RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 MIR22HGQ0VDD5 57 aa1.28□□□□□ -2.2
SHCBP1-202ENST00000563219 PLGLAQ15195 96 aa1.28□□□□□ -2.2
SHCBP1-202ENST00000563219 SFTA2Q6UW10 78 aa1.28□□□□□ -2.2
SHCBP1-202ENST00000563219 LYPD5Q6UWN5 251 aa1.28□□□□□ -2.2
SHCBP1-202ENST00000563219 VMO1Q7Z5L0 202 aa1.28□□□□□ -2.2
SHCBP1-202ENST00000563219 FAM223AQ8IWN6 122 aa1.28□□□□□ -2.2
SHCBP1-202ENST00000563219 C20orf197Q8N268 126 aa1.28□□□□□ -2.2
SHCBP1-202ENST00000563219 Q8N6K4 173 aa1.28□□□□□ -2.2
SHCBP1-202ENST00000563219 IFI27L1Q96BM0 104 aa1.28□□□□□ -2.2
SHCBP1-202ENST00000563219 FAM167A-AS1Q96KT0 104 aa1.28□□□□□ -2.2
SHCBP1-202ENST00000563219 HILPDAQ9Y5L2 63 aa1.28□□□□□ -2.2
SHCBP1-202ENST00000563219 C1orf167Q5SNV9 1468 aa1.28□□□□□ -2.2
SHCBP1-202ENST00000563219 HMGXB3Q12766 1538 aa1.28□□□□□ -2.2
SHCBP1-202ENST00000563219 GLI2P10070 1586 aa1.28□□□□□ -2.2
SHCBP1-202ENST00000563219 UGGT1Q9NYU2 1555 aa1.28□□□□□ -2.2
SHCBP1-202ENST00000563219 KDM6BO15054 1643 aa1.28□□□□□ -2.2
SHCBP1-202ENST00000563219 SHROOM2Q13796 1616 aa1.28□□□□□ -2.2
SHCBP1-202ENST00000563219 MROH2AA6NES4 1674 aa1.28□□□□□ -2.2
SHCBP1-202ENST00000563219 KIF1AQ12756 1690 aa1.28□□□□□ -2.2
SHCBP1-202ENST00000563219 USP54Q70EL1 1684 aa1.28□□□□□ -2.2
SHCBP1-202ENST00000563219 CDC42BPAQ5VT25 1732 aa1.28□□□□□ -2.2
SHCBP1-202ENST00000563219 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.28□□□□□ -2.2
SHCBP1-202ENST00000563219 SIPA1L3O60292 1781 aaPredicted RBP1.28□□□□□ -2.2
SHCBP1-202ENST00000563219 CEP192Q8TEP8 1941 aa1.28□□□□□ -2.2
SHCBP1-202ENST00000563219 CR1P17927 2039 aa1.27□□□□□ -2.21
SHCBP1-202ENST00000563219 PLXNA2O75051 1894 aa1.27□□□□□ -2.21
SHCBP1-202ENST00000563219 PDCD11Q14690 1871 aaKnown RBP1.27□□□□□ -2.21
SHCBP1-202ENST00000563219 IFT172Q9UG01 1749 aa1.27□□□□□ -2.21
SHCBP1-202ENST00000563219 KIAA0556O60303 1618 aa1.27□□□□□ -2.21
SHCBP1-202ENST00000563219 TRBV7-3A0A075B6L6 115 aa1.27□□□□□ -2.21
SHCBP1-202ENST00000563219 TMEM30CPA0ZSE6 113 aa1.27□□□□□ -2.21
SHCBP1-202ENST00000563219 TMEM14DPA8MWL7 114 aa1.27□□□□□ -2.21
SHCBP1-202ENST00000563219 F8WEM9 126 aa1.27□□□□□ -2.21
SHCBP1-202ENST00000563219 J3QKU1 62 aa1.27□□□□□ -2.21
SHCBP1-202ENST00000563219 LEPROTL1O95214 131 aa1.27□□□□□ -2.21
SHCBP1-202ENST00000563219 PRH1P02810 166 aa1.27□□□□□ -2.21
SHCBP1-202ENST00000563219 SPINT3P49223 89 aa1.27□□□□□ -2.21
SHCBP1-202ENST00000563219 UBE2D3P61077 147 aa1.27□□□□□ -2.21
SHCBP1-202ENST00000563219 UBE2D2P62837 147 aa1.27□□□□□ -2.21
SHCBP1-202ENST00000563219 ATXN8Q156A1 80 aa1.27□□□□□ -2.21
SHCBP1-202ENST00000563219 DEFB121Q5J5C9 76 aa1.27□□□□□ -2.21
SHCBP1-202ENST00000563219 NDUFA11Q86Y39 141 aa1.27□□□□□ -2.21
SHCBP1-202ENST00000563219 ZNF563Q8TA94 476 aa1.27□□□□□ -2.21
SHCBP1-202ENST00000563219 CYSTM1Q9H1C7 97 aa1.27□□□□□ -2.21
SHCBP1-202ENST00000563219 EXPH5Q8NEV8 1989 aa1.27□□□□□ -2.21
SHCBP1-202ENST00000563219 PTPRDP23468 1912 aa1.27□□□□□ -2.21
SHCBP1-202ENST00000563219 MGAMO43451 1857 aa1.26□□□□□ -2.21
SHCBP1-202ENST00000563219 BTAF1O14981 1849 aa1.26□□□□□ -2.21
SHCBP1-202ENST00000563219 CRYBG1Q9Y4K1 1723 aa1.26□□□□□ -2.21
SHCBP1-202ENST00000563219 TOP2BQ02880 1626 aa1.26□□□□□ -2.21
SHCBP1-202ENST00000563219 ABCC6O95255 1503 aa1.26□□□□□ -2.21
SHCBP1-202ENST00000563219 NEXMIFQ5QGS0 1516 aa1.26□□□□□ -2.21
SHCBP1-202ENST00000563219 KIAA0586Q9BVV6 1533 aa1.26□□□□□ -2.21
SHCBP1-202ENST00000563219 PTPRMP28827 1452 aa1.26□□□□□ -2.21
SHCBP1-202ENST00000563219 RALGAPBQ86X10 1494 aa1.26□□□□□ -2.21
SHCBP1-202ENST00000563219 BRWD1Q9NSI6 2320 aa1.26□□□□□ -2.21
SHCBP1-202ENST00000563219 A0A087WSZ3 146 aa1.26□□□□□ -2.21
SHCBP1-202ENST00000563219 TRAV12-3A0A0B4J271 114 aa1.26□□□□□ -2.21
SHCBP1-202ENST00000563219 TRAV22A0A0B4J277 110 aa1.26□□□□□ -2.21
SHCBP1-202ENST00000563219 TEX49A0A1B0GTD5 131 aa1.26□□□□□ -2.21
SHCBP1-202ENST00000563219 TFF1P04155 84 aa1.26□□□□□ -2.21
SHCBP1-202ENST00000563219 MIFP14174 115 aa1.26□□□□□ -2.21
SHCBP1-202ENST00000563219 IFI27P40305 119 aaPredicted RBP1.26□□□□□ -2.21
SHCBP1-202ENST00000563219 ATP5EP2Q5VTU8 51 aa1.26□□□□□ -2.21
SHCBP1-202ENST00000563219 ZCCHC23Q6ZST2 131 aa1.26□□□□□ -2.21
SHCBP1-202ENST00000563219 BPESC1Q9GZL8 116 aa1.26□□□□□ -2.21
SHCBP1-202ENST00000563219 C22orf24Q9Y442 160 aa1.26□□□□□ -2.21
SHCBP1-202ENST00000563219 SCN3AQ9NY46 2000 aa1.26□□□□□ -2.21
SHCBP1-202ENST00000563219 TRPM7Q96QT4 1865 aa1.26□□□□□ -2.21
SHCBP1-202ENST00000563219 LAMB2P55268 1798 aa1.26□□□□□ -2.21
SHCBP1-202ENST00000563219 UBR1Q8IWV7 1749 aa1.26□□□□□ -2.21
SHCBP1-202ENST00000563219 PLCH1Q4KWH8 1693 aa1.26□□□□□ -2.21
SHCBP1-202ENST00000563219 NESP48681 1621 aa1.26□□□□□ -2.21
SHCBP1-202ENST00000563219 BIVM-ERCC5R4GMW8 1640 aa1.26□□□□□ -2.21
SHCBP1-202ENST00000563219 RTTNQ86VV8 2226 aa1.25□□□□□ -2.21
SHCBP1-202ENST00000563219 EHBP1L1Q8N3D4 1523 aa1.25□□□□□ -2.21
SHCBP1-202ENST00000563219 ANKRD50Q9ULJ7 1429 aa1.25□□□□□ -2.21
SHCBP1-202ENST00000563219 IGLV3-32A0A0A0MS00 114 aa1.25□□□□□ -2.21
SHCBP1-202ENST00000563219 FAM223BA6NKX1 122 aa1.25□□□□□ -2.21
SHCBP1-202ENST00000563219 HIGD1CA8MV81 97 aa1.25□□□□□ -2.21
SHCBP1-202ENST00000563219 D6R8Y8 96 aa1.25□□□□□ -2.21
SHCBP1-202ENST00000563219 SAA2P0DJI9 122 aaPredicted RBP1.25□□□□□ -2.21
SHCBP1-202ENST00000563219 Q6JHZ5 121 aa1.25□□□□□ -2.21
SHCBP1-202ENST00000563219 MUSTN1Q8IVN3 82 aa1.25□□□□□ -2.21
SHCBP1-202ENST00000563219 TMEM14BQ9NUH8 114 aa1.25□□□□□ -2.21
SHCBP1-202ENST00000563219 MYOM1P52179 1685 aa1.25□□□□□ -2.21
SHCBP1-202ENST00000563219 ZNF142P52746 1687 aaPredicted RBP1.25□□□□□ -2.21
SHCBP1-202ENST00000563219 LRP5O75197 1615 aa1.25□□□□□ -2.21
SHCBP1-202ENST00000563219 IQGAP2Q13576 1575 aa1.25□□□□□ -2.21
SHCBP1-202ENST00000563219 ALS2Q96Q42 1657 aa1.24□□□□□ -2.21
SHCBP1-202ENST00000563219 TRBV6-7A0A0A0MS04 114 aa1.24□□□□□ -2.21
SHCBP1-202ENST00000563219 TRBV6-8A0A0A6YYG3 113 aa1.24□□□□□ -2.21
SHCBP1-202ENST00000563219 TRAV12-1A0A0B4J245 112 aa1.24□□□□□ -2.21
SHCBP1-202ENST00000563219 TRBV10-1A0A0K0K1A3 114 aa1.24□□□□□ -2.21
SHCBP1-202ENST00000563219 CXorf51AA0A1B0GTR3 108 aa1.24□□□□□ -2.21
SHCBP1-202ENST00000563219 ARMS2P0C7Q2 107 aa1.24□□□□□ -2.21
SHCBP1-202ENST00000563219 ELOF1P60002 83 aaKnown RBP1.24□□□□□ -2.21
SHCBP1-202ENST00000563219 C10orf55Q5SWW7 151 aa1.24□□□□□ -2.21
SHCBP1-202ENST00000563219 Q5VV11 94 aa1.24□□□□□ -2.21
SHCBP1-202ENST00000563219 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms