RNA–Protein interactions for RNA: ENST00000577300.1

SMCHD1-202, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 506 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-202ENST00000577300 KIAA2026Q5HYC2 2103 aa1.87□□□□□ -2.11
SMCHD1-202ENST00000577300 PTPRSQ13332 1948 aa1.86□□□□□ -2.11
SMCHD1-202ENST00000577300 IGHV3-43A0A0B4J1X8 118 aa1.86□□□□□ -2.11
SMCHD1-202ENST00000577300 TRBV10-3A0A0K0K1G6 114 aa1.86□□□□□ -2.11
SMCHD1-202ENST00000577300 TMEM14DPA8MWL7 114 aa1.86□□□□□ -2.11
SMCHD1-202ENST00000577300 LHBP01229 141 aa1.86□□□□□ -2.11
SMCHD1-202ENST00000577300 Q6ZS52 159 aa1.86□□□□□ -2.11
SMCHD1-202ENST00000577300 LYPD6Q86Y78 171 aa1.86□□□□□ -2.11
SMCHD1-202ENST00000577300 C15orf56Q8N910 161 aa1.86□□□□□ -2.11
SMCHD1-202ENST00000577300 FGF23Q9GZV9 251 aaPredicted RBP1.86□□□□□ -2.11
SMCHD1-202ENST00000577300 S4R3C0 116 aa1.86□□□□□ -2.11
SMCHD1-202ENST00000577300 NHSL1Q5SYE7 1610 aa1.86□□□□□ -2.11
SMCHD1-202ENST00000577300 DSCAMO60469 2012 aa1.86□□□□□ -2.11
SMCHD1-202ENST00000577300 DSCAML1Q8TD84 2053 aa1.86□□□□□ -2.11
SMCHD1-202ENST00000577300 PAPPA2Q9BXP8 1791 aa1.85□□□□□ -2.11
SMCHD1-202ENST00000577300 IGLV1-50A0A075B6I6 118 aa1.85□□□□□ -2.11
SMCHD1-202ENST00000577300 IGHV3-74A0A0B4J1X5 117 aa1.85□□□□□ -2.11
SMCHD1-202ENST00000577300 IGHV5-10-1A0A0J9YXX1 117 aa1.85□□□□□ -2.11
SMCHD1-202ENST00000577300 CHKB-CPT1BH3BT56 60 aa1.85□□□□□ -2.11
SMCHD1-202ENST00000577300 PSCAO43653 123 aa1.85□□□□□ -2.11
SMCHD1-202ENST00000577300 SH2D1AO60880 128 aa1.85□□□□□ -2.11
SMCHD1-202ENST00000577300 ERC2-IT1O76042 136 aa1.85□□□□□ -2.11
SMCHD1-202ENST00000577300 IGHV3-30-3P0DP02 117 aa1.85□□□□□ -2.11
SMCHD1-202ENST00000577300 ROMO1P60602 79 aa1.85□□□□□ -2.11
SMCHD1-202ENST00000577300 ZNF826PQ6ZT77 177 aa1.85□□□□□ -2.11
SMCHD1-202ENST00000577300 LYZL2Q7Z4W2 148 aa1.85□□□□□ -2.11
SMCHD1-202ENST00000577300 SCGB3A1Q96QR1 104 aa1.85□□□□□ -2.11
SMCHD1-202ENST00000577300 C22orf24Q9Y442 160 aa1.85□□□□□ -2.11
SMCHD1-202ENST00000577300 PLXNA3P51805 1871 aa1.85□□□□□ -2.11
SMCHD1-202ENST00000577300 PLXNB1O43157 2135 aa1.85□□□□□ -2.11
SMCHD1-202ENST00000577300 MYO9BQ13459 2157 aa1.85□□□□□ -2.11
SMCHD1-202ENST00000577300 SDK2Q58EX2 2172 aa1.85□□□□□ -2.11
SMCHD1-202ENST00000577300 PCDH15Q96QU1 1955 aa1.85□□□□□ -2.11
SMCHD1-202ENST00000577300 DUOX1Q9NRD9 1551 aa1.85□□□□□ -2.11
SMCHD1-202ENST00000577300 LRRC37A3O60309 1634 aa1.84□□□□□ -2.11
SMCHD1-202ENST00000577300 DDX60Q8IY21 1712 aaKnown RBP1.84□□□□□ -2.11
SMCHD1-202ENST00000577300 TRAV23DV6A0A075B6W5 121 aa1.84□□□□□ -2.11
SMCHD1-202ENST00000577300 TRBV6-8A0A0A6YYG3 113 aa1.84□□□□□ -2.11
SMCHD1-202ENST00000577300 LINC01546A6NGU7 62 aa1.84□□□□□ -2.11
SMCHD1-202ENST00000577300 ZNF815PA8K554 130 aa1.84□□□□□ -2.11
SMCHD1-202ENST00000577300 IGHV3-11P01762 117 aa1.84□□□□□ -2.11
SMCHD1-202ENST00000577300 IGHV3-30P01768 117 aa1.84□□□□□ -2.11
SMCHD1-202ENST00000577300 P0C880 135 aa1.84□□□□□ -2.11
SMCHD1-202ENST00000577300 IGHV3-30-5P0DP03 117 aa1.84□□□□□ -2.11
SMCHD1-202ENST00000577300 DEFA4P12838 97 aa1.84□□□□□ -2.11
SMCHD1-202ENST00000577300 EDDM3BP56851 147 aa1.84□□□□□ -2.11
SMCHD1-202ENST00000577300 FXYD7P58549 80 aa1.84□□□□□ -2.11
SMCHD1-202ENST00000577300 LYZL1Q6UWQ5 148 aa1.84□□□□□ -2.11
SMCHD1-202ENST00000577300 CNEP1R1Q8N9A8 125 aa1.84□□□□□ -2.11
SMCHD1-202ENST00000577300 LINC01560Q8TB33 94 aa1.84□□□□□ -2.11
SMCHD1-202ENST00000577300 WFDC6Q9BQY6 131 aa1.84□□□□□ -2.11
SMCHD1-202ENST00000577300 XAGE1AQ9HD64 81 aa1.84□□□□□ -2.11
SMCHD1-202ENST00000577300 CDC42SE2Q9NRR3 84 aa1.84□□□□□ -2.11
SMCHD1-202ENST00000577300 DLEC1Q9Y238 1755 aa1.84□□□□□ -2.12
SMCHD1-202ENST00000577300 KIAA1549LQ6ZVL6 1849 aa1.84□□□□□ -2.12
SMCHD1-202ENST00000577300 PCNX2A6NKB5 2137 aa1.84□□□□□ -2.12
SMCHD1-202ENST00000577300 MED13Q9UHV7 2174 aa1.83□□□□□ -2.12
SMCHD1-202ENST00000577300 BAZ2BQ9UIF8 2168 aaKnown RBP1.83□□□□□ -2.12
SMCHD1-202ENST00000577300 PLXNB3Q9ULL4 1909 aa1.83□□□□□ -2.12
SMCHD1-202ENST00000577300 THADAQ6YHU6 1953 aa1.83□□□□□ -2.12
SMCHD1-202ENST00000577300 FCGBPQ9Y6R7 5405 aaPredicted RBP1.83□□□□□ -2.12
SMCHD1-202ENST00000577300 NRAPQ86VF7 1730 aa1.83□□□□□ -2.12
SMCHD1-202ENST00000577300 TOGARAM1Q9Y4F4 1720 aa1.83□□□□□ -2.12
SMCHD1-202ENST00000577300 SIP14410 1827 aa1.83□□□□□ -2.12
SMCHD1-202ENST00000577300 TRAV10A0A0B4J240 114 aa1.83□□□□□ -2.12
SMCHD1-202ENST00000577300 PIGBOS1A0A0B4J2F0 54 aa1.83□□□□□ -2.12
SMCHD1-202ENST00000577300 TRBV7-4A0A0J9YYF1 115 aa1.83□□□□□ -2.12
SMCHD1-202ENST00000577300 LOC101927531A0A1B0GV80 90 aa1.83□□□□□ -2.12
SMCHD1-202ENST00000577300 LECT2O14960 151 aa1.83□□□□□ -2.12
SMCHD1-202ENST00000577300 IGLV3-25P01717 112 aa1.83□□□□□ -2.12
SMCHD1-202ENST00000577300 IGHV1-69P01742 117 aa1.83□□□□□ -2.12
SMCHD1-202ENST00000577300 TRGV3P03979 118 aa1.83□□□□□ -2.12
SMCHD1-202ENST00000577300 ARMS2P0C7Q2 107 aa1.83□□□□□ -2.12
SMCHD1-202ENST00000577300 CD24P25063 80 aa1.83□□□□□ -2.12
SMCHD1-202ENST00000577300 FXYD3Q14802 87 aa1.83□□□□□ -2.12
SMCHD1-202ENST00000577300 RNASE13Q5GAN3 156 aaKnown RBP1.83□□□□□ -2.12
SMCHD1-202ENST00000577300 C10orf128Q5T292 105 aa1.83□□□□□ -2.12
SMCHD1-202ENST00000577300 ATP5EP2Q5VTU8 51 aa1.83□□□□□ -2.12
SMCHD1-202ENST00000577300 Q6ZQT0 140 aa1.83□□□□□ -2.12
SMCHD1-202ENST00000577300 C1orf64Q8NEQ6 169 aa1.83□□□□□ -2.12
SMCHD1-202ENST00000577300 LIMD2Q9BT23 127 aa1.83□□□□□ -2.12
SMCHD1-202ENST00000577300 RPP21Q9H633 154 aaKnown RBP1.83□□□□□ -2.12
SMCHD1-202ENST00000577300 C8orf17Q9NRJ1 99 aa1.83□□□□□ -2.12
SMCHD1-202ENST00000577300 ZNF355PQ9NSJ1 428 aa1.83□□□□□ -2.12
SMCHD1-202ENST00000577300 U3KQK5 164 aa1.83□□□□□ -2.12
SMCHD1-202ENST00000577300 MUC6Q6W4X9 2439 aa1.83□□□□□ -2.12
SMCHD1-202ENST00000577300 UBR3Q6ZT12 1888 aa1.83□□□□□ -2.12
SMCHD1-202ENST00000577300 MYO16Q9Y6X6 1858 aa1.83□□□□□ -2.12
SMCHD1-202ENST00000577300 LRP6O75581 1613 aa1.83□□□□□ -2.12
SMCHD1-202ENST00000577300 A0A0J9YY99 117 aa1.82□□□□□ -2.12
SMCHD1-202ENST00000577300 CXorf51AA0A1B0GTR3 108 aa1.82□□□□□ -2.12
SMCHD1-202ENST00000577300 A6NED7 52 aa1.82□□□□□ -2.12
SMCHD1-202ENST00000577300 C11orf86A6NJI1 115 aa1.82□□□□□ -2.12
SMCHD1-202ENST00000577300 A8MWP4 228 aa1.82□□□□□ -2.12
SMCHD1-202ENST00000577300 CLPSP04118 112 aa1.82□□□□□ -2.12
SMCHD1-202ENST00000577300 COX6B1P14854 86 aa1.82□□□□□ -2.12
SMCHD1-202ENST00000577300 MIAQ16674 131 aa1.82□□□□□ -2.12
SMCHD1-202ENST00000577300 LUZP6Q538Z0 58 aa1.82□□□□□ -2.12
SMCHD1-202ENST00000577300 LINC00846Q9NV44 126 aa1.82□□□□□ -2.12
SMCHD1-202ENST00000577300 TIMM8BQ9Y5J9 83 aaPredicted RBP1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms