY30Q9C005 99 aa0.68□□□□□ -2.3
TUBD1-207ENST00000587476 AP4S1Q9Y587 144 aa0.68□□□□□ -2.3
TUBD1-207ENST00000587476 SPCS1Q9Y6A9 102 aa0.68□□□□□ -2.3
TUBD1-207ENST00000587476 V9GYS6 101 aa0.68□□□□□ -2.3
TUBD1-207ENST00000587476 EHBP1L1Q8N3D4 1523 aa0.68□□□□□ -2.3
TUBD1-207ENST00000587476 APCP25054 2843 aa0.67□□□□□ -2.3
TUBD1-207ENST00000587476 DIP2CQ9Y2E4 1556 aa0.67□□□□□ -2.3
TUBD1-207ENST00000587476 hADV29S1A0JD25 119 aa0.67□□□□□ -2.3
TUBD1-207ENST00000587476 GNGT2O14610 69 aa0.67□□□□□ -2.3
TUBD1-207ENST00000587476 FAM223AQ8IWN6 122 aa0.67□□□□□ -2.3
TUBD1-207ENST00000587476 PRO1933Q9H354 126 aa0.67□□□□□ -2.3
TUBD1-207ENST00000587476 TOP2BQ02880 1626 aa0.67□□□□□ -2.3
TUBD1-207ENST00000587476 RAPGEF2Q9Y4G8 1499 aa0.67□□□□□ -2.3
TUBD1-207ENST00000587476 NSD3Q9BZ95 1437 aa0.66□□□□□ -2.3
TUBD1-207ENST00000587476 SEC11AP67812 179 aa0.66□□□□□ -2.3
TUBD1-207ENST00000587476 KRTAP21-1Q3LI58 79 aa0.66□□□□□ -2.3
TUBD1-207ENST00000587476 SFTA2Q6UW10 78 aa0.66□□□□□ -2.3
TUBD1-207ENST00000587476 FAM208BQ5VWN6 2430 aa0.66□□□□□ -2.3
TUBD1-207ENST00000587476 MYO7BQ6PIF6 2116 aa0.65□□□□□ -2.3
TUBD1-207ENST00000587476 ABCC5O15440 1437 aa0.65□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms