RNA–Protein interactions for RNA: ENST00000569891.5

CYLD-216, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 1 (best)

Gene CYLD, Length 4,665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-216ENST00000569891 NBEAL1Q6ZS30 2694 aa4.34□□□□□ -1.71
CYLD-216ENST00000569891 PAX4O43316 350 aa4.34□□□□□ -1.71
CYLD-216ENST00000569891 MRPL23Q16540 153 aaKnown RBP4.34□□□□□ -1.71
CYLD-216ENST00000569891 NFE4Q86UQ8 179 aa4.34□□□□□ -1.71
CYLD-216ENST00000569891 CSNK1G2-AS1Q8NCQ2 148 aa4.34□□□□□ -1.71
CYLD-216ENST00000569891 RNF183Q96D59 192 aa4.34□□□□□ -1.71
CYLD-216ENST00000569891 UBE2D3P61077 147 aa4.34□□□□□ -1.72
CYLD-216ENST00000569891 UBE2D2P62837 147 aa4.34□□□□□ -1.72
CYLD-216ENST00000569891 GAS8-AS1O95177 125 aa4.33□□□□□ -1.72
CYLD-216ENST00000569891 KRTAP24-1Q3LI83 254 aa4.33□□□□□ -1.72
CYLD-216ENST00000569891 ZNF479Q96JC4 524 aa4.33□□□□□ -1.72
CYLD-216ENST00000569891 TRAV8-6A0A0B4J262 113 aa4.33□□□□□ -1.72
CYLD-216ENST00000569891 NEGR1Q7Z3B1 354 aa4.33□□□□□ -1.72
CYLD-216ENST00000569891 ATP6V0E2Q8NHE4 81 aa4.33□□□□□ -1.72
CYLD-216ENST00000569891 PHLDA1Q8WV24 401 aaPredicted RBP4.33□□□□□ -1.72
CYLD-216ENST00000569891 CHCHD5Q9BSY4 110 aa4.33□□□□□ -1.72
CYLD-216ENST00000569891 TINCRA0A1B0GVN0 87 aa4.33□□□□□ -1.72
CYLD-216ENST00000569891 TMEM238C9JI98 176 aa4.33□□□□□ -1.72
CYLD-216ENST00000569891 LEPROTO15243 131 aa4.33□□□□□ -1.72
CYLD-216ENST00000569891 SRSF9Q13242 221 aaKnown RBP eCLIP4.33□□□□□ -1.72
CYLD-216ENST00000569891 DEFB135Q30KP9 77 aa4.33□□□□□ -1.72
CYLD-216ENST00000569891 C4orf48Q5BLP8 95 aa4.33□□□□□ -1.72
CYLD-216ENST00000569891 SLC25A29Q8N8R3 303 aa4.33□□□□□ -1.72
CYLD-216ENST00000569891 ORAOV1Q8WV07 137 aa4.33□□□□□ -1.72
CYLD-216ENST00000569891 TRAV26-1A0A087WT03 109 aa4.33□□□□□ -1.72
CYLD-216ENST00000569891 MYMXA0A1B0GTQ4 84 aa4.33□□□□□ -1.72
CYLD-216ENST00000569891 IGHV4-30-4P0DP06 118 aa4.33□□□□□ -1.72
CYLD-216ENST00000569891 HIST1H4GQ99525 98 aa4.33□□□□□ -1.72
CYLD-216ENST00000569891 WFDC10AQ9H1F0 79 aa4.33□□□□□ -1.72
CYLD-216ENST00000569891 ICOSQ9Y6W8 199 aa4.33□□□□□ -1.72
CYLD-216ENST00000569891 ZNF815PA8K554 130 aa4.32□□□□□ -1.72
CYLD-216ENST00000569891 TIRAPP58753 221 aa4.32□□□□□ -1.72
CYLD-216ENST00000569891 STPG4Q8N801 248 aa4.32□□□□□ -1.72
CYLD-216ENST00000569891 IGLV4-3A0A075B6K6 122 aa4.32□□□□□ -1.72
CYLD-216ENST00000569891 HINT1P49773 126 aaPredicted RBP4.32□□□□□ -1.72
CYLD-216ENST00000569891 LINC00612Q8N6U2 182 aa4.32□□□□□ -1.72
CYLD-216ENST00000569891 FAM222AQ5U5X8 452 aa4.32□□□□□ -1.72
CYLD-216ENST00000569891 Q6ZVH6 145 aa4.32□□□□□ -1.72
CYLD-216ENST00000569891 LINC00469Q8N7U9 141 aa4.32□□□□□ -1.72
CYLD-216ENST00000569891 AGRNO00468 2067 aa4.32□□□□□ -1.72
CYLD-216ENST00000569891 FGF6P10767 208 aa4.31□□□□□ -1.72
CYLD-216ENST00000569891 RPL39P62891 51 aaKnown RBP4.31□□□□□ -1.72
CYLD-216ENST00000569891 EGFEM1PQ0D2K5 195 aa4.31□□□□□ -1.72
CYLD-216ENST00000569891 SS18Q15532 418 aa4.31□□□□□ -1.72
CYLD-216ENST00000569891 ANKRD39Q53RE8 183 aa4.31□□□□□ -1.72
CYLD-216ENST00000569891 HIST2H2BDQ6DRA6 164 aa4.31□□□□□ -1.72
CYLD-216ENST00000569891 TEP1Q99973 2627 aaKnown RBP4.31□□□□□ -1.72
CYLD-216ENST00000569891 SNCGO76070 127 aa4.31□□□□□ -1.72
CYLD-216ENST00000569891 GYPEP15421 78 aa4.31□□□□□ -1.72
CYLD-216ENST00000569891 SPATA25Q9BR10 227 aa4.31□□□□□ -1.72
CYLD-216ENST00000569891 ACANP16112 2415 aa4.31□□□□□ -1.72
CYLD-216ENST00000569891 J3QL48 77 aa4.31□□□□□ -1.72
CYLD-216ENST00000569891 GIG44P09565 113 aaPredicted RBP4.31□□□□□ -1.72
CYLD-216ENST00000569891 SMIM13P0DJ93 91 aa4.31□□□□□ -1.72
CYLD-216ENST00000569891 GTF2H5Q6ZYL4 71 aa4.31□□□□□ -1.72
CYLD-216ENST00000569891 AMELXQ99217 191 aa4.31□□□□□ -1.72
CYLD-216ENST00000569891 UBE2D4Q9Y2X8 147 aa4.31□□□□□ -1.72
CYLD-216ENST00000569891 WNK1Q9H4A3 2382 aa4.31□□□□□ -1.72
CYLD-216ENST00000569891 IGHV4-28A0A0C4DH34 117 aa4.31□□□□□ -1.72
CYLD-216ENST00000569891 TMEM262E9PQX1 116 aa4.31□□□□□ -1.72
CYLD-216ENST00000569891 F5H768 121 aa4.31□□□□□ -1.72
CYLD-216ENST00000569891 J3QQQ9 107 aa4.31□□□□□ -1.72
CYLD-216ENST00000569891 FHL2Q14192 279 aa4.31□□□□□ -1.72
CYLD-216ENST00000569891 SNHG12Q9BXW3 62 aa4.31□□□□□ -1.72
CYLD-216ENST00000569891 TRBV6-8A0A0A6YYG3 113 aa4.3□□□□□ -1.72
CYLD-216ENST00000569891 C11orf68Q9H3H3 251 aaKnown RBP4.3□□□□□ -1.72
CYLD-216ENST00000569891 SORL1Q92673 2214 aa4.3□□□□□ -1.72
CYLD-216ENST00000569891 H3BNG1 76 aa4.3□□□□□ -1.72
CYLD-216ENST00000569891 RPL24P83731 157 aaKnown RBP4.3□□□□□ -1.72
CYLD-216ENST00000569891 CHCHD7Q9BUK0 85 aa4.3□□□□□ -1.72
CYLD-216ENST00000569891 X6R8D5 127 aa4.3□□□□□ -1.72
CYLD-216ENST00000569891 MUC4Q99102 2169 aa4.3□□□□□ -1.72
CYLD-216ENST00000569891 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.3□□□□□ -1.72
CYLD-216ENST00000569891 IGHV3-38A0A0C4DH36 116 aa4.3□□□□□ -1.72
CYLD-216ENST00000569891 HERV-K104P63124 156 aa4.3□□□□□ -1.72
CYLD-216ENST00000569891 MAJINQ3KP22 176 aa4.3□□□□□ -1.72
CYLD-216ENST00000569891 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.3□□□□□ -1.72
CYLD-216ENST00000569891 IGKV2-29A2NJV5 120 aaPredicted RBP4.3□□□□□ -1.72
CYLD-216ENST00000569891 P0DMU3 169 aa4.29□□□□□ -1.72
CYLD-216ENST00000569891 FAM231AP0DMU4 169 aa4.29□□□□□ -1.72
CYLD-216ENST00000569891 FAM231CP0DMU5 169 aa4.29□□□□□ -1.72
CYLD-216ENST00000569891 MPV17L2Q567V2 206 aa4.29□□□□□ -1.72
CYLD-216ENST00000569891 KRTAP3-3Q9BYR6 98 aa4.29□□□□□ -1.72
CYLD-216ENST00000569891 KRTAP3-2Q9BYR7 98 aa4.29□□□□□ -1.72
CYLD-216ENST00000569891 IGHV1-58A0A0C4DH39 117 aa4.29□□□□□ -1.72
CYLD-216ENST00000569891 FLNBO75369 2602 aaKnown RBP4.29□□□□□ -1.72
CYLD-216ENST00000569891 APOMO95445 188 aa4.29□□□□□ -1.72
CYLD-216ENST00000569891 BVES-AS1Q5T3Y7 98 aa4.29□□□□□ -1.72
CYLD-216ENST00000569891 TMEM223A0PJW6 202 aa4.28□□□□□ -1.72
CYLD-216ENST00000569891 PLAC8L1A1L4L8 177 aa4.28□□□□□ -1.72
CYLD-216ENST00000569891 VAMP3Q15836 100 aa4.28□□□□□ -1.72
CYLD-216ENST00000569891 SPANXB1Q9NS25 103 aaPredicted RBP4.28□□□□□ -1.72
CYLD-216ENST00000569891 MTORP42345 2549 aa4.28□□□□□ -1.72
CYLD-216ENST00000569891 A0A1B0GUV1 79 aa4.28□□□□□ -1.72
CYLD-216ENST00000569891 PRSS2P07478 247 aa4.28□□□□□ -1.72
CYLD-216ENST00000569891 IFITM1P13164 125 aa4.28□□□□□ -1.72
CYLD-216ENST00000569891 LINC01561Q8N1V8 128 aa4.28□□□□□ -1.72
CYLD-216ENST00000569891 VSIG2Q96IQ7 327 aa4.28□□□□□ -1.72
CYLD-216ENST00000569891 A0A0J9YXV3 536 aa4.28□□□□□ -1.72
CYLD-216ENST00000569891 HTN3P15516 51 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms