RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 IGHV3-30P01768 117 aa10.52□□□□□ -0.73
HERPUD1-219ENST00000570273 IGHV3-33P01772 117 aa10.52□□□□□ -0.73
HERPUD1-219ENST00000570273 IGHV3-30-3P0DP02 117 aa10.52□□□□□ -0.73
HERPUD1-219ENST00000570273 IGHV3-30-5P0DP03 117 aa10.52□□□□□ -0.73
HERPUD1-219ENST00000570273 RNASE13Q5GAN3 156 aaKnown RBP10.52□□□□□ -0.73
HERPUD1-219ENST00000570273 CASC10Q5T4H9 136 aa10.52□□□□□ -0.73
HERPUD1-219ENST00000570273 UPK3BQ9BT76 320 aa10.52□□□□□ -0.73
HERPUD1-219ENST00000570273 CSDC2Q9Y534 153 aaKnown RBP10.52□□□□□ -0.73
HERPUD1-219ENST00000570273 A0A1B0GUV1 79 aa10.51□□□□□ -0.73
HERPUD1-219ENST00000570273 H0Y8G0 127 aa10.51□□□□□ -0.73
HERPUD1-219ENST00000570273 NPSP0C0P6 89 aa10.51□□□□□ -0.73
HERPUD1-219ENST00000570273 KRTDAPP60985 99 aa10.51□□□□□ -0.73
HERPUD1-219ENST00000570273 MRPS36P82909 103 aaKnown RBP10.51□□□□□ -0.73
HERPUD1-219ENST00000570273 PAPPA-AS1Q5QFB9 102 aa10.51□□□□□ -0.73
HERPUD1-219ENST00000570273 BAALCQ8WXS3 180 aa10.51□□□□□ -0.73
HERPUD1-219ENST00000570273 MAP1LC3CQ9BXW4 147 aa10.51□□□□□ -0.73
HERPUD1-219ENST00000570273 SIVA1O15304 175 aa10.5□□□□□ -0.73
HERPUD1-219ENST00000570273 PRSS1P07477 247 aa10.5□□□□□ -0.73
HERPUD1-219ENST00000570273 ZNF664Q8N3J9 261 aa10.5□□□□□ -0.73
HERPUD1-219ENST00000570273 OR10D4PQ8NGN7 298 aa10.5□□□□□ -0.73
HERPUD1-219ENST00000570273 CDC42SE2Q9NRR3 84 aa10.5□□□□□ -0.73
HERPUD1-219ENST00000570273 ANGP03950 147 aaKnown RBP10.5□□□□□ -0.73
HERPUD1-219ENST00000570273 C3orf79P0CE67 100 aa10.5□□□□□ -0.73
HERPUD1-219ENST00000570273 LINC01556Q5JQF7 62 aa10.5□□□□□ -0.73
HERPUD1-219ENST00000570273 ZC2HC1BQ5TFG8 222 aa10.5□□□□□ -0.73
HERPUD1-219ENST00000570273 TEX43Q6ZNM6 134 aa10.5□□□□□ -0.73
HERPUD1-219ENST00000570273 FAM104AQ969W3 186 aa10.5□□□□□ -0.73
HERPUD1-219ENST00000570273 VCX2Q9H322 139 aa10.5□□□□□ -0.73
HERPUD1-219ENST00000570273 DNAH10OSP0CZ25 163 aa10.49□□□□□ -0.73
HERPUD1-219ENST00000570273 TENM2Q9NT68 2774 aa10.48□□□□□ -0.73
HERPUD1-219ENST00000570273 SYS1-DBNDD2H3BUS1 97 aa10.48□□□□□ -0.73
HERPUD1-219ENST00000570273 PMVKQ15126 192 aa10.48□□□□□ -0.73
HERPUD1-219ENST00000570273 CLPSL2Q6UWE3 100 aa10.48□□□□□ -0.73
HERPUD1-219ENST00000570273 AMELXQ99217 191 aa10.48□□□□□ -0.73
HERPUD1-219ENST00000570273 C2orf88Q9BSF0 95 aa10.48□□□□□ -0.73
HERPUD1-219ENST00000570273 IGKV3OR2-268A0A0C4DH90 116 aa10.47□□□□□ -0.73
HERPUD1-219ENST00000570273 AKR1D1P51857 326 aa10.47□□□□□ -0.73
HERPUD1-219ENST00000570273 CST9LQ9H4G1 147 aa10.47□□□□□ -0.73
HERPUD1-219ENST00000570273 Q9H8V8 135 aa10.47□□□□□ -0.73
HERPUD1-219ENST00000570273 KLK12Q9UKR0 248 aa10.47□□□□□ -0.73
HERPUD1-219ENST00000570273 KMT2CQ8NEZ4 4911 aaKnown RBP10.46□□□□□ -0.73
HERPUD1-219ENST00000570273 TRAV12-1A0A0B4J245 112 aa10.46□□□□□ -0.74
HERPUD1-219ENST00000570273 PRSS29PA6NIE9 313 aa10.46□□□□□ -0.74
HERPUD1-219ENST00000570273 PET117Q6UWS5 81 aa10.46□□□□□ -0.74
HERPUD1-219ENST00000570273 LINC00269Q8N2A0 174 aa10.46□□□□□ -0.74
HERPUD1-219ENST00000570273 PLECQ15149 4684 aaKnown RBP10.46□□□□□ -0.74
HERPUD1-219ENST00000570273 TRAV13-1A0A0B4J241 112 aa10.45□□□□□ -0.74
HERPUD1-219ENST00000570273 CRPP02741 224 aa10.45□□□□□ -0.74
HERPUD1-219ENST00000570273 C20orf202A1L168 122 aa10.44□□□□□ -0.74
HERPUD1-219ENST00000570273 REG3AQ06141 175 aa10.44□□□□□ -0.74
HERPUD1-219ENST00000570273 ODF1Q14990 250 aa10.44□□□□□ -0.74
HERPUD1-219ENST00000570273 LGALS9CQ6DKI2 356 aa10.44□□□□□ -0.74
HERPUD1-219ENST00000570273 SPATA12Q7Z6I5 190 aa10.44□□□□□ -0.74
HERPUD1-219ENST00000570273 CHTOPQ9Y3Y2 248 aaKnown RBP10.44□□□□□ -0.74
HERPUD1-219ENST00000570273 LYSTQ99698 3801 aa10.44□□□□□ -0.74
HERPUD1-219ENST00000570273 LOC105371267A0A1B0GV96 52 aa10.43□□□□□ -0.74
HERPUD1-219ENST00000570273 C10orf126Q8N4M7 172 aa10.43□□□□□ -0.74
HERPUD1-219ENST00000570273 UBE2WQ96B02 151 aa10.43□□□□□ -0.74
HERPUD1-219ENST00000570273 PMCHL2Q9BQD1 86 aa10.43□□□□□ -0.74
HERPUD1-219ENST00000570273 UBE2D1P51668 147 aa10.42□□□□□ -0.74
HERPUD1-219ENST00000570273 MRPL35Q9NZE8 188 aaKnown RBP10.42□□□□□ -0.74
HERPUD1-219ENST00000570273 TRAV9-2A0A087WT02 112 aa10.41□□□□□ -0.74
HERPUD1-219ENST00000570273 F8VRH5 84 aa10.41□□□□□ -0.74
HERPUD1-219ENST00000570273 LINC01545Q5VT33 79 aa10.41□□□□□ -0.74
HERPUD1-219ENST00000570273 PRR34Q9NV39 138 aa10.41□□□□□ -0.74
HERPUD1-219ENST00000570273 A0A0J9YXV3 536 aa10.41□□□□□ -0.74
HERPUD1-219ENST00000570273 LINC00959A0A1B0GUT2 108 aa10.41□□□□□ -0.74
HERPUD1-219ENST00000570273 LY6G6CO95867 125 aa10.41□□□□□ -0.74
HERPUD1-219ENST00000570273 SCGB1D1O95968 90 aa10.41□□□□□ -0.74
HERPUD1-219ENST00000570273 SS18Q15532 418 aa10.41□□□□□ -0.74
HERPUD1-219ENST00000570273 ENHOQ6UWT2 76 aa10.41□□□□□ -0.74
HERPUD1-219ENST00000570273 LINC00476Q8WZB0 136 aa10.41□□□□□ -0.74
HERPUD1-219ENST00000570273 IGLV4-69A0A075B6H9 119 aa10.4□□□□□ -0.75
HERPUD1-219ENST00000570273 DPM2O94777 84 aa10.4□□□□□ -0.75
HERPUD1-219ENST00000570273 TTC32Q5I0X7 151 aa10.4□□□□□ -0.75
HERPUD1-219ENST00000570273 CHAC1Q9BUX1 264 aa10.4□□□□□ -0.75
HERPUD1-219ENST00000570273 IGLV10-54A0A075B6I4 117 aa10.39□□□□□ -0.75
HERPUD1-219ENST00000570273 IBA57-AS1B1ANH7 110 aa10.39□□□□□ -0.75
HERPUD1-219ENST00000570273 K7EP13 123 aa10.39□□□□□ -0.75
HERPUD1-219ENST00000570273 IGLC3P0DOY3 106 aa10.39□□□□□ -0.75
HERPUD1-219ENST00000570273 MIAQ16674 131 aa10.39□□□□□ -0.75
HERPUD1-219ENST00000570273 GEMIN7Q9H840 131 aaKnown RBP10.39□□□□□ -0.75
HERPUD1-219ENST00000570273 Q9HAA7 133 aa10.39□□□□□ -0.75
HERPUD1-219ENST00000570273 NBDYA0A0U1RRE5 68 aa10.38□□□□□ -0.75
HERPUD1-219ENST00000570273 TINCRA0A1B0GVN0 87 aa10.38□□□□□ -0.75
HERPUD1-219ENST00000570273 CCL25O15444 150 aa10.38□□□□□ -0.75
HERPUD1-219ENST00000570273 IGKCP01834 107 aa10.38□□□□□ -0.75
HERPUD1-219ENST00000570273 PLNP26678 52 aa10.38□□□□□ -0.75
HERPUD1-219ENST00000570273 SEC11AP67812 179 aa10.38□□□□□ -0.75
HERPUD1-219ENST00000570273 JOSD1Q15040 202 aaPredicted RBP10.38□□□□□ -0.75
HERPUD1-219ENST00000570273 LINC00242Q5T6M2 205 aa10.38□□□□□ -0.75
HERPUD1-219ENST00000570273 KRTAP1-5Q9BYS1 174 aa10.38□□□□□ -0.75
HERPUD1-219ENST00000570273 ALMS1Q8TCU4 4167 aa10.37□□□□□ -0.75
HERPUD1-219ENST00000570273 C11orf86A6NJI1 115 aa10.37□□□□□ -0.75
HERPUD1-219ENST00000570273 XCL1P47992 114 aa10.37□□□□□ -0.75
HERPUD1-219ENST00000570273 NFE4Q86UQ8 179 aa10.37□□□□□ -0.75
HERPUD1-219ENST00000570273 CHCHD10Q8WYQ3 142 aaPredicted RBP10.37□□□□□ -0.75
HERPUD1-219ENST00000570273 SACSQ9NZJ4 4579 aa10.36□□□□□ -0.75
HERPUD1-219ENST00000570273 TRAV8-3A0A0A6YYJ7 113 aa10.36□□□□□ -0.75
HERPUD1-219ENST00000570273 TRAV8-4A0A0B4J246 113 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms