RNA–Protein interactions for RNA: ENST00000583879.5

VAPA-207, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-207ENST00000583879 ASIPP42127 132 aa3.4□□□□□ -1.87
VAPA-207ENST00000583879 CYCSP99999 105 aaKnown RBP3.4□□□□□ -1.87
VAPA-207ENST00000583879 ZFP69Q49AA0 526 aa3.4□□□□□ -1.87
VAPA-207ENST00000583879 LRRC37A5PQ49AS3 106 aa3.4□□□□□ -1.87
VAPA-207ENST00000583879 Q75L30 129 aa3.4□□□□□ -1.87
VAPA-207ENST00000583879 OR5A1Q8NGJ0 315 aa3.4□□□□□ -1.87
VAPA-207ENST00000583879 ZC2HC1AQ96GY0 325 aa3.4□□□□□ -1.87
VAPA-207ENST00000583879 RBM38Q9H0Z9 239 aaKnown RBP3.4□□□□□ -1.87
VAPA-207ENST00000583879 IL36BQ9NZH7 164 aa3.4□□□□□ -1.87
VAPA-207ENST00000583879 TRBV7-3A0A075B6L6 115 aa3.39□□□□□ -1.87
VAPA-207ENST00000583879 TRBV10-1A0A0K0K1A3 114 aa3.39□□□□□ -1.87
VAPA-207ENST00000583879 J3KT08 172 aa3.39□□□□□ -1.87
VAPA-207ENST00000583879 CCL25O15444 150 aa3.39□□□□□ -1.87
VAPA-207ENST00000583879 CRPP02741 224 aa3.39□□□□□ -1.87
VAPA-207ENST00000583879 ARMS2P0C7Q2 107 aa3.39□□□□□ -1.87
VAPA-207ENST00000583879 RAB5AP20339 215 aa3.39□□□□□ -1.87
VAPA-207ENST00000583879 UBE2D3P61077 147 aa3.39□□□□□ -1.87
VAPA-207ENST00000583879 UBE2D2P62837 147 aa3.39□□□□□ -1.87
VAPA-207ENST00000583879 RPL36AP83881 106 aaKnown RBP3.39□□□□□ -1.87
VAPA-207ENST00000583879 RPL18AQ02543 176 aaKnown RBP3.39□□□□□ -1.87
VAPA-207ENST00000583879 SMAGPQ0VAQ4 97 aa3.39□□□□□ -1.87
VAPA-207ENST00000583879 RHEBQ15382 184 aa3.39□□□□□ -1.87
VAPA-207ENST00000583879 COL5A1-AS1Q5SY13 56 aa3.39□□□□□ -1.87
VAPA-207ENST00000583879 PRNTQ86SH4 94 aa3.39□□□□□ -1.87
VAPA-207ENST00000583879 C5orf17Q8NAS9 161 aa3.39□□□□□ -1.87
VAPA-207ENST00000583879 RPL36ALQ969Q0 106 aaKnown RBP3.39□□□□□ -1.87
VAPA-207ENST00000583879 HIST1H2BAQ96A08 127 aa3.39□□□□□ -1.87
VAPA-207ENST00000583879 DPH3Q96FX2 82 aa3.39□□□□□ -1.87
VAPA-207ENST00000583879 LINC01600Q96MT4 127 aa3.39□□□□□ -1.87
VAPA-207ENST00000583879 SNHG12Q9BXW3 62 aa3.39□□□□□ -1.87
VAPA-207ENST00000583879 SMIM3Q9BZL3 60 aa3.39□□□□□ -1.87
VAPA-207ENST00000583879 DPH3P1Q9H4G8 78 aa3.39□□□□□ -1.87
VAPA-207ENST00000583879 NAT8BQ9UHF3 227 aa3.39□□□□□ -1.87
VAPA-207ENST00000583879 EPDR1Q9UM22 224 aa3.39□□□□□ -1.87
VAPA-207ENST00000583879 TRBV6-8A0A0A6YYG3 113 aa3.38□□□□□ -1.87
VAPA-207ENST00000583879 A0A1B0GV50 99 aa3.38□□□□□ -1.87
VAPA-207ENST00000583879 HLA-DQA1P01909 254 aa3.38□□□□□ -1.87
VAPA-207ENST00000583879 ANGP03950 147 aaKnown RBP3.38□□□□□ -1.87
VAPA-207ENST00000583879 SMIM17P0DL12 118 aa3.38□□□□□ -1.87
VAPA-207ENST00000583879 CIRBPQ14011 172 aaKnown RBP3.38□□□□□ -1.87
VAPA-207ENST00000583879 MIAQ16674 131 aa3.38□□□□□ -1.87
VAPA-207ENST00000583879 MPV17L2Q567V2 206 aa3.38□□□□□ -1.87
VAPA-207ENST00000583879 FAM74A4Q5TZK3 123 aa3.38□□□□□ -1.87
VAPA-207ENST00000583879 PPP1R1CQ8WVI7 109 aa3.38□□□□□ -1.87
VAPA-207ENST00000583879 TMEM18Q96B42 140 aa3.38□□□□□ -1.87
VAPA-207ENST00000583879 PSMG3Q9BT73 122 aaPredicted RBP3.38□□□□□ -1.87
VAPA-207ENST00000583879 A0A087WYN8 130 aa3.37□□□□□ -1.87
VAPA-207ENST00000583879 FAM240AA0A1B0GVK7 77 aa3.37□□□□□ -1.87
VAPA-207ENST00000583879 GRIFINA4D1Z8 144 aa3.37□□□□□ -1.87
VAPA-207ENST00000583879 C1orf196B1AJZ1 125 aa3.37□□□□□ -1.87
VAPA-207ENST00000583879 B4DEV8 164 aa3.37□□□□□ -1.87
VAPA-207ENST00000583879 SMKR1H3BMG3 65 aa3.37□□□□□ -1.87
VAPA-207ENST00000583879 H3BVH4 76 aa3.37□□□□□ -1.87
VAPA-207ENST00000583879 MPC2O95563 127 aa3.37□□□□□ -1.87
VAPA-207ENST00000583879 ARL14EPLP0DKL9 152 aa3.37□□□□□ -1.87
VAPA-207ENST00000583879 GCHFRP30047 84 aa3.37□□□□□ -1.87
VAPA-207ENST00000583879 CRIP1P50238 77 aa3.37□□□□□ -1.87
VAPA-207ENST00000583879 H2BFSP57053 126 aa3.37□□□□□ -1.87
VAPA-207ENST00000583879 CNBPP62633 177 aaKnown RBP3.37□□□□□ -1.87
VAPA-207ENST00000583879 CLLU1Q5K131 121 aa3.37□□□□□ -1.87
VAPA-207ENST00000583879 KRTAP26-1Q6PEX3 210 aa3.37□□□□□ -1.87
VAPA-207ENST00000583879 OR10G8Q8NGN5 311 aa3.37□□□□□ -1.87
VAPA-207ENST00000583879 MBD3L1Q8WWY6 194 aa3.37□□□□□ -1.87
VAPA-207ENST00000583879 RNF185Q96GF1 192 aa3.37□□□□□ -1.87
VAPA-207ENST00000583879 PRR34Q9NV39 138 aa3.37□□□□□ -1.87
VAPA-207ENST00000583879 LAMTOR2Q9Y2Q5 125 aa3.37□□□□□ -1.87
VAPA-207ENST00000583879 PHLDA3Q9Y5J5 127 aa3.37□□□□□ -1.87
VAPA-207ENST00000583879 IGHV3-64A0A075B6Q5 118 aa3.36□□□□□ -1.87
VAPA-207ENST00000583879 A0A0U1RQV1 116 aa3.36□□□□□ -1.87
VAPA-207ENST00000583879 INMT-MINDY4F8WBC2 141 aa3.36□□□□□ -1.87
VAPA-207ENST00000583879 M0R381 172 aa3.36□□□□□ -1.87
VAPA-207ENST00000583879 CXorf1O96002 111 aa3.36□□□□□ -1.87
VAPA-207ENST00000583879 IFNA7P01567 189 aa3.36□□□□□ -1.87
VAPA-207ENST00000583879 TPT1P13693 172 aaKnown RBP3.36□□□□□ -1.87
VAPA-207ENST00000583879 S100A2P29034 98 aa3.36□□□□□ -1.87
VAPA-207ENST00000583879 AMTP48728 403 aa3.36□□□□□ -1.87
VAPA-207ENST00000583879 KRTAP10-8P60410 259 aa3.36□□□□□ -1.87
VAPA-207ENST00000583879 RPL24P83731 157 aaKnown RBP3.36□□□□□ -1.87
VAPA-207ENST00000583879 TMEM241Q24JQ0 296 aa3.36□□□□□ -1.87
VAPA-207ENST00000583879 NTM-AS1Q6ZSK4 140 aa3.36□□□□□ -1.87
VAPA-207ENST00000583879 MRPL55Q7Z7F7 128 aaKnown RBP3.36□□□□□ -1.87
VAPA-207ENST00000583879 CBLN2Q8IUK8 224 aa3.36□□□□□ -1.87
VAPA-207ENST00000583879 LINC00269Q8N2A0 174 aa3.36□□□□□ -1.87
VAPA-207ENST00000583879 CHCHD5Q9BSY4 110 aa3.36□□□□□ -1.87
VAPA-207ENST00000583879 NKX6-2Q9C056 277 aaPredicted RBP3.36□□□□□ -1.87
VAPA-207ENST00000583879 TMEM167BQ9NRX6 74 aa3.36□□□□□ -1.87
VAPA-207ENST00000583879 PLAC8Q9NZF1 115 aa3.36□□□□□ -1.87
VAPA-207ENST00000583879 TNFSF18Q9UNG2 199 aa3.36□□□□□ -1.87
VAPA-207ENST00000583879 ARL2-SNX15V9GYD0 113 aa3.36□□□□□ -1.87
VAPA-207ENST00000583879 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.35□□□□□ -1.87
VAPA-207ENST00000583879 A0A0J9YXV3 536 aa3.35□□□□□ -1.87
VAPA-207ENST00000583879 hDV102S1A0JD36 115 aa3.35□□□□□ -1.87
VAPA-207ENST00000583879 A6NDN8 102 aa3.35□□□□□ -1.87
VAPA-207ENST00000583879 PHOX2AO14813 284 aa3.35□□□□□ -1.87
VAPA-207ENST00000583879 GAS8-AS1O95177 125 aa3.35□□□□□ -1.87
VAPA-207ENST00000583879 CHTF8P0CG12 524 aa3.35□□□□□ -1.87
VAPA-207ENST00000583879 ATP6V0CP27449 155 aa3.35□□□□□ -1.87
VAPA-207ENST00000583879 SERF2P84101 59 aa3.35□□□□□ -1.87
VAPA-207ENST00000583879 NEXN-AS1Q8NBZ9 246 aa3.35□□□□□ -1.87
VAPA-207ENST00000583879 SPACA4Q8TDM5 124 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms