RNA–Protein interactions for RNA: ENST00000576484.1

CDC27-219, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-219ENST00000576484 TMEM203Q969S6 136 aa0.15□□□□□ -2.39
CDC27-219ENST00000576484 LINC00472Q9H8W2 130 aa0.15□□□□□ -2.39
CDC27-219ENST00000576484 LINC00474Q9P2X8 69 aa0.15□□□□□ -2.39
CDC27-219ENST00000576484 PRO0255Q9UI72 69 aa0.15□□□□□ -2.39
CDC27-219ENST00000576484 CSMD3Q7Z407 3707 aa0.14□□□□□ -2.39
CDC27-219ENST00000576484 KDM3BQ7LBC6 1761 aa0.14□□□□□ -2.39
CDC27-219ENST00000576484 IGLC7A0M8Q6 106 aa0.14□□□□□ -2.39
CDC27-219ENST00000576484 F6UZH7 168 aa0.14□□□□□ -2.39
CDC27-219ENST00000576484 HMGN4O00479 90 aa0.14□□□□□ -2.39
CDC27-219ENST00000576484 ATP5EP56381 51 aaPredicted RBP0.14□□□□□ -2.39
CDC27-219ENST00000576484 TMEM170BQ5T4T1 132 aa0.14□□□□□ -2.39
CDC27-219ENST00000576484 DPH3P1Q9H4G8 78 aa0.14□□□□□ -2.39
CDC27-219ENST00000576484 LINC01558Q9Y6Z2 57 aa0.14□□□□□ -2.39
CDC27-219ENST00000576484 U3KQA8 63 aa0.14□□□□□ -2.39
CDC27-219ENST00000576484 WNK3Q9BYP7 1800 aa0.13□□□□□ -2.39
CDC27-219ENST00000576484 FAM24AA6NFZ4 105 aa0.13□□□□□ -2.39
CDC27-219ENST00000576484 LINC00587B1AMM8 73 aa0.13□□□□□ -2.39
CDC27-219ENST00000576484 APOC3P02656 99 aa0.13□□□□□ -2.39
CDC27-219ENST00000576484 S100A3P33764 101 aa0.13□□□□□ -2.39
CDC27-219ENST00000576484 PPP3R1P63098 170 aa0.13□□□□□ -2.39
CDC27-219ENST00000576484 HAMPP81172 84 aa0.13□□□□□ -2.39
CDC27-219ENST00000576484 SPCS1Q9Y6A9 102 aa0.13□□□□□ -2.39
CDC27-219ENST00000576484 WDR7Q9Y4E6 1490 aa0.13□□□□□ -2.39
CDC27-219ENST00000576484 EIF4G3O43432 1585 aaKnown RBP0.13□□□□□ -2.39
CDC27-219ENST00000576484 RIMS1Q86UR5 1692 aaKnown RBP0.13□□□□□ -2.39
CDC27-219ENST00000576484 ROBO1Q9Y6N7 1651 aa0.13□□□□□ -2.39
CDC27-219ENST00000576484 SHROOM2Q13796 1616 aa0.13□□□□□ -2.39
CDC27-219ENST00000576484 BIVM-ERCC5R4GMW8 1640 aa0.13□□□□□ -2.39
CDC27-219ENST00000576484 CUL7Q14999 1698 aa0.12□□□□□ -2.39
CDC27-219ENST00000576484 BCE1O60756 84 aa0.12□□□□□ -2.39
CDC27-219ENST00000576484 PLXNB2O15031 1838 aa0.12□□□□□ -2.39
CDC27-219ENST00000576484 ZNF236Q9UL36 1845 aa0.12□□□□□ -2.39
CDC27-219ENST00000576484 LRP6O75581 1613 aa0.12□□□□□ -2.39
CDC27-219ENST00000576484 C10orf71Q711Q0 1435 aa0.12□□□□□ -2.39
CDC27-219ENST00000576484 AKAP6Q13023 2319 aa0.12□□□□□ -2.39
CDC27-219ENST00000576484 ABCA2Q9BZC7 2435 aa0.11□□□□□ -2.39
CDC27-219ENST00000576484 DCDP81605 110 aaKnown RBP0.11□□□□□ -2.39
CDC27-219ENST00000576484 MRPS10P82664 201 aaKnown RBP0.11□□□□□ -2.39
CDC27-219ENST00000576484 CDC42SE2Q9NRR3 84 aa0.11□□□□□ -2.39
CDC27-219ENST00000576484 GNG8Q9UK08 70 aa0.11□□□□□ -2.39
CDC27-219ENST00000576484 KIF21AQ7Z4S6 1674 aa0.11□□□□□ -2.39
CDC27-219ENST00000576484 PIEZO2Q9H5I5 2752 aa0.11□□□□□ -2.39
CDC27-219ENST00000576484 LAMC1P11047 1609 aa0.1□□□□□ -2.39
CDC27-219ENST00000576484 TRAV22A0A0B4J277 110 aa0.1□□□□□ -2.39
CDC27-219ENST00000576484 CHKB-CPT1BH3BT56 60 aa0.1□□□□□ -2.39
CDC27-219ENST00000576484 SFT2D2O95562 160 aa0.1□□□□□ -2.39
CDC27-219ENST00000576484 Q6JHZ5 121 aa0.1□□□□□ -2.39
CDC27-219ENST00000576484 SVBPQ8N300 66 aa0.1□□□□□ -2.39
CDC27-219ENST00000576484 ZFHX3Q15911 3703 aa0.1□□□□□ -2.39
CDC27-219ENST00000576484 MYOM1P52179 1685 aa0.1□□□□□ -2.39
CDC27-219ENST00000576484 PLCE1Q9P212 2302 aa0.1□□□□□ -2.39
CDC27-219ENST00000576484 NCOA3Q9Y6Q9 1424 aa0.1□□□□□ -2.39
CDC27-219ENST00000576484 ERCC6L2Q5T890 1561 aa0.1□□□□□ -2.39
CDC27-219ENST00000576484 CACNA1AO00555 2505 aa0.1□□□□□ -2.39
CDC27-219ENST00000576484 NCOR1O75376 2440 aa0.09□□□□□ -2.39
CDC27-219ENST00000576484 CHD6Q8TD26 2715 aa0.09□□□□□ -2.39
CDC27-219ENST00000576484 PTPRQQ9UMZ3 2332 aa0.09□□□□□ -2.39
CDC27-219ENST00000576484 MAPKBP1O60336 1514 aa0.09□□□□□ -2.39
CDC27-219ENST00000576484 M0R3E3 92 aa0.09□□□□□ -2.4
CDC27-219ENST00000576484 IFITM1P13164 125 aa0.09□□□□□ -2.4
CDC27-219ENST00000576484 S100A1P23297 94 aa0.09□□□□□ -2.4
CDC27-219ENST00000576484 Q8IZM0 81 aa0.09□□□□□ -2.4
CDC27-219ENST00000576484 FAM167A-AS1Q96KT0 104 aa0.09□□□□□ -2.4
CDC27-219ENST00000576484 UQCR10Q9UDW1 63 aa0.09□□□□□ -2.4
CDC27-219ENST00000576484 SHANK2Q9UPX8 1470 aa0.09□□□□□ -2.4
CDC27-219ENST00000576484 NHSL1Q5SYE7 1610 aa0.09□□□□□ -2.4
CDC27-219ENST00000576484 PTPN13Q12923 2485 aa0.08□□□□□ -2.4
CDC27-219ENST00000576484 SCAPERQ9BY12 1400 aa0.08□□□□□ -2.4
CDC27-219ENST00000576484 CFDP00746 253 aaPredicted RBP0.08□□□□□ -2.4
CDC27-219ENST00000576484 GNG11P61952 73 aa0.08□□□□□ -2.4
CDC27-219ENST00000576484 WFDC2Q14508 124 aa0.08□□□□□ -2.4
CDC27-219ENST00000576484 TP53AIP1Q9HCN2 124 aa0.08□□□□□ -2.4
CDC27-219ENST00000576484 NXT2Q9NPJ8 142 aaKnown RBP0.08□□□□□ -2.4
CDC27-219ENST00000576484 PSME4Q14997 1843 aa0.08□□□□□ -2.4
CDC27-219ENST00000576484 SBF2Q86WG5 1849 aa0.08□□□□□ -2.4
CDC27-219ENST00000576484 NSD1Q96L73 2696 aaPredicted RBP0.08□□□□□ -2.4
CDC27-219ENST00000576484 FAM135AQ9P2D6 1515 aa0.08□□□□□ -2.4
CDC27-219ENST00000576484 FLNCQ14315 2725 aa0.07□□□□□ -2.4
CDC27-219ENST00000576484 ANKRD17O75179 2603 aaKnown RBP0.07□□□□□ -2.4
CDC27-219ENST00000576484 H3BQ15 152 aa0.07□□□□□ -2.4
CDC27-219ENST00000576484 I3L2K1 104 aa0.07□□□□□ -2.4
CDC27-219ENST00000576484 MGPP08493 103 aa0.07□□□□□ -2.4
CDC27-219ENST00000576484 WHAMMP3Q1A5X7 153 aa0.07□□□□□ -2.4
CDC27-219ENST00000576484 PZPP20742 1482 aa0.07□□□□□ -2.4
CDC27-219ENST00000576484 WNK2Q9Y3S1 2297 aa0.07□□□□□ -2.4
CDC27-219ENST00000576484 NRKQ7Z2Y5 1582 aa0.06□□□□□ -2.4
CDC27-219ENST00000576484 PKD1L1Q8TDX9 2849 aa0.06□□□□□ -2.4
CDC27-219ENST00000576484 RAPGEF6Q8TEU7 1601 aa0.06□□□□□ -2.4
CDC27-219ENST00000576484 Q5VSD8 79 aa0.06□□□□□ -2.4
CDC27-219ENST00000576484 SPRR4Q96PI1 79 aa0.06□□□□□ -2.4
CDC27-219ENST00000576484 TENM4Q6N022 2769 aa0.06□□□□□ -2.4
CDC27-219ENST00000576484 PKDREJQ9NTG1 2253 aa0.06□□□□□ -2.4
CDC27-219ENST00000576484 GOLGA4Q13439 2230 aaKnown RBP0.05□□□□□ -2.4
CDC27-219ENST00000576484 HMGXB3Q12766 1538 aa0.05□□□□□ -2.4
CDC27-219ENST00000576484 NAP1L6A6NFF2 107 aa0.05□□□□□ -2.4
CDC27-219ENST00000576484 IGLC1P0CG04 106 aa0.05□□□□□ -2.4
CDC27-219ENST00000576484 UBE2D3P61077 147 aa0.05□□□□□ -2.4
CDC27-219ENST00000576484 UBE2D2P62837 147 aa0.05□□□□□ -2.4
CDC27-219ENST00000576484 Q0VG73 95 aa0.05□□□□□ -2.4
CDC27-219ENST00000576484 TMEM263Q8WUH6 116 aaKnown RBP0.05□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms