RNA–Protein interactions for RNA: ENST00000571263.2

CDRT1-206, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best)

Gene CDRT1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-206ENST00000571263 C2orf88Q9BSF0 95 aa8.19□□□□□ -1.1
CDRT1-206ENST00000571263 CDC42SE2Q9NRR3 84 aa8.19□□□□□ -1.1
CDRT1-206ENST00000571263 MEGF8Q7Z7M0 2845 aa8.19□□□□□ -1.1
CDRT1-206ENST00000571263 IGLV4-3A0A075B6K6 122 aa8.18□□□□□ -1.1
CDRT1-206ENST00000571263 TRAV9-2A0A087WT02 112 aa8.18□□□□□ -1.1
CDRT1-206ENST00000571263 KRTDAPP60985 99 aa8.18□□□□□ -1.1
CDRT1-206ENST00000571263 TENM3Q9P273 2699 aa8.17□□□□□ -1.1
CDRT1-206ENST00000571263 SIVA1O15304 175 aa8.17□□□□□ -1.1
CDRT1-206ENST00000571263 C3orf79P0CE67 100 aa8.17□□□□□ -1.1
CDRT1-206ENST00000571263 RBX1P62877 108 aa8.17□□□□□ -1.1
CDRT1-206ENST00000571263 SEC11AP67812 179 aa8.17□□□□□ -1.1
CDRT1-206ENST00000571263 UBE2DNLQ8IWF7 75 aa8.17□□□□□ -1.1
CDRT1-206ENST00000571263 BAALCQ8WXS3 180 aa8.17□□□□□ -1.1
CDRT1-206ENST00000571263 AMELXQ99217 191 aa8.17□□□□□ -1.1
CDRT1-206ENST00000571263 LINC00588Q9Y4M8 146 aa8.17□□□□□ -1.1
CDRT1-206ENST00000571263 DNAH10OSP0CZ25 163 aa8.16□□□□□ -1.1
CDRT1-206ENST00000571263 LINC01556Q5JQF7 62 aa8.16□□□□□ -1.1
CDRT1-206ENST00000571263 LGALS9CQ6DKI2 356 aa8.16□□□□□ -1.1
CDRT1-206ENST00000571263 LINC00173Q6ZV60 143 aa8.16□□□□□ -1.1
CDRT1-206ENST00000571263 CST9LQ9H4G1 147 aa8.16□□□□□ -1.1
CDRT1-206ENST00000571263 MPV17L2Q567V2 206 aa8.15□□□□□ -1.1
CDRT1-206ENST00000571263 ZFAND6Q6FIF0 208 aa8.15□□□□□ -1.1
CDRT1-206ENST00000571263 C10orf126Q8N4M7 172 aa8.15□□□□□ -1.1
CDRT1-206ENST00000571263 PRSS29PA6NIE9 313 aa8.14□□□□□ -1.11
CDRT1-206ENST00000571263 F8VRH5 84 aa8.14□□□□□ -1.11
CDRT1-206ENST00000571263 ANGP03950 147 aaKnown RBP8.14□□□□□ -1.11
CDRT1-206ENST00000571263 JOSD1Q15040 202 aaPredicted RBP8.14□□□□□ -1.11
CDRT1-206ENST00000571263 LINC01545Q5VT33 79 aa8.14□□□□□ -1.11
CDRT1-206ENST00000571263 Q6ZUT4 128 aa8.14□□□□□ -1.11
CDRT1-206ENST00000571263 WFDC10BQ8IUB3 73 aa8.14□□□□□ -1.11
CDRT1-206ENST00000571263 Q8N976 141 aa8.14□□□□□ -1.11
CDRT1-206ENST00000571263 Q9H8V8 135 aa8.14□□□□□ -1.11
CDRT1-206ENST00000571263 CHTOPQ9Y3Y2 248 aaKnown RBP8.14□□□□□ -1.11
CDRT1-206ENST00000571263 IGLV4-60A0A075B6I1 120 aa8.13□□□□□ -1.11
CDRT1-206ENST00000571263 SCGB1D1O95968 90 aa8.13□□□□□ -1.11
CDRT1-206ENST00000571263 PLNP26678 52 aa8.13□□□□□ -1.11
CDRT1-206ENST00000571263 SS18Q15532 418 aa8.13□□□□□ -1.11
CDRT1-206ENST00000571263 FAM19A3Q7Z5A8 133 aa8.13□□□□□ -1.11
CDRT1-206ENST00000571263 TRAV8-4A0A0B4J246 113 aa8.12□□□□□ -1.11
CDRT1-206ENST00000571263 H0Y8G0 127 aa8.12□□□□□ -1.11
CDRT1-206ENST00000571263 DPM2O94777 84 aa8.12□□□□□ -1.11
CDRT1-206ENST00000571263 CRPP02741 224 aa8.12□□□□□ -1.11
CDRT1-206ENST00000571263 ODF1Q14990 250 aa8.12□□□□□ -1.11
CDRT1-206ENST00000571263 CASC10Q5T4H9 136 aa8.12□□□□□ -1.11
CDRT1-206ENST00000571263 FAM104AQ969W3 186 aa8.12□□□□□ -1.11
CDRT1-206ENST00000571263 OPRPNQ99935 248 aaPredicted RBP8.12□□□□□ -1.11
CDRT1-206ENST00000571263 PRR34Q9NV39 138 aa8.12□□□□□ -1.11
CDRT1-206ENST00000571263 TINCRA0A1B0GVN0 87 aa8.11□□□□□ -1.11
CDRT1-206ENST00000571263 IGHV3-30P01768 117 aa8.11□□□□□ -1.11
CDRT1-206ENST00000571263 IGHV3-33P01772 117 aa8.11□□□□□ -1.11
CDRT1-206ENST00000571263 IGHV3-30-3P0DP02 117 aa8.11□□□□□ -1.11
CDRT1-206ENST00000571263 IGHV3-30-5P0DP03 117 aa8.11□□□□□ -1.11
CDRT1-206ENST00000571263 UBE2D1P51668 147 aa8.11□□□□□ -1.11
CDRT1-206ENST00000571263 HERVK_113P63121 156 aa8.11□□□□□ -1.11
CDRT1-206ENST00000571263 REG3AQ06141 175 aa8.11□□□□□ -1.11
CDRT1-206ENST00000571263 MIAQ16674 131 aa8.11□□□□□ -1.11
CDRT1-206ENST00000571263 NFE4Q86UQ8 179 aa8.11□□□□□ -1.11
CDRT1-206ENST00000571263 LINC00269Q8N2A0 174 aa8.11□□□□□ -1.11
CDRT1-206ENST00000571263 KLK12Q9UKR0 248 aa8.11□□□□□ -1.11
CDRT1-206ENST00000571263 TRAV8-3A0A0A6YYJ7 113 aa8.1□□□□□ -1.11
CDRT1-206ENST00000571263 IGKCP01834 107 aa8.1□□□□□ -1.11
CDRT1-206ENST00000571263 IGLC3P0DOY3 106 aa8.1□□□□□ -1.11
CDRT1-206ENST00000571263 GEMIN7Q9H840 131 aaKnown RBP8.1□□□□□ -1.11
CDRT1-206ENST00000571263 MRPL35Q9NZE8 188 aaKnown RBP8.1□□□□□ -1.11
CDRT1-206ENST00000571263 TRAV13-1A0A0B4J241 112 aa8.09□□□□□ -1.11
CDRT1-206ENST00000571263 LINC00959A0A1B0GUT2 108 aa8.09□□□□□ -1.11
CDRT1-206ENST00000571263 IBA57-AS1B1ANH7 110 aa8.09□□□□□ -1.11
CDRT1-206ENST00000571263 SMIM6P0DI80 62 aa8.09□□□□□ -1.11
CDRT1-206ENST00000571263 TTC32Q5I0X7 151 aa8.09□□□□□ -1.11
CDRT1-206ENST00000571263 RMI2Q96E14 147 aa8.09□□□□□ -1.11
CDRT1-206ENST00000571263 COL7A1Q02388 2944 aa8.09□□□□□ -1.12
CDRT1-206ENST00000571263 HSBP1L1C9JCN9 74 aa8.08□□□□□ -1.12
CDRT1-206ENST00000571263 H3BRM9 83 aa8.08□□□□□ -1.12
CDRT1-206ENST00000571263 RNASE13Q5GAN3 156 aaKnown RBP8.08□□□□□ -1.12
CDRT1-206ENST00000571263 LINC00242Q5T6M2 205 aa8.08□□□□□ -1.12
CDRT1-206ENST00000571263 UBE2WQ96B02 151 aa8.08□□□□□ -1.12
CDRT1-206ENST00000571263 COX11Q9Y6N1 276 aa8.08□□□□□ -1.12
CDRT1-206ENST00000571263 PRKDCP78527 4128 aaKnown RBP8.08□□□□□ -1.12
CDRT1-206ENST00000571263 IGLV4-69A0A075B6H9 119 aa8.07□□□□□ -1.12
CDRT1-206ENST00000571263 A0A0J9YXV3 536 aa8.07□□□□□ -1.12
CDRT1-206ENST00000571263 PYY3Q5JQD4 70 aa8.07□□□□□ -1.12
CDRT1-206ENST00000571263 ZC2HC1BQ5TFG8 222 aa8.07□□□□□ -1.12
CDRT1-206ENST00000571263 LINC01561Q8N1V8 128 aa8.07□□□□□ -1.12
CDRT1-206ENST00000571263 CHAC1Q9BUX1 264 aa8.07□□□□□ -1.12
CDRT1-206ENST00000571263 IGLV5-45A0A087WSX0 123 aa8.06□□□□□ -1.12
CDRT1-206ENST00000571263 IGKV3OR2-268A0A0C4DH90 116 aa8.06□□□□□ -1.12
CDRT1-206ENST00000571263 C11orf86A6NJI1 115 aa8.06□□□□□ -1.12
CDRT1-206ENST00000571263 HERVK_113P61574 105 aa8.06□□□□□ -1.12
CDRT1-206ENST00000571263 S100A12P80511 92 aa8.06□□□□□ -1.12
CDRT1-206ENST00000571263 CD164L2Q6UWJ8 174 aa8.06□□□□□ -1.12
CDRT1-206ENST00000571263 ENHOQ6UWT2 76 aa8.06□□□□□ -1.12
CDRT1-206ENST00000571263 STAB2Q8WWQ8 2551 aa8.06□□□□□ -1.12
CDRT1-206ENST00000571263 CHCHD10Q8WYQ3 142 aaPredicted RBP8.05□□□□□ -1.12
CDRT1-206ENST00000571263 C1orf43Q9BWL3 253 aa8.05□□□□□ -1.12
CDRT1-206ENST00000571263 TM2D2Q9BX73 214 aa8.05□□□□□ -1.12
CDRT1-206ENST00000571263 IGHV3OR16-9A0A0B4J2B5 98 aa8.04□□□□□ -1.12
CDRT1-206ENST00000571263 TMEM170BQ5T4T1 132 aa8.04□□□□□ -1.12
CDRT1-206ENST00000571263 Q8N3U1 123 aa8.04□□□□□ -1.12
CDRT1-206ENST00000571263 LINC00469Q8N7U9 141 aa8.04□□□□□ -1.12
CDRT1-206ENST00000571263 PMCHL2Q9BQD1 86 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms