RNA–Protein interactions for RNA: ENST00000587476.1

TUBD1-207, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 825 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-207ENST00000587476 AEBP2Q6ZN18 517 aaPredicted RBP18.85■□□□□ 0.61
TUBD1-207ENST00000587476 CHIC1Q5VXU3 224 aa18.14■□□□□ 0.49
TUBD1-207ENST00000587476 SENP3Q9H4L4 574 aaPredicted RBP16.01■□□□□ 0.15
TUBD1-207ENST00000587476 PHF23Q9BUL5 403 aaPredicted RBP15.93■□□□□ 0.14
TUBD1-207ENST00000587476 PLPPR3Q6T4P5 718 aa14.95□□□□□ -0.02
TUBD1-207ENST00000587476 FOXD1Q16676 465 aa14.9□□□□□ -0.02
TUBD1-207ENST00000587476 PPP6R1Q9UPN7 881 aa14.15□□□□□ -0.14
TUBD1-207ENST00000587476 ADRA2BP18089 450 aa14.13□□□□□ -0.15
TUBD1-207ENST00000587476 PIAS4Q8N2W9 510 aaPredicted RBP14.01□□□□□ -0.17
TUBD1-207ENST00000587476 MSH5O43196 834 aa13.82□□□□□ -0.2
TUBD1-207ENST00000587476 KCNA4P22459 653 aa13.57□□□□□ -0.24
TUBD1-207ENST00000587476 EHMT2Q96KQ7 1210 aa13.38□□□□□ -0.27
TUBD1-207ENST00000587476 PPP4R3CPQ6ZMV5 832 aa13.23□□□□□ -0.29
TUBD1-207ENST00000587476 NCBP3Q53F19 620 aaKnown RBP13.1□□□□□ -0.31
TUBD1-207ENST00000587476 SLC4A1APQ9BWU0 796 aaKnown RBP13.08□□□□□ -0.32
TUBD1-207ENST00000587476 POTEDQ86YR6 584 aa13.04□□□□□ -0.32
TUBD1-207ENST00000587476 CSRNP3Q8WYN3 585 aa12.92□□□□□ -0.34
TUBD1-207ENST00000587476 MAPK8IP2Q13387 824 aaPredicted RBP12.89□□□□□ -0.35
TUBD1-207ENST00000587476 SCAF1Q9H7N4 1312 aaKnown RBP12.88□□□□□ -0.35
TUBD1-207ENST00000587476 NPM3O75607 178 aaKnown RBP12.85□□□□□ -0.35
TUBD1-207ENST00000587476 DMRT2Q9Y5R5 561 aa12.75□□□□□ -0.37
TUBD1-207ENST00000587476 CNKSR2Q8WXI2 1034 aa12.73□□□□□ -0.37
TUBD1-207ENST00000587476 ZBTB22O15209 634 aa12.48□□□□□ -0.41
TUBD1-207ENST00000587476 DNAJC5BQ9UF47 199 aa12.42□□□□□ -0.42
TUBD1-207ENST00000587476 FOXD4L1Q9NU39 408 aa12.37□□□□□ -0.43
TUBD1-207ENST00000587476 HOXD11P31277 338 aaPredicted RBP12.36□□□□□ -0.43
TUBD1-207ENST00000587476 RNF216Q9NWF9 866 aaPredicted RBP12.35□□□□□ -0.43
TUBD1-207ENST00000587476 DCAF8L1A6NGE4 600 aa12.26□□□□□ -0.45
TUBD1-207ENST00000587476 SLC4A2P04920 1241 aa11.96□□□□□ -0.49
TUBD1-207ENST00000587476 MYCNP04198 464 aaPredicted RBP11.91□□□□□ -0.5
TUBD1-207ENST00000587476 ATXN8OSP0DMR3 200 aa11.9□□□□□ -0.5
TUBD1-207ENST00000587476 RNF39Q9H2S5 420 aa11.83□□□□□ -0.52
TUBD1-207ENST00000587476 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.82□□□□□ -0.52
TUBD1-207ENST00000587476 AMER1Q5JTC6 1135 aaPredicted RBP11.75□□□□□ -0.53
TUBD1-207ENST00000587476 CACNB1Q02641 598 aaPredicted RBP11.72□□□□□ -0.53
TUBD1-207ENST00000587476 FKBP8Q14318 412 aa11.67□□□□□ -0.54
TUBD1-207ENST00000587476 C1QBPQ07021 282 aaKnown RBP11.66□□□□□ -0.54
TUBD1-207ENST00000587476 RTN4Q9NQC3 1192 aaKnown RBP11.66□□□□□ -0.54
TUBD1-207ENST00000587476 U3KPZ7 1027 aaPredicted RBP11.6□□□□□ -0.55
TUBD1-207ENST00000587476 SLC24A1O60721 1099 aa11.58□□□□□ -0.56
TUBD1-207ENST00000587476 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.55□□□□□ -0.56
TUBD1-207ENST00000587476 HNRNPUL2Q1KMD3 747 aaKnown RBP11.55□□□□□ -0.56
TUBD1-207ENST00000587476 SAMD1Q6SPF0 538 aaPredicted RBP11.52□□□□□ -0.57
TUBD1-207ENST00000587476 ATF5Q9Y2D1 282 aaPredicted RBP11.46□□□□□ -0.57
TUBD1-207ENST00000587476 SPINK5Q9NQ38 1064 aaPredicted RBP11.36□□□□□ -0.59
TUBD1-207ENST00000587476 CAPN15O75808 1086 aa11.33□□□□□ -0.6
TUBD1-207ENST00000587476 APLP2Q06481 763 aa11.31□□□□□ -0.6
TUBD1-207ENST00000587476 ZNF219Q9P2Y4 722 aaPredicted RBP11.26□□□□□ -0.61
TUBD1-207ENST00000587476 TRHP20396 242 aaPredicted RBP11.22□□□□□ -0.61
TUBD1-207ENST00000587476 DSG3P32926 999 aa11.17□□□□□ -0.62
TUBD1-207ENST00000587476 FBXO3Q9UK99 471 aa11.14□□□□□ -0.63
TUBD1-207ENST00000587476 ABCB7O75027 752 aa11.11□□□□□ -0.63
TUBD1-207ENST00000587476 SPDYE4A6NLX3 237 aa11.09□□□□□ -0.63
TUBD1-207ENST00000587476 FBLN2P98095 1184 aa11.03□□□□□ -0.64
TUBD1-207ENST00000587476 MKRN4PQ13434 485 aaPredicted RBP11.01□□□□□ -0.65
TUBD1-207ENST00000587476 PROM2Q8N271 834 aa10.99□□□□□ -0.65
TUBD1-207ENST00000587476 POLA2Q14181 598 aa10.95□□□□□ -0.66
TUBD1-207ENST00000587476 VASPP50552 380 aaPredicted RBP10.93□□□□□ -0.66
TUBD1-207ENST00000587476 ZBTB12Q9Y330 459 aaPredicted RBP10.84□□□□□ -0.67
TUBD1-207ENST00000587476 IFNLR1Q8IU57 520 aaPredicted RBP10.8□□□□□ -0.68
TUBD1-207ENST00000587476 PLCB2Q00722 1185 aa10.79□□□□□ -0.68
TUBD1-207ENST00000587476 DCAF8L2P0C7V8 631 aa10.75□□□□□ -0.69
TUBD1-207ENST00000587476 PKD2Q13563 968 aa10.67□□□□□ -0.7
TUBD1-207ENST00000587476 HAP1P54257 671 aaPredicted RBP10.65□□□□□ -0.7
TUBD1-207ENST00000587476 RBM42Q9BTD8 480 aaKnown RBP10.65□□□□□ -0.7
TUBD1-207ENST00000587476 OSCARQ8IYS5 282 aa10.64□□□□□ -0.71
TUBD1-207ENST00000587476 KLHL34Q8N239 644 aa10.62□□□□□ -0.71
TUBD1-207ENST00000587476 SPOCK2Q92563 424 aa10.61□□□□□ -0.71
TUBD1-207ENST00000587476 STAG3Q9UJ98 1225 aa10.61□□□□□ -0.71
TUBD1-207ENST00000587476 ZNF692Q9BU19 519 aaPredicted RBP10.59□□□□□ -0.71
TUBD1-207ENST00000587476 SPDYE2BA6NHP3 402 aa10.56□□□□□ -0.72
TUBD1-207ENST00000587476 SPDYE6P0CI01 402 aa10.56□□□□□ -0.72
TUBD1-207ENST00000587476 SPDYE2Q495Y8 402 aa10.56□□□□□ -0.72
TUBD1-207ENST00000587476 ECM2O94769 699 aaPredicted RBP10.54□□□□□ -0.72
TUBD1-207ENST00000587476 PLCD3Q8N3E9 789 aa10.53□□□□□ -0.72
TUBD1-207ENST00000587476 SSUH2Q9Y2M2 353 aa10.53□□□□□ -0.72
TUBD1-207ENST00000587476 VSIG10Q8N0Z9 540 aa10.52□□□□□ -0.73
TUBD1-207ENST00000587476 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.52□□□□□ -0.73
TUBD1-207ENST00000587476 BBXQ8WY36 941 aaPredicted RBP10.5□□□□□ -0.73
TUBD1-207ENST00000587476 BCANQ96GW7 911 aa10.49□□□□□ -0.73
TUBD1-207ENST00000587476 PABPN1Q86U42 306 aaKnown RBP eCLIP10.47□□□□□ -0.73
TUBD1-207ENST00000587476 MIER1Q8N108 512 aa10.46□□□□□ -0.73
TUBD1-207ENST00000587476 AKT1S1Q96B36 256 aa10.46□□□□□ -0.73
TUBD1-207ENST00000587476 PLEKHG5O94827 1062 aa10.42□□□□□ -0.74
TUBD1-207ENST00000587476 ZBTB47Q9UFB7 747 aaPredicted RBP10.41□□□□□ -0.74
TUBD1-207ENST00000587476 PAXIP1Q6ZW49 1069 aaPredicted RBP10.4□□□□□ -0.74
TUBD1-207ENST00000587476 RGL2O15211 777 aa10.38□□□□□ -0.75
TUBD1-207ENST00000587476 NPM1P06748 294 aaKnown RBP eCLIP10.38□□□□□ -0.75
TUBD1-207ENST00000587476 REM2Q8IYK8 340 aaPredicted RBP10.38□□□□□ -0.75
TUBD1-207ENST00000587476 CFAP44Q96MT7 982 aa10.37□□□□□ -0.75
TUBD1-207ENST00000587476 CIZ1Q9ULV3 898 aaPredicted RBP10.34□□□□□ -0.75
TUBD1-207ENST00000587476 CHRDL2Q6WN34 429 aa10.32□□□□□ -0.76
TUBD1-207ENST00000587476 SPRYD3Q8NCJ5 442 aa10.32□□□□□ -0.76
TUBD1-207ENST00000587476 TRIM41Q8WV44 630 aa10.32□□□□□ -0.76
TUBD1-207ENST00000587476 KDM2AQ9Y2K7 1162 aa10.3□□□□□ -0.76
TUBD1-207ENST00000587476 POTEHQ6S545 545 aa10.28□□□□□ -0.76
TUBD1-207ENST00000587476 TAOK2Q9UL54 1235 aa10.28□□□□□ -0.76
TUBD1-207ENST00000587476 PITPNM1O00562 1244 aa10.27□□□□□ -0.77
TUBD1-207ENST00000587476 CHGAP10645 457 aaKnown RBP10.26□□□□□ -0.77
TUBD1-207ENST00000587476 PRKCSHP14314 528 aaPredicted RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms