RNA–Protein interactions for RNA: ENST00000571064.5

UBFD1-210, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 794 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-210ENST00000571064 RAB5AP20339 215 aa14.34□□□□□ -0.11
UBFD1-210ENST00000571064 Q6ZRN7 208 aaPredicted RBP14.34□□□□□ -0.11
UBFD1-210ENST00000571064 PGPEP1Q9NXJ5 209 aa14.34□□□□□ -0.11
UBFD1-210ENST00000571064 ANGP03950 147 aaKnown RBP14.33□□□□□ -0.12
UBFD1-210ENST00000571064 LAGE3Q14657 143 aa14.33□□□□□ -0.12
UBFD1-210ENST00000571064 ENHOQ6UWT2 76 aa14.33□□□□□ -0.12
UBFD1-210ENST00000571064 NXT2Q9NPJ8 142 aaKnown RBP14.33□□□□□ -0.12
UBFD1-210ENST00000571064 SMR3BP02814 79 aaPredicted RBP14.32□□□□□ -0.12
UBFD1-210ENST00000571064 TRGC2P03986 189 aa14.32□□□□□ -0.12
UBFD1-210ENST00000571064 RPL39P62891 51 aaKnown RBP14.32□□□□□ -0.12
UBFD1-210ENST00000571064 RNASEKQ6P5S7 137 aaKnown RBP14.32□□□□□ -0.12
UBFD1-210ENST00000571064 C18orf32Q8TCD1 76 aa14.32□□□□□ -0.12
UBFD1-210ENST00000571064 Q9HAA7 133 aa14.32□□□□□ -0.12
UBFD1-210ENST00000571064 AMMECR1LQ6DCA0 310 aa14.31□□□□□ -0.12
UBFD1-210ENST00000571064 MRPL52Q86TS9 123 aaKnown RBP14.31□□□□□ -0.12
UBFD1-210ENST00000571064 LINC00269Q8N2A0 174 aa14.31□□□□□ -0.12
UBFD1-210ENST00000571064 UBE2WQ96B02 151 aa14.31□□□□□ -0.12
UBFD1-210ENST00000571064 PRR34Q9NV39 138 aa14.31□□□□□ -0.12
UBFD1-210ENST00000571064 KRTAP10-1P60331 282 aa14.3□□□□□ -0.12
UBFD1-210ENST00000571064 PRSS3P2Q8NHM4 247 aa14.3□□□□□ -0.12
UBFD1-210ENST00000571064 URB1-AS1Q96HZ7 61 aa14.3□□□□□ -0.12
UBFD1-210ENST00000571064 UBE2D4Q9Y2X8 147 aa14.3□□□□□ -0.12
UBFD1-210ENST00000571064 VPS13BQ7Z7G8 4022 aa14.29□□□□□ -0.12
UBFD1-210ENST00000571064 LINC01546A6NGU7 62 aa14.29□□□□□ -0.12
UBFD1-210ENST00000571064 CLPSL2Q6UWE3 100 aa14.29□□□□□ -0.12
UBFD1-210ENST00000571064 K7EMI3 77 aa14.28□□□□□ -0.12
UBFD1-210ENST00000571064 ZNF25P17030 456 aaPredicted RBP14.28□□□□□ -0.12
UBFD1-210ENST00000571064 FAM104AQ969W3 186 aa14.28□□□□□ -0.12
UBFD1-210ENST00000571064 SRRM2Q9UQ35 2752 aaKnown RBP14.28□□□□□ -0.12
UBFD1-210ENST00000571064 TRAV8-3A0A0A6YYJ7 113 aa14.27□□□□□ -0.13
UBFD1-210ENST00000571064 J3QL48 77 aa14.27□□□□□ -0.13
UBFD1-210ENST00000571064 CDPF1Q6NVV7 123 aa14.27□□□□□ -0.13
UBFD1-210ENST00000571064 NFE4Q86UQ8 179 aa14.27□□□□□ -0.13
UBFD1-210ENST00000571064 TIMM21Q9BVV7 248 aa14.27□□□□□ -0.13
UBFD1-210ENST00000571064 REG3AQ06141 175 aa14.26□□□□□ -0.13
UBFD1-210ENST00000571064 ORMDL2Q53FV1 153 aa14.26□□□□□ -0.13
UBFD1-210ENST00000571064 OR5A1Q8NGJ0 315 aa14.26□□□□□ -0.13
UBFD1-210ENST00000571064 TMEM18Q96B42 140 aa14.26□□□□□ -0.13
UBFD1-210ENST00000571064 CDC42SE2Q9NRR3 84 aa14.26□□□□□ -0.13
UBFD1-210ENST00000571064 EREGO14944 169 aa14.25□□□□□ -0.13
UBFD1-210ENST00000571064 Q0VG73 95 aa14.25□□□□□ -0.13
UBFD1-210ENST00000571064 TMEM101Q96IK0 257 aa14.25□□□□□ -0.13
UBFD1-210ENST00000571064 CSDC2Q9Y534 153 aaKnown RBP14.25□□□□□ -0.13
UBFD1-210ENST00000571064 CRPP02741 224 aa14.24□□□□□ -0.13
UBFD1-210ENST00000571064 C2orf66Q6UXQ4 117 aa14.24□□□□□ -0.13
UBFD1-210ENST00000571064 FA2HQ7L5A8 372 aa14.24□□□□□ -0.13
UBFD1-210ENST00000571064 HAMPP81172 84 aa14.23□□□□□ -0.13
UBFD1-210ENST00000571064 MIAQ16674 131 aa14.23□□□□□ -0.13
UBFD1-210ENST00000571064 KRTAP26-1Q6PEX3 210 aa14.23□□□□□ -0.13
UBFD1-210ENST00000571064 Q6ZUT4 128 aa14.23□□□□□ -0.13
UBFD1-210ENST00000571064 ZNF664Q8N3J9 261 aa14.23□□□□□ -0.13
UBFD1-210ENST00000571064 OPRPNQ99935 248 aaPredicted RBP14.23□□□□□ -0.13
UBFD1-210ENST00000571064 LINC00614P0C842 121 aa14.22□□□□□ -0.13
UBFD1-210ENST00000571064 RNASE13Q5GAN3 156 aaKnown RBP14.22□□□□□ -0.13
UBFD1-210ENST00000571064 DGAT2L7PQ6IED9 249 aa14.22□□□□□ -0.13
UBFD1-210ENST00000571064 SPANXA1Q9NS26 97 aa14.22□□□□□ -0.13
UBFD1-210ENST00000571064 IGKV2D-24A0A075B6R9 120 aa14.21□□□□□ -0.13
UBFD1-210ENST00000571064 FAM229AH3BQW9 127 aa14.21□□□□□ -0.13
UBFD1-210ENST00000571064 SMAGPQ0VAQ4 97 aa14.21□□□□□ -0.13
UBFD1-210ENST00000571064 CYSLTR1Q9Y271 337 aa14.21□□□□□ -0.13
UBFD1-210ENST00000571064 IGKV3OR2-268A0A0C4DH90 116 aa14.2□□□□□ -0.14
UBFD1-210ENST00000571064 TOMM6Q96B49 74 aa14.2□□□□□ -0.14
UBFD1-210ENST00000571064 PYGO1Q9Y3Y4 419 aa14.2□□□□□ -0.14
UBFD1-210ENST00000571064 IGLV10-54A0A075B6I4 117 aa14.19□□□□□ -0.14
UBFD1-210ENST00000571064 A0A096LNJ9 63 aa14.19□□□□□ -0.14
UBFD1-210ENST00000571064 IGIPA6NJ69 53 aa14.19□□□□□ -0.14
UBFD1-210ENST00000571064 MRPS36P82909 103 aaKnown RBP14.19□□□□□ -0.14
UBFD1-210ENST00000571064 RMI2Q96E14 147 aa14.19□□□□□ -0.14
UBFD1-210ENST00000571064 TM2D2Q9BX73 214 aa14.19□□□□□ -0.14
UBFD1-210ENST00000571064 AP5S1Q9NUS5 200 aa14.19□□□□□ -0.14
UBFD1-210ENST00000571064 IGLV4-3A0A075B6K6 122 aa14.18□□□□□ -0.14
UBFD1-210ENST00000571064 C1orf43Q9BWL3 253 aa14.18□□□□□ -0.14
UBFD1-210ENST00000571064 A0A087WTM6 91 aa14.17□□□□□ -0.14
UBFD1-210ENST00000571064 TRAV8-4A0A0B4J246 113 aa14.17□□□□□ -0.14
UBFD1-210ENST00000571064 LINC00959A0A1B0GUT2 108 aa14.17□□□□□ -0.14
UBFD1-210ENST00000571064 LRCOL1A6NCL2 159 aa14.17□□□□□ -0.14
UBFD1-210ENST00000571064 RAB5BP61020 215 aa14.17□□□□□ -0.14
UBFD1-210ENST00000571064 PSCAO43653 123 aa14.16□□□□□ -0.14
UBFD1-210ENST00000571064 LINC00310P59036 64 aa14.16□□□□□ -0.14
UBFD1-210ENST00000571064 WFDC2Q14508 124 aa14.16□□□□□ -0.14
UBFD1-210ENST00000571064 PMCHL1Q16048 86 aa14.16□□□□□ -0.14
UBFD1-210ENST00000571064 G0S2P27469 103 aa14.15□□□□□ -0.14
UBFD1-210ENST00000571064 ZC2HC1BQ5TFG8 222 aa14.15□□□□□ -0.14
UBFD1-210ENST00000571064 BAGE3Q86Y29 109 aa14.15□□□□□ -0.14
UBFD1-210ENST00000571064 COX11Q9Y6N1 276 aa14.15□□□□□ -0.14
UBFD1-210ENST00000571064 UBR4Q5T4S7 5183 aa14.15□□□□□ -0.14
UBFD1-210ENST00000571064 GCSHP23434 173 aa14.14□□□□□ -0.15
UBFD1-210ENST00000571064 BAALCQ8WXS3 180 aa14.14□□□□□ -0.15
UBFD1-210ENST00000571064 CHCHD10Q8WYQ3 142 aaPredicted RBP14.14□□□□□ -0.15
UBFD1-210ENST00000571064 CHCHD1Q96BP2 118 aaKnown RBP14.14□□□□□ -0.15
UBFD1-210ENST00000571064 HIST1H2BKO60814 126 aa14.13□□□□□ -0.15
UBFD1-210ENST00000571064 HIST1H2BJP06899 126 aa14.13□□□□□ -0.15
UBFD1-210ENST00000571064 HIST1H2BOP23527 126 aa14.13□□□□□ -0.15
UBFD1-210ENST00000571064 HIST1H2BBP33778 126 aa14.13□□□□□ -0.15
UBFD1-210ENST00000571064 HIST1H2BDP58876 126 aa14.13□□□□□ -0.15
UBFD1-210ENST00000571064 HIST1H2BCP62807 126 aa14.13□□□□□ -0.15
UBFD1-210ENST00000571064 HIST2H2BEQ16778 126 aa14.13□□□□□ -0.15
UBFD1-210ENST00000571064 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.13□□□□□ -0.15
UBFD1-210ENST00000571064 LINC00173Q6ZV60 143 aa14.13□□□□□ -0.15
UBFD1-210ENST00000571064 HIST1H2BHQ93079 126 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 114.6 ms