RNA–Protein interactions for RNA: ENST00000564745.1

CDH1-207, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-207ENST00000564745 PDE6HQ13956 83 aa2.41□□□□□ -2.02
CDH1-207ENST00000564745 RPL39P5Q59GN2 51 aa2.41□□□□□ -2.02
CDH1-207ENST00000564745 Q5XG85 94 aa2.41□□□□□ -2.02
CDH1-207ENST00000564745 SFTA2Q6UW10 78 aa2.41□□□□□ -2.02
CDH1-207ENST00000564745 C2orf82Q6UX34 121 aa2.41□□□□□ -2.02
CDH1-207ENST00000564745 TMEM167AQ8TBQ9 72 aa2.41□□□□□ -2.02
CDH1-207ENST00000564745 TOMM6Q96B49 74 aa2.41□□□□□ -2.02
CDH1-207ENST00000564745 PROK2Q9HC23 129 aa2.41□□□□□ -2.02
CDH1-207ENST00000564745 EYSQ5T1H1 3165 aa2.41□□□□□ -2.02
CDH1-207ENST00000564745 RANBP2P49792 3224 aaKnown RBP2.41□□□□□ -2.02
CDH1-207ENST00000564745 CENPFP49454 3210 aa2.4□□□□□ -2.02
CDH1-207ENST00000564745 CACNA1DQ01668 2161 aa2.4□□□□□ -2.02
CDH1-207ENST00000564745 KMT2EQ8IZD2 1858 aa2.4□□□□□ -2.03
CDH1-207ENST00000564745 TRAV13-1A0A0B4J241 112 aa2.4□□□□□ -2.03
CDH1-207ENST00000564745 TINCRA0A1B0GVN0 87 aa2.4□□□□□ -2.03
CDH1-207ENST00000564745 J3QLI3 93 aa2.4□□□□□ -2.03
CDH1-207ENST00000564745 COX6CP09669 75 aa2.4□□□□□ -2.03
CDH1-207ENST00000564745 SAA2P0DJI9 122 aaPredicted RBP2.4□□□□□ -2.03
CDH1-207ENST00000564745 SPTBP11277 2137 aa2.4□□□□□ -2.03
CDH1-207ENST00000564745 COX6A1P12074 109 aa2.4□□□□□ -2.03
CDH1-207ENST00000564745 PSMB8P28062 276 aa2.4□□□□□ -2.03
CDH1-207ENST00000564745 WT1-ASQ06250 92 aa2.4□□□□□ -2.03
CDH1-207ENST00000564745 C4orf26Q17RF5 130 aa2.4□□□□□ -2.03
CDH1-207ENST00000564745 EXOC3-AS1Q8N2X6 119 aa2.4□□□□□ -2.03
CDH1-207ENST00000564745 C3orf56Q8N813 242 aa2.4□□□□□ -2.03
CDH1-207ENST00000564745 PLEKHB2Q96CS7 222 aa2.4□□□□□ -2.03
CDH1-207ENST00000564745 SCGB3A1Q96QR1 104 aa2.4□□□□□ -2.03
CDH1-207ENST00000564745 AGPAT4-IT1Q9H0P7 198 aa2.4□□□□□ -2.03
CDH1-207ENST00000564745 DYNLRB1Q9NP97 96 aa2.4□□□□□ -2.03
CDH1-207ENST00000564745 LINC00527Q9UJ94 153 aa2.4□□□□□ -2.03
CDH1-207ENST00000564745 KLK5Q9Y337 293 aaPredicted RBP2.4□□□□□ -2.03
CDH1-207ENST00000564745 R4GN34 69 aa2.4□□□□□ -2.03
CDH1-207ENST00000564745 ALPK2Q86TB3 2170 aa2.4□□□□□ -2.03
CDH1-207ENST00000564745 PTPRZ1P23471 2315 aaPredicted RBP2.4□□□□□ -2.03
CDH1-207ENST00000564745 MPDZO75970 2070 aa2.4□□□□□ -2.03
CDH1-207ENST00000564745 FAM208BQ5VWN6 2430 aa2.39□□□□□ -2.03
CDH1-207ENST00000564745 A0A0J9YX75 114 aa2.39□□□□□ -2.03
CDH1-207ENST00000564745 C11orf86A6NJI1 115 aa2.39□□□□□ -2.03
CDH1-207ENST00000564745 LST1O00453 97 aa2.39□□□□□ -2.03
CDH1-207ENST00000564745 NDUFC2O95298 119 aa2.39□□□□□ -2.03
CDH1-207ENST00000564745 PPP1R17O96001 155 aa2.39□□□□□ -2.03
CDH1-207ENST00000564745 SAA1P0DJI8 122 aaPredicted RBP2.39□□□□□ -2.03
CDH1-207ENST00000564745 CCL3P10147 92 aa2.39□□□□□ -2.03
CDH1-207ENST00000564745 HRES1P13985 223 aa2.39□□□□□ -2.03
CDH1-207ENST00000564745 DEFB103AP81534 67 aa2.39□□□□□ -2.03
CDH1-207ENST00000564745 FAM201AQ5SY85 155 aa2.39□□□□□ -2.03
CDH1-207ENST00000564745 HRCT1Q6UXD1 115 aa2.39□□□□□ -2.03
CDH1-207ENST00000564745 ZNF833PQ6ZTB9 187 aa2.39□□□□□ -2.03
CDH1-207ENST00000564745 SERP2Q8N6R1 65 aa2.39□□□□□ -2.03
CDH1-207ENST00000564745 FAM216BQ8N7L0 139 aa2.39□□□□□ -2.03
CDH1-207ENST00000564745 DAND5Q8N907 189 aa2.39□□□□□ -2.03
CDH1-207ENST00000564745 SLC50A1Q9BRV3 221 aa2.39□□□□□ -2.03
CDH1-207ENST00000564745 UPK3BQ9BT76 320 aa2.39□□□□□ -2.03
CDH1-207ENST00000564745 SMIM2Q9BVW6 85 aa2.39□□□□□ -2.03
CDH1-207ENST00000564745 MRPL36Q9P0J6 103 aaKnown RBP2.39□□□□□ -2.03
CDH1-207ENST00000564745 CEP290O15078 2479 aa2.39□□□□□ -2.03
CDH1-207ENST00000564745 DOPEY1Q5JWR5 2465 aa2.39□□□□□ -2.03
CDH1-207ENST00000564745 ASH1LQ9NR48 2969 aaKnown RBP2.38□□□□□ -2.03
CDH1-207ENST00000564745 COL5A1P20908 1838 aaPredicted RBP2.38□□□□□ -2.03
CDH1-207ENST00000564745 ABCA12Q86UK0 2595 aa2.38□□□□□ -2.03
CDH1-207ENST00000564745 CHD6Q8TD26 2715 aa2.38□□□□□ -2.03
CDH1-207ENST00000564745 hADV29S1A0JD25 119 aa2.38□□□□□ -2.03
CDH1-207ENST00000564745 SDHAF1A6NFY7 115 aa2.38□□□□□ -2.03
CDH1-207ENST00000564745 LY6LH3BQJ8 138 aa2.38□□□□□ -2.03
CDH1-207ENST00000564745 H3BRN7 92 aa2.38□□□□□ -2.03
CDH1-207ENST00000564745 J3QQQ9 107 aa2.38□□□□□ -2.03
CDH1-207ENST00000564745 M0R381 172 aa2.38□□□□□ -2.03
CDH1-207ENST00000564745 ANKRD17O75179 2603 aaKnown RBP2.38□□□□□ -2.03
CDH1-207ENST00000564745 IGKV1-16P04430 117 aa2.38□□□□□ -2.03
CDH1-207ENST00000564745 ZNF22P17026 224 aaPredicted RBP2.38□□□□□ -2.03
CDH1-207ENST00000564745 HES3Q5TGS1 186 aa2.38□□□□□ -2.03
CDH1-207ENST00000564745 DCANP1Q8TF63 244 aa2.38□□□□□ -2.03
CDH1-207ENST00000564745 TMEM141Q96I45 108 aa2.38□□□□□ -2.03
CDH1-207ENST00000564745 AMELXQ99217 191 aa2.38□□□□□ -2.03
CDH1-207ENST00000564745 TEP1Q99973 2627 aaKnown RBP2.38□□□□□ -2.03
CDH1-207ENST00000564745 DPH3P1Q9H4G8 78 aa2.38□□□□□ -2.03
CDH1-207ENST00000564745 RPUSD1Q9UJJ7 312 aaKnown RBP2.38□□□□□ -2.03
CDH1-207ENST00000564745 ACACBO00763 2458 aa2.37□□□□□ -2.03
CDH1-207ENST00000564745 DOCK11Q5JSL3 2073 aa2.37□□□□□ -2.03
CDH1-207ENST00000564745 TRAV12-2A0A075B6T6 113 aa2.37□□□□□ -2.03
CDH1-207ENST00000564745 TRBV7-1A0A0A6YYK4 115 aa2.37□□□□□ -2.03
CDH1-207ENST00000564745 E7EUB6 86 aa2.37□□□□□ -2.03
CDH1-207ENST00000564745 C5orf67F2Z3F1 127 aa2.37□□□□□ -2.03
CDH1-207ENST00000564745 H3BQ85 93 aa2.37□□□□□ -2.03
CDH1-207ENST00000564745 LEPROTO15243 131 aa2.37□□□□□ -2.03
CDH1-207ENST00000564745 LGALS3P17931 250 aaKnown RBP2.37□□□□□ -2.03
CDH1-207ENST00000564745 MRPS36P82909 103 aaKnown RBP2.37□□□□□ -2.03
CDH1-207ENST00000564745 VMA21Q3ZAQ7 101 aa2.37□□□□□ -2.03
CDH1-207ENST00000564745 ZNF826PQ6ZT77 177 aa2.37□□□□□ -2.03
CDH1-207ENST00000564745 MUSTN1Q8IVN3 82 aa2.37□□□□□ -2.03
CDH1-207ENST00000564745 TMEM86BQ8N661 226 aa2.37□□□□□ -2.03
CDH1-207ENST00000564745 SMCR5Q8TEV8 140 aa2.37□□□□□ -2.03
CDH1-207ENST00000564745 COPS9Q8WXC6 57 aa2.37□□□□□ -2.03
CDH1-207ENST00000564745 TIMM21Q9BVV7 248 aa2.37□□□□□ -2.03
CDH1-207ENST00000564745 ICOSQ9Y6W8 199 aa2.37□□□□□ -2.03
CDH1-207ENST00000564745 TRAV8-3A0A0A6YYJ7 113 aa2.36□□□□□ -2.03
CDH1-207ENST00000564745 IGKV2-24A0A0C4DH68 120 aa2.36□□□□□ -2.03
CDH1-207ENST00000564745 IGIPA6NJ69 53 aa2.36□□□□□ -2.03
CDH1-207ENST00000564745 A8MWP4 228 aa2.36□□□□□ -2.03
CDH1-207ENST00000564745 I3L2K1 104 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms