RNA–Protein interactions for RNA: ENST00000563645.1

GDE1-202, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 2

Gene GDE1, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-202ENST00000563645 A0A1B0GW54 56 aa2.41□□□□□ -2.02
GDE1-202ENST00000563645 IGIPA6NJ69 53 aa2.41□□□□□ -2.02
GDE1-202ENST00000563645 I3L3M4 83 aa2.41□□□□□ -2.02
GDE1-202ENST00000563645 PSCAO43653 123 aa2.41□□□□□ -2.02
GDE1-202ENST00000563645 LY6HO94772 140 aa2.41□□□□□ -2.02
GDE1-202ENST00000563645 IGLV1-47P01700 117 aa2.41□□□□□ -2.02
GDE1-202ENST00000563645 PRB4P10163 310 aaPredicted RBP2.41□□□□□ -2.02
GDE1-202ENST00000563645 EDDM3BP56851 147 aa2.41□□□□□ -2.02
GDE1-202ENST00000563645 FXYD7P58549 80 aa2.41□□□□□ -2.02
GDE1-202ENST00000563645 KRTAP10-1P60331 282 aa2.41□□□□□ -2.02
GDE1-202ENST00000563645 TMEM61Q8N0U2 210 aa2.41□□□□□ -2.02
GDE1-202ENST00000563645 B9D2Q9BPU9 175 aa2.41□□□□□ -2.02
GDE1-202ENST00000563645 R4GMQ9 66 aa2.41□□□□□ -2.02
GDE1-202ENST00000563645 MED13Q9UHV7 2174 aa2.41□□□□□ -2.02
GDE1-202ENST00000563645 GOLGA4Q13439 2230 aaKnown RBP2.41□□□□□ -2.02
GDE1-202ENST00000563645 IGHV1OR15-1A0A075B7D0 117 aa2.4□□□□□ -2.03
GDE1-202ENST00000563645 TRBV6-6A0A0A6YYG2 114 aa2.4□□□□□ -2.03
GDE1-202ENST00000563645 TRBV6-8A0A0A6YYG3 113 aa2.4□□□□□ -2.03
GDE1-202ENST00000563645 D6R8Y8 96 aa2.4□□□□□ -2.03
GDE1-202ENST00000563645 CHKB-CPT1BH3BT56 60 aa2.4□□□□□ -2.03
GDE1-202ENST00000563645 H7C2G1 150 aa2.4□□□□□ -2.03
GDE1-202ENST00000563645 PANO1I0J062 215 aa2.4□□□□□ -2.03
GDE1-202ENST00000563645 ZNF861PO60384 105 aa2.4□□□□□ -2.03
GDE1-202ENST00000563645 NDUFA3O95167 84 aa2.4□□□□□ -2.03
GDE1-202ENST00000563645 IGKV1-39P01597 117 aa2.4□□□□□ -2.03
GDE1-202ENST00000563645 IGKV1D-39P04432 117 aa2.4□□□□□ -2.03
GDE1-202ENST00000563645 LCE1CQ5T751 118 aa2.4□□□□□ -2.03
GDE1-202ENST00000563645 LCE1BQ5T7P3 118 aa2.4□□□□□ -2.03
GDE1-202ENST00000563645 CXCL17Q6UXB2 119 aa2.4□□□□□ -2.03
GDE1-202ENST00000563645 KRTAP5-2Q701N4 177 aa2.4□□□□□ -2.03
GDE1-202ENST00000563645 MUSTN1Q8IVN3 82 aa2.4□□□□□ -2.03
GDE1-202ENST00000563645 Q8IYB0 196 aa2.4□□□□□ -2.03
GDE1-202ENST00000563645 Q8N814 137 aa2.4□□□□□ -2.03
GDE1-202ENST00000563645 FAM104AQ969W3 186 aa2.4□□□□□ -2.03
GDE1-202ENST00000563645 C16orf74Q96GX8 76 aa2.4□□□□□ -2.03
GDE1-202ENST00000563645 AMELXQ99217 191 aa2.4□□□□□ -2.03
GDE1-202ENST00000563645 RETNLBQ9BQ08 111 aa2.4□□□□□ -2.03
GDE1-202ENST00000563645 LIMD2Q9BT23 127 aa2.4□□□□□ -2.03
GDE1-202ENST00000563645 LCE3DQ9BYE3 92 aa2.4□□□□□ -2.03
GDE1-202ENST00000563645 CCL28Q9NRJ3 127 aa2.4□□□□□ -2.03
GDE1-202ENST00000563645 SPTBP11277 2137 aa2.39□□□□□ -2.03
GDE1-202ENST00000563645 ARHGAP32A7KAX9 2087 aa2.39□□□□□ -2.03
GDE1-202ENST00000563645 IGLV2-18A0A075B6J9 118 aa2.39□□□□□ -2.03
GDE1-202ENST00000563645 TRAV10A0A0B4J240 114 aa2.39□□□□□ -2.03
GDE1-202ENST00000563645 IGKV1-6A0A0C4DH72 117 aa2.39□□□□□ -2.03
GDE1-202ENST00000563645 A0A0J9YX75 114 aa2.39□□□□□ -2.03
GDE1-202ENST00000563645 LOC101927531A0A1B0GV80 90 aa2.39□□□□□ -2.03
GDE1-202ENST00000563645 DNAL4O96015 105 aa2.39□□□□□ -2.03
GDE1-202ENST00000563645 LHBP01229 141 aa2.39□□□□□ -2.03
GDE1-202ENST00000563645 TFF1P04155 84 aa2.39□□□□□ -2.03
GDE1-202ENST00000563645 IGKV3-11P04433 115 aa2.39□□□□□ -2.03
GDE1-202ENST00000563645 ARMS2P0C7Q2 107 aa2.39□□□□□ -2.03
GDE1-202ENST00000563645 CCL3P10147 92 aa2.39□□□□□ -2.03
GDE1-202ENST00000563645 RPL27AP46776 148 aaKnown RBP2.39□□□□□ -2.03
GDE1-202ENST00000563645 LINC00322Q6ZN03 302 aaPredicted RBP2.39□□□□□ -2.03
GDE1-202ENST00000563645 C1orf64Q8NEQ6 169 aa2.39□□□□□ -2.03
GDE1-202ENST00000563645 TMEM254Q8TBM7 123 aa2.39□□□□□ -2.03
GDE1-202ENST00000563645 CDC42SE2Q9NRR3 84 aa2.39□□□□□ -2.03
GDE1-202ENST00000563645 MDC1Q14676 2089 aaKnown RBP2.38□□□□□ -2.03
GDE1-202ENST00000563645 HEATR5BQ9P2D3 2071 aa2.38□□□□□ -2.03
GDE1-202ENST00000563645 COL4A1P02462 1669 aa2.38□□□□□ -2.03
GDE1-202ENST00000563645 TRBV6-1A0A0K0K1D8 114 aa2.38□□□□□ -2.03
GDE1-202ENST00000563645 IGHV3-23P01764 117 aa2.38□□□□□ -2.03
GDE1-202ENST00000563645 IGHV1-2P23083 117 aa2.38□□□□□ -2.03
GDE1-202ENST00000563645 TSPEAR-AS2P59090 65 aa2.38□□□□□ -2.03
GDE1-202ENST00000563645 ENHOQ6UWT2 76 aa2.38□□□□□ -2.03
GDE1-202ENST00000563645 ZNF833PQ6ZTB9 187 aa2.38□□□□□ -2.03
GDE1-202ENST00000563645 DEFB106AQ8N104 65 aa2.38□□□□□ -2.03
GDE1-202ENST00000563645 C20orf203Q8NBC4 194 aa2.38□□□□□ -2.03
GDE1-202ENST00000563645 UBALD1Q8TB05 177 aa2.38□□□□□ -2.03
GDE1-202ENST00000563645 S4R3C0 116 aa2.38□□□□□ -2.03
GDE1-202ENST00000563645 ARID1AO14497 2285 aa2.37□□□□□ -2.03
GDE1-202ENST00000563645 IGLV3-16A0A075B6K0 115 aa2.37□□□□□ -2.03
GDE1-202ENST00000563645 IGHV3-72A0A0B4J1Y9 119 aa2.37□□□□□ -2.03
GDE1-202ENST00000563645 M0R1W7 72 aa2.37□□□□□ -2.03
GDE1-202ENST00000563645 IGLV3-19P01714 112 aa2.37□□□□□ -2.03
GDE1-202ENST00000563645 TRGV3P03979 118 aa2.37□□□□□ -2.03
GDE1-202ENST00000563645 CGB3P0DN86 165 aa2.37□□□□□ -2.03
GDE1-202ENST00000563645 CGB7P0DN87 165 aa2.37□□□□□ -2.03
GDE1-202ENST00000563645 C1orf134Q5TEV5 83 aa2.37□□□□□ -2.03
GDE1-202ENST00000563645 MYO7BQ6PIF6 2116 aa2.37□□□□□ -2.03
GDE1-202ENST00000563645 LYZL1Q6UWQ5 148 aa2.37□□□□□ -2.03
GDE1-202ENST00000563645 ADM2Q7Z4H4 148 aa2.37□□□□□ -2.03
GDE1-202ENST00000563645 SCGB3A1Q96QR1 104 aa2.37□□□□□ -2.03
GDE1-202ENST00000563645 TMEM14CQ9P0S9 112 aa2.37□□□□□ -2.03
GDE1-202ENST00000563645 LRCOL1A6NCL2 159 aa2.36□□□□□ -2.03
GDE1-202ENST00000563645 IGHV3-48P01763 117 aa2.36□□□□□ -2.03
GDE1-202ENST00000563645 NREPQ16612 68 aa2.36□□□□□ -2.03
GDE1-202ENST00000563645 C10orf128Q5T292 105 aa2.36□□□□□ -2.03
GDE1-202ENST00000563645 CASC2Q6XLA1 102 aa2.36□□□□□ -2.03
GDE1-202ENST00000563645 ZFAND2AQ8N6M9 145 aa2.36□□□□□ -2.03
GDE1-202ENST00000563645 WFDC9Q8NEX5 89 aa2.36□□□□□ -2.03
GDE1-202ENST00000563645 XAGE1AQ9HD64 81 aa2.36□□□□□ -2.03
GDE1-202ENST00000563645 A6NED7 52 aa2.35□□□□□ -2.03
GDE1-202ENST00000563645 CTSGP08311 255 aa2.35□□□□□ -2.03
GDE1-202ENST00000563645 RPS27P42677 84 aaKnown RBP2.35□□□□□ -2.03
GDE1-202ENST00000563645 ROMO1P60602 79 aa2.35□□□□□ -2.03
GDE1-202ENST00000563645 HCP5Q6MZN7 132 aa2.35□□□□□ -2.03
GDE1-202ENST00000563645 Q8NDZ9 215 aa2.35□□□□□ -2.03
GDE1-202ENST00000563645 FDCSPQ8NFU4 85 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms