RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 IGHV3OR16-12A0A075B7B8 117 aa13.72□□□□□ -0.21
SCARF1-206ENST00000573852 TRAV4A0A0B4J268 109 aa13.72□□□□□ -0.21
SCARF1-206ENST00000573852 INSP01308 110 aa13.72□□□□□ -0.21
SCARF1-206ENST00000573852 DYNLRB2Q8TF09 96 aa13.72□□□□□ -0.21
SCARF1-206ENST00000573852 IGHV4-31P0DP07 118 aa13.72□□□□□ -0.21
SCARF1-206ENST00000573852 DEFB114Q30KQ6 69 aa13.72□□□□□ -0.21
SCARF1-206ENST00000573852 KHDC1LQ5JSQ8 128 aa13.72□□□□□ -0.21
SCARF1-206ENST00000573852 DGAT2L7PQ6IED9 249 aa13.72□□□□□ -0.21
SCARF1-206ENST00000573852 TRAV8-4A0A0B4J246 113 aa13.71□□□□□ -0.21
SCARF1-206ENST00000573852 IFITM1P13164 125 aa13.71□□□□□ -0.21
SCARF1-206ENST00000573852 XCL2Q9UBD3 114 aa13.71□□□□□ -0.21
SCARF1-206ENST00000573852 LST1O00453 97 aa13.71□□□□□ -0.22
SCARF1-206ENST00000573852 SNCGO76070 127 aa13.7□□□□□ -0.22
SCARF1-206ENST00000573852 C4orf3Q8WVX3 66 aa13.7□□□□□ -0.22
SCARF1-206ENST00000573852 CITED2Q99967 270 aaPredicted RBP13.7□□□□□ -0.22
SCARF1-206ENST00000573852 CR1P17927 2039 aa13.7□□□□□ -0.22
SCARF1-206ENST00000573852 Q8N2B8 174 aa13.7□□□□□ -0.22
SCARF1-206ENST00000573852 H3BT86 120 aa13.69□□□□□ -0.22
SCARF1-206ENST00000573852 LINC00694P0DN24 101 aa13.69□□□□□ -0.22
SCARF1-206ENST00000573852 LINC00242Q5T6M2 205 aa13.69□□□□□ -0.22
SCARF1-206ENST00000573852 AKAP9Q99996 3911 aa13.69□□□□□ -0.22
SCARF1-206ENST00000573852 NDUFA7O95182 113 aa13.69□□□□□ -0.22
SCARF1-206ENST00000573852 CHD6Q8TD26 2715 aa13.69□□□□□ -0.22
SCARF1-206ENST00000573852 FAM208BQ5VWN6 2430 aa13.69□□□□□ -0.22
SCARF1-206ENST00000573852 B5MCH6 92 aa13.68□□□□□ -0.22
SCARF1-206ENST00000573852 ZNF625Q96I27 306 aaPredicted RBP13.68□□□□□ -0.22
SCARF1-206ENST00000573852 Q9H8V8 135 aa13.68□□□□□ -0.22
SCARF1-206ENST00000573852 CACNA1AO00555 2505 aa13.68□□□□□ -0.22
SCARF1-206ENST00000573852 IGLV5-39A0A0G2JS06 123 aa13.68□□□□□ -0.22
SCARF1-206ENST00000573852 GAGE2BQ13066 116 aa13.68□□□□□ -0.22
SCARF1-206ENST00000573852 GAGE2EQ4V326 116 aa13.68□□□□□ -0.22
SCARF1-206ENST00000573852 GAGE2DQ9UEU5 116 aa13.68□□□□□ -0.22
SCARF1-206ENST00000573852 A0A0U1RRA0 63 aa13.67□□□□□ -0.22
SCARF1-206ENST00000573852 NHLRC4P0CG21 123 aaPredicted RBP13.67□□□□□ -0.22
SCARF1-206ENST00000573852 LINC00308Q8TCZ7 52 aa13.67□□□□□ -0.22
SCARF1-206ENST00000573852 HERVK_113P63121 156 aa13.66□□□□□ -0.22
SCARF1-206ENST00000573852 CIRBPQ14011 172 aaKnown RBP13.66□□□□□ -0.22
SCARF1-206ENST00000573852 ODF3L2Q3SX64 289 aa13.66□□□□□ -0.22
SCARF1-206ENST00000573852 C1orf158Q8N1D5 194 aa13.66□□□□□ -0.22
SCARF1-206ENST00000573852 TRGV1A0A0A0MS02 117 aa13.66□□□□□ -0.22
SCARF1-206ENST00000573852 C15orf53Q8NAA6 179 aa13.66□□□□□ -0.22
SCARF1-206ENST00000573852 PTPN13Q12923 2485 aa13.65□□□□□ -0.22
SCARF1-206ENST00000573852 NTM-AS1Q6ZSK4 140 aa13.65□□□□□ -0.22
SCARF1-206ENST00000573852 CUBNO60494 3623 aa13.64□□□□□ -0.23
SCARF1-206ENST00000573852 GAGE5Q13069 117 aa13.64□□□□□ -0.23
SCARF1-206ENST00000573852 GAGE6Q13070 117 aa13.64□□□□□ -0.23
SCARF1-206ENST00000573852 SMIM1B2RUZ4 78 aa13.64□□□□□ -0.23
SCARF1-206ENST00000573852 SOSTDC1Q6X4U4 206 aa13.64□□□□□ -0.23
SCARF1-206ENST00000573852 IL17DQ8TAD2 202 aa13.64□□□□□ -0.23
SCARF1-206ENST00000573852 LRRK2Q5S007 2527 aa13.63□□□□□ -0.23
SCARF1-206ENST00000573852 TRAV13-1A0A0B4J241 112 aa13.63□□□□□ -0.23
SCARF1-206ENST00000573852 NDUFV3P56181 108 aaKnown RBP13.63□□□□□ -0.23
SCARF1-206ENST00000573852 WNK1Q9H4A3 2382 aa13.63□□□□□ -0.23
SCARF1-206ENST00000573852 ABCA12Q86UK0 2595 aa13.62□□□□□ -0.23
SCARF1-206ENST00000573852 KRTAP10-9P60411 292 aa13.62□□□□□ -0.23
SCARF1-206ENST00000573852 Q6ZTI0 123 aa13.62□□□□□ -0.23
SCARF1-206ENST00000573852 FAM19A3Q7Z5A8 133 aa13.62□□□□□ -0.23
SCARF1-206ENST00000573852 STHQ8IWL8 128 aa13.62□□□□□ -0.23
SCARF1-206ENST00000573852 DEFB121Q5J5C9 76 aa13.61□□□□□ -0.23
SCARF1-206ENST00000573852 EPG5Q9HCE0 2579 aa13.61□□□□□ -0.23
SCARF1-206ENST00000573852 NAV2Q8IVL1 2488 aa13.61□□□□□ -0.23
SCARF1-206ENST00000573852 K7EQD1 137 aa13.6□□□□□ -0.23
SCARF1-206ENST00000573852 RPL36AP83881 106 aaKnown RBP13.6□□□□□ -0.23
SCARF1-206ENST00000573852 TTC32Q5I0X7 151 aa13.6□□□□□ -0.23
SCARF1-206ENST00000573852 RPL36ALQ969Q0 106 aaKnown RBP13.6□□□□□ -0.23
SCARF1-206ENST00000573852 Q6Q795 121 aa13.6□□□□□ -0.23
SCARF1-206ENST00000573852 TLN2Q9Y4G6 2542 aa13.6□□□□□ -0.23
SCARF1-206ENST00000573852 CSDC2Q9Y534 153 aaKnown RBP13.59□□□□□ -0.23
SCARF1-206ENST00000573852 ZNF469Q96JG9 3925 aaPredicted RBP13.59□□□□□ -0.23
SCARF1-206ENST00000573852 PRIMA1Q86XR5 153 aa13.59□□□□□ -0.23
SCARF1-206ENST00000573852 C2CD3Q4AC94 2353 aa13.59□□□□□ -0.23
SCARF1-206ENST00000573852 F5H768 121 aa13.58□□□□□ -0.23
SCARF1-206ENST00000573852 CDC42SE2Q9NRR3 84 aa13.58□□□□□ -0.23
SCARF1-206ENST00000573852 NOTCH3Q9UM47 2321 aa13.58□□□□□ -0.24
SCARF1-206ENST00000573852 GAGE12JA6NER3 117 aa13.58□□□□□ -0.24
SCARF1-206ENST00000573852 CCDC179H3BU77 68 aa13.58□□□□□ -0.24
SCARF1-206ENST00000573852 GAGE4Q13068 117 aa13.58□□□□□ -0.24
SCARF1-206ENST00000573852 TRBV10-1A0A0K0K1A3 114 aa13.57□□□□□ -0.24
SCARF1-206ENST00000573852 MEIG1Q5JSS6 88 aa13.57□□□□□ -0.24
SCARF1-206ENST00000573852 C11orf44Q8N8P7 122 aa13.57□□□□□ -0.24
SCARF1-206ENST00000573852 ZFYVE26Q68DK2 2539 aa13.57□□□□□ -0.24
SCARF1-206ENST00000573852 COX7A2LO14548 114 aa13.57□□□□□ -0.24
SCARF1-206ENST00000573852 DAZ2Q13117 558 aaKnown RBP13.57□□□□□ -0.24
SCARF1-206ENST00000573852 SHISA2Q6UWI4 295 aa13.57□□□□□ -0.24
SCARF1-206ENST00000573852 DAZ4Q86SG3 579 aaKnown RBP13.57□□□□□ -0.24
SCARF1-206ENST00000573852 DAZ3Q9NR90 486 aaKnown RBP13.57□□□□□ -0.24
SCARF1-206ENST00000573852 NF1P21359 2839 aa13.57□□□□□ -0.24
SCARF1-206ENST00000573852 ZNF462Q96JM2 2506 aa13.56□□□□□ -0.24
SCARF1-206ENST00000573852 FAM240AA0A1B0GVK7 77 aa13.56□□□□□ -0.24
SCARF1-206ENST00000573852 Q96MF0 132 aa13.56□□□□□ -0.24
SCARF1-206ENST00000573852 A0A1W2PRX2 142 aa13.56□□□□□ -0.24
SCARF1-206ENST00000573852 PRB1P04280 392 aa13.56□□□□□ -0.24
SCARF1-206ENST00000573852 NIPBLQ6KC79 2804 aaeCLIP13.55□□□□□ -0.24
SCARF1-206ENST00000573852 TRAV25A0A0B4J276 109 aa13.54□□□□□ -0.24
SCARF1-206ENST00000573852 NOP10Q9NPE3 64 aaKnown RBP13.54□□□□□ -0.24
SCARF1-206ENST00000573852 MRPL23Q16540 153 aaKnown RBP13.54□□□□□ -0.24
SCARF1-206ENST00000573852 SONP18583 2426 aaKnown RBP13.53□□□□□ -0.24
SCARF1-206ENST00000573852 COPS9Q8WXC6 57 aa13.53□□□□□ -0.24
SCARF1-206ENST00000573852 DEFB113Q30KQ7 82 aa13.52□□□□□ -0.25
SCARF1-206ENST00000573852 SETXQ7Z333 2677 aaKnown RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms