RNA–Protein interactions for RNA: ENST00000576024.1

TP53-216, Transcript of tumor protein p53, humanhuman

TSL 1 (best)

Gene TP53, Length 175 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-216ENST00000576024 SSSCA1O60232 199 aa0.07□□□□□ -2.4
TP53-216ENST00000576024 TSPAN19P0C672 248 aa0.07□□□□□ -2.4
TP53-216ENST00000576024 TRAPPC2P0DI81 140 aa0.07□□□□□ -2.4
TP53-216ENST00000576024 TRAPPC2BP0DI82 140 aa0.07□□□□□ -2.4
TP53-216ENST00000576024 COX8AP10176 69 aa0.07□□□□□ -2.4
TP53-216ENST00000576024 KRTDAPP60985 99 aa0.07□□□□□ -2.4
TP53-216ENST00000576024 NPC2P61916 151 aa0.07□□□□□ -2.4
TP53-216ENST00000576024 UBE2L3P68036 154 aaKnown RBP0.07□□□□□ -2.4
TP53-216ENST00000576024 MRPS10P82664 201 aaKnown RBP0.07□□□□□ -2.4
TP53-216ENST00000576024 WFDC2Q14508 124 aa0.07□□□□□ -2.4
TP53-216ENST00000576024 C9orf153Q5TBE3 101 aa0.07□□□□□ -2.4
TP53-216ENST00000576024 Q6JHZ5 121 aa0.07□□□□□ -2.4
TP53-216ENST00000576024 MRPL54Q6P161 138 aaKnown RBP0.07□□□□□ -2.4
TP53-216ENST00000576024 SVBPQ8N300 66 aa0.07□□□□□ -2.4
TP53-216ENST00000576024 C1orf54Q8WWF1 131 aa0.07□□□□□ -2.4
TP53-216ENST00000576024 DPH3Q96FX2 82 aa0.07□□□□□ -2.4
TP53-216ENST00000576024 USMG5Q96IX5 58 aa0.07□□□□□ -2.4
TP53-216ENST00000576024 Q96NJ1 140 aa0.07□□□□□ -2.4
TP53-216ENST00000576024 C12orf57Q99622 126 aa0.07□□□□□ -2.4
TP53-216ENST00000576024 MGST2Q99735 147 aa0.07□□□□□ -2.4
TP53-216ENST00000576024 SNRNP25Q9BV90 132 aaKnown RBP0.07□□□□□ -2.4
TP53-216ENST00000576024 AGPAT4-IT1Q9H0P7 198 aa0.07□□□□□ -2.4
TP53-216ENST00000576024 FXYD6Q9H0Q3 95 aa0.07□□□□□ -2.4
TP53-216ENST00000576024 DYNLRB1Q9NP97 96 aa0.07□□□□□ -2.4
TP53-216ENST00000576024 SERP1Q9Y6X1 66 aa0.07□□□□□ -2.4
TP53-216ENST00000576024 SHANK2Q9UPX8 1470 aa0.07□□□□□ -2.4
TP53-216ENST00000576024 PBRM1Q86U86 1689 aa0.07□□□□□ -2.4
TP53-216ENST00000576024 UBR3Q6ZT12 1888 aa0.07□□□□□ -2.4
TP53-216ENST00000576024 NISCHQ9Y2I1 1504 aa0.07□□□□□ -2.4
TP53-216ENST00000576024 ANKRD30AQ9BXX3 1397 aa0.06□□□□□ -2.4
TP53-216ENST00000576024 TMEM2Q9UHN6 1383 aa0.06□□□□□ -2.4
TP53-216ENST00000576024 LAMC3Q9Y6N6 1575 aa0.06□□□□□ -2.4
TP53-216ENST00000576024 ZZEF1O43149 2961 aa0.06□□□□□ -2.4
TP53-216ENST00000576024 PDZD2O15018 2839 aa0.06□□□□□ -2.4
TP53-216ENST00000576024 PATJQ8NI35 1801 aa0.06□□□□□ -2.4
TP53-216ENST00000576024 CAMSAP1Q5T5Y3 1602 aa0.06□□□□□ -2.4
TP53-216ENST00000576024 ZNF609O15014 1411 aa0.06□□□□□ -2.4
TP53-216ENST00000576024 PTPRGP23470 1445 aa0.06□□□□□ -2.4
TP53-216ENST00000576024 KMT2DO14686 5537 aa0.06□□□□□ -2.4
TP53-216ENST00000576024 USP54Q70EL1 1684 aa0.06□□□□□ -2.4
TP53-216ENST00000576024 POLA1P09884 1462 aaPredicted RBP0.06□□□□□ -2.4
TP53-216ENST00000576024 TCOF1Q13428 1488 aaKnown RBP0.06□□□□□ -2.4
TP53-216ENST00000576024 ZNF518AQ6AHZ1 1483 aa0.06□□□□□ -2.4
TP53-216ENST00000576024 CDK12Q9NYV4 1490 aaPredicted RBP0.06□□□□□ -2.4
TP53-216ENST00000576024 TRBV7-3A0A075B6L6 115 aa0.06□□□□□ -2.4
TP53-216ENST00000576024 A0A087WTM6 91 aa0.06□□□□□ -2.4
TP53-216ENST00000576024 A0A1B0GWA3 101 aa0.06□□□□□ -2.4
TP53-216ENST00000576024 IGLC7A0M8Q6 106 aa0.06□□□□□ -2.4
TP53-216ENST00000576024 CHKB-CPT1BH3BT56 60 aa0.06□□□□□ -2.4
TP53-216ENST00000576024 BCE1O60756 84 aa0.06□□□□□ -2.4
TP53-216ENST00000576024 SFT2D2O95562 160 aa0.06□□□□□ -2.4
TP53-216ENST00000576024 HMGN1P05114 100 aa0.06□□□□□ -2.4
TP53-216ENST00000576024 MGPP08493 103 aa0.06□□□□□ -2.4
TP53-216ENST00000576024 COX6B1P14854 86 aa0.06□□□□□ -2.4
TP53-216ENST00000576024 FGF7P21781 194 aa0.06□□□□□ -2.4
TP53-216ENST00000576024 UBE2D1P51668 147 aa0.06□□□□□ -2.4
TP53-216ENST00000576024 GNG11P61952 73 aa0.06□□□□□ -2.4
TP53-216ENST00000576024 S100A12P80511 92 aa0.06□□□□□ -2.4
TP53-216ENST00000576024 CATR1Q13166 79 aa0.06□□□□□ -2.4
TP53-216ENST00000576024 ALX1Q15699 326 aa0.06□□□□□ -2.4
TP53-216ENST00000576024 Q5VSD8 79 aa0.06□□□□□ -2.4
TP53-216ENST00000576024 C10orf82Q8WW14 230 aa0.06□□□□□ -2.4
TP53-216ENST00000576024 AMELXQ99217 191 aa0.06□□□□□ -2.4
TP53-216ENST00000576024 LINC00470Q9BZP3 86 aa0.06□□□□□ -2.4
TP53-216ENST00000576024 FAM107BQ9H098 131 aa0.06□□□□□ -2.4
TP53-216ENST00000576024 PRO1933Q9H354 126 aa0.06□□□□□ -2.4
TP53-216ENST00000576024 TP53AIP1Q9HCN2 124 aa0.06□□□□□ -2.4
TP53-216ENST00000576024 NXT2Q9NPJ8 142 aaKnown RBP0.06□□□□□ -2.4
TP53-216ENST00000576024 CRIPTQ9P021 101 aa0.06□□□□□ -2.4
TP53-216ENST00000576024 AP4S1Q9Y587 144 aa0.06□□□□□ -2.4
TP53-216ENST00000576024 LENEPQ9Y5L5 61 aa0.06□□□□□ -2.4
TP53-216ENST00000576024 USP9XQ93008 2570 aaPredicted RBP0.06□□□□□ -2.4
TP53-216ENST00000576024 TNS1Q9HBL0 1735 aaKnown RBP0.06□□□□□ -2.4
TP53-216ENST00000576024 NWD2Q9ULI1 1742 aa0.06□□□□□ -2.4
TP53-216ENST00000576024 SIPA1L3O60292 1781 aaPredicted RBP0.06□□□□□ -2.4
TP53-216ENST00000576024 KDM3BQ7LBC6 1761 aa0.06□□□□□ -2.4
TP53-216ENST00000576024 ERCC6L2Q5T890 1561 aa0.06□□□□□ -2.4
TP53-216ENST00000576024 TSC2P49815 1807 aa0.06□□□□□ -2.4
TP53-216ENST00000576024 KTN1Q86UP2 1357 aaKnown RBP0.06□□□□□ -2.4
TP53-216ENST00000576024 ITPR1Q14643 2758 aa0.06□□□□□ -2.4
TP53-216ENST00000576024 NBEAL2Q6ZNJ1 2754 aa0.06□□□□□ -2.4
TP53-216ENST00000576024 LRP5O75197 1615 aa0.05□□□□□ -2.4
TP53-216ENST00000576024 TRPM1Q7Z4N2 1603 aa0.05□□□□□ -2.4
TP53-216ENST00000576024 ARHGAP31Q2M1Z3 1444 aa0.05□□□□□ -2.4
TP53-216ENST00000576024 PPIP5K1Q6PFW1 1433 aa0.05□□□□□ -2.4
TP53-216ENST00000576024 CTTNBP2Q8WZ74 1663 aa0.05□□□□□ -2.4
TP53-216ENST00000576024 HUWE1Q7Z6Z7 4374 aaKnown RBP0.05□□□□□ -2.4
TP53-216ENST00000576024 ERCC6Q03468 1493 aa0.05□□□□□ -2.4
TP53-216ENST00000576024 TRAV30A0A087WSZ9 112 aa0.05□□□□□ -2.4
TP53-216ENST00000576024 NBPF19A0A087WUL8 3843 aa0.05□□□□□ -2.4
TP53-216ENST00000576024 UBE2L5PA0A1B0GUS4 154 aa0.05□□□□□ -2.4
TP53-216ENST00000576024 NAP1L6A6NFF2 107 aa0.05□□□□□ -2.4
TP53-216ENST00000576024 CPSF4LA6NMK7 179 aaKnown RBP0.05□□□□□ -2.4
TP53-216ENST00000576024 I3L3M4 83 aa0.05□□□□□ -2.4
TP53-216ENST00000576024 GNG7O60262 68 aa0.05□□□□□ -2.4
TP53-216ENST00000576024 COX6CP09669 75 aa0.05□□□□□ -2.4
TP53-216ENST00000576024 SPRR1AP35321 89 aa0.05□□□□□ -2.4
TP53-216ENST00000576024 CCL18P55774 89 aa0.05□□□□□ -2.4
TP53-216ENST00000576024 SEC11AP67812 179 aa0.05□□□□□ -2.4
TP53-216ENST00000576024 GTF2H5Q6ZYL4 71 aa0.05□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms