RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 SPATA25Q9BR10 227 aa8.09□□□□□ -1.12
RPAIN-212ENST00000573126 GEMIN7Q9H840 131 aaKnown RBP8.09□□□□□ -1.12
RPAIN-212ENST00000573126 ERG28Q9UKR5 140 aa8.09□□□□□ -1.12
RPAIN-212ENST00000573126 A0A0B4J2C4 111 aa8.08□□□□□ -1.12
RPAIN-212ENST00000573126 CCL24O00175 119 aa8.08□□□□□ -1.12
RPAIN-212ENST00000573126 CDKN2A-AS1Q9UH64 79 aa8.08□□□□□ -1.12
RPAIN-212ENST00000573126 DGAT2L7PQ6IED9 249 aa8.08□□□□□ -1.12
RPAIN-212ENST00000573126 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.08□□□□□ -1.12
RPAIN-212ENST00000573126 Q6ZTI0 123 aa8.07□□□□□ -1.12
RPAIN-212ENST00000573126 DNAJC30Q96LL9 226 aa8.07□□□□□ -1.12
RPAIN-212ENST00000573126 TEN1Q86WV5 123 aa8.07□□□□□ -1.12
RPAIN-212ENST00000573126 DAND5Q8N907 189 aa8.07□□□□□ -1.12
RPAIN-212ENST00000573126 CITED2Q99967 270 aaPredicted RBP8.07□□□□□ -1.12
RPAIN-212ENST00000573126 TENM4Q6N022 2769 aa8.07□□□□□ -1.12
RPAIN-212ENST00000573126 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.06□□□□□ -1.12
RPAIN-212ENST00000573126 NDUFA7O95182 113 aa8.06□□□□□ -1.12
RPAIN-212ENST00000573126 LINC00694P0DN24 101 aa8.06□□□□□ -1.12
RPAIN-212ENST00000573126 FHL3Q13643 280 aa8.06□□□□□ -1.12
RPAIN-212ENST00000573126 TMEM86BQ8N661 226 aa8.06□□□□□ -1.12
RPAIN-212ENST00000573126 ATP6V0E2Q8NHE4 81 aa8.06□□□□□ -1.12
RPAIN-212ENST00000573126 C9JAW5 83 aa8.06□□□□□ -1.12
RPAIN-212ENST00000573126 CARD19Q96LW7 228 aa8.06□□□□□ -1.12
RPAIN-212ENST00000573126 WFDC10AQ9H1F0 79 aa8.06□□□□□ -1.12
RPAIN-212ENST00000573126 COX6A2Q02221 97 aa8.05□□□□□ -1.12
RPAIN-212ENST00000573126 ANKRD29Q8N6D5 301 aa8.05□□□□□ -1.12
RPAIN-212ENST00000573126 ITPR2Q14571 2701 aa8.04□□□□□ -1.12
RPAIN-212ENST00000573126 SLC25A20O43772 301 aa8.04□□□□□ -1.12
RPAIN-212ENST00000573126 CIDEAO60543 219 aa8.04□□□□□ -1.12
RPAIN-212ENST00000573126 ZFAND6Q6FIF0 208 aa8.04□□□□□ -1.12
RPAIN-212ENST00000573126 TRAV25A0A0B4J276 109 aa8.04□□□□□ -1.12
RPAIN-212ENST00000573126 TRIAP1O43715 76 aa8.04□□□□□ -1.12
RPAIN-212ENST00000573126 MIAQ16674 131 aa8.04□□□□□ -1.12
RPAIN-212ENST00000573126 PPDPFLQ8WWR9 84 aa8.04□□□□□ -1.12
RPAIN-212ENST00000573126 NOP10Q9NPE3 64 aaKnown RBP8.04□□□□□ -1.12
RPAIN-212ENST00000573126 TRAV13-1A0A0B4J241 112 aa8.03□□□□□ -1.12
RPAIN-212ENST00000573126 SBSPONQ8IVN8 264 aa8.03□□□□□ -1.12
RPAIN-212ENST00000573126 IL17DQ8TAD2 202 aa8.03□□□□□ -1.12
RPAIN-212ENST00000573126 TMEM101Q96IK0 257 aa8.03□□□□□ -1.12
RPAIN-212ENST00000573126 CLUHP3Q96NS8 147 aa8.03□□□□□ -1.12
RPAIN-212ENST00000573126 GAGE12JA6NER3 117 aa8.03□□□□□ -1.12
RPAIN-212ENST00000573126 K7EQD1 137 aa8.03□□□□□ -1.12
RPAIN-212ENST00000573126 RPL36AP83881 106 aaKnown RBP8.03□□□□□ -1.12
RPAIN-212ENST00000573126 GAGE4Q13068 117 aa8.03□□□□□ -1.12
RPAIN-212ENST00000573126 GAGE5Q13069 117 aa8.03□□□□□ -1.12
RPAIN-212ENST00000573126 NTM-AS1Q6ZSK4 140 aa8.03□□□□□ -1.12
RPAIN-212ENST00000573126 RPL36ALQ969Q0 106 aaKnown RBP8.03□□□□□ -1.12
RPAIN-212ENST00000573126 ZNF625Q96I27 306 aaPredicted RBP8.03□□□□□ -1.12
RPAIN-212ENST00000573126 SPANXDQ9BXN6 97 aa8.03□□□□□ -1.12
RPAIN-212ENST00000573126 CDIP1Q9H305 208 aa8.03□□□□□ -1.12
RPAIN-212ENST00000573126 SPANXCQ9NY87 97 aa8.03□□□□□ -1.12
RPAIN-212ENST00000573126 A0A0U1RRA0 63 aa8.02□□□□□ -1.12
RPAIN-212ENST00000573126 LINC00242Q5T6M2 205 aa8.02□□□□□ -1.12
RPAIN-212ENST00000573126 LINC01006Q8NI28 216 aa8.02□□□□□ -1.13
RPAIN-212ENST00000573126 GIG44P09565 113 aaPredicted RBP8.01□□□□□ -1.13
RPAIN-212ENST00000573126 RPL35AP18077 110 aaKnown RBP8.01□□□□□ -1.13
RPAIN-212ENST00000573126 IGLV5-45A0A087WSX0 123 aa8.01□□□□□ -1.13
RPAIN-212ENST00000573126 TIRAPP58753 221 aa8.01□□□□□ -1.13
RPAIN-212ENST00000573126 Q9H8V8 135 aa8.01□□□□□ -1.13
RPAIN-212ENST00000573126 ATXN8Q156A1 80 aa8.01□□□□□ -1.13
RPAIN-212ENST00000573126 FN1P02751 2386 aaKnown RBP8.01□□□□□ -1.13
RPAIN-212ENST00000573126 TRBV30A0A0K0K1B3 111 aa8□□□□□ -1.13
RPAIN-212ENST00000573126 GAGE7O76087 117 aa8□□□□□ -1.13
RPAIN-212ENST00000573126 GAGE12FP0CL80 117 aa8□□□□□ -1.13
RPAIN-212ENST00000573126 GAGE12GP0CL81 117 aa8□□□□□ -1.13
RPAIN-212ENST00000573126 GAGE12IP0CL82 117 aa8□□□□□ -1.13
RPAIN-212ENST00000573126 PLA2G2AP14555 144 aa8□□□□□ -1.13
RPAIN-212ENST00000573126 LINC01620Q4KN68 170 aa8□□□□□ -1.13
RPAIN-212ENST00000573126 ICOSQ9Y6W8 199 aa8□□□□□ -1.13
RPAIN-212ENST00000573126 FASNP49327 2511 aaKnown RBP8□□□□□ -1.13
RPAIN-212ENST00000573126 TRGV2A0A075B6R0 118 aa8□□□□□ -1.13
RPAIN-212ENST00000573126 TRAV4A0A0B4J268 109 aa8□□□□□ -1.13
RPAIN-212ENST00000573126 NDUFA1O15239 70 aa8□□□□□ -1.13
RPAIN-212ENST00000573126 HERVK_113P63121 156 aa8□□□□□ -1.13
RPAIN-212ENST00000573126 YAE1D1Q9NRH1 226 aa8□□□□□ -1.13
RPAIN-212ENST00000573126 PDZD2O15018 2839 aa7.99□□□□□ -1.13
RPAIN-212ENST00000573126 TRBV10-1A0A0K0K1A3 114 aa7.99□□□□□ -1.13
RPAIN-212ENST00000573126 LOC100131303A0A0U1RQF7 123 aa7.99□□□□□ -1.13
RPAIN-212ENST00000573126 MT-ATP8P03928 68 aa7.99□□□□□ -1.13
RPAIN-212ENST00000573126 SCGB1A1P11684 91 aa7.99□□□□□ -1.13
RPAIN-212ENST00000573126 XGP55808 180 aa7.99□□□□□ -1.13
RPAIN-212ENST00000573126 DAZ2Q13117 558 aaKnown RBP7.99□□□□□ -1.13
RPAIN-212ENST00000573126 DAZ4Q86SG3 579 aaKnown RBP7.99□□□□□ -1.13
RPAIN-212ENST00000573126 DAZ3Q9NR90 486 aaKnown RBP7.99□□□□□ -1.13
RPAIN-212ENST00000573126 TEX29Q8N6K0 151 aa7.99□□□□□ -1.13
RPAIN-212ENST00000573126 PLAC8L1A1L4L8 177 aa7.98□□□□□ -1.13
RPAIN-212ENST00000573126 SMIM1B2RUZ4 78 aa7.98□□□□□ -1.13
RPAIN-212ENST00000573126 RPL13AP40429 203 aaKnown RBP7.98□□□□□ -1.13
RPAIN-212ENST00000573126 KRTAP1-1Q07627 177 aa7.98□□□□□ -1.13
RPAIN-212ENST00000573126 NTN5Q8WTR8 489 aaPredicted RBP7.98□□□□□ -1.13
RPAIN-212ENST00000573126 CLEC2BQ92478 149 aa7.98□□□□□ -1.13
RPAIN-212ENST00000573126 IGLV5-39A0A0G2JS06 123 aa7.98□□□□□ -1.13
RPAIN-212ENST00000573126 CDC42SE2Q9NRR3 84 aa7.98□□□□□ -1.13
RPAIN-212ENST00000573126 GCN1Q92616 2671 aaKnown RBP7.97□□□□□ -1.13
RPAIN-212ENST00000573126 HELZ2Q9BYK8 2649 aaKnown RBP7.97□□□□□ -1.13
RPAIN-212ENST00000573126 TEX49A0A1B0GTD5 131 aa7.97□□□□□ -1.13
RPAIN-212ENST00000573126 TIMM17BO60830 172 aa7.97□□□□□ -1.13
RPAIN-212ENST00000573126 CIRBPQ14011 172 aaKnown RBP7.97□□□□□ -1.13
RPAIN-212ENST00000573126 UBE2L6O14933 153 aa7.96□□□□□ -1.13
RPAIN-212ENST00000573126 C19orf73Q9NVV2 129 aa7.96□□□□□ -1.13
RPAIN-212ENST00000573126 CSDC2Q9Y534 153 aaKnown RBP7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms