RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 MKI67P46013 3256 aaKnown RBP1.09□□□□□ -2.23
RTF1-207ENST00000561076 A0A0G2JND7 137 aa1.09□□□□□ -2.23
RTF1-207ENST00000561076 TRBV7-7A0A0K0K1E9 115 aa1.09□□□□□ -2.23
RTF1-207ENST00000561076 PDE6GP18545 87 aa1.09□□□□□ -2.23
RTF1-207ENST00000561076 UBE2D1P51668 147 aa1.09□□□□□ -2.23
RTF1-207ENST00000561076 SPAG11BQ08648 103 aa1.09□□□□□ -2.23
RTF1-207ENST00000561076 ZNF56Q15929 161 aa1.09□□□□□ -2.23
RTF1-207ENST00000561076 SPRNQ5BIV9 151 aa1.09□□□□□ -2.23
RTF1-207ENST00000561076 GDF5OSQ5U4N7 250 aa1.09□□□□□ -2.23
RTF1-207ENST00000561076 SPAG11AQ6PDA7 123 aa1.09□□□□□ -2.23
RTF1-207ENST00000561076 BRD3OSQ6XYD6 125 aa1.09□□□□□ -2.23
RTF1-207ENST00000561076 SPACA4Q8TDM5 124 aa1.09□□□□□ -2.23
RTF1-207ENST00000561076 TSLPQ969D9 159 aa1.09□□□□□ -2.23
RTF1-207ENST00000561076 FAM167A-AS1Q96KT0 104 aa1.09□□□□□ -2.23
RTF1-207ENST00000561076 ODF3Q96PU9 254 aa1.09□□□□□ -2.23
RTF1-207ENST00000561076 KRTAP9-2Q9BYQ4 174 aa1.09□□□□□ -2.23
RTF1-207ENST00000561076 LENEPQ9Y5L5 61 aa1.09□□□□□ -2.23
RTF1-207ENST00000561076 V9GYH0 126 aa1.09□□□□□ -2.23
RTF1-207ENST00000561076 V9GYV3 84 aa1.09□□□□□ -2.23
RTF1-207ENST00000561076 DOPEY1Q5JWR5 2465 aa1.09□□□□□ -2.24
RTF1-207ENST00000561076 UNC80Q8N2C7 3258 aa1.09□□□□□ -2.24
RTF1-207ENST00000561076 LTN1O94822 1766 aa1.08□□□□□ -2.24
RTF1-207ENST00000561076 MYO9BQ13459 2157 aa1.08□□□□□ -2.24
RTF1-207ENST00000561076 ABCA12Q86UK0 2595 aa1.08□□□□□ -2.24
RTF1-207ENST00000561076 AFDNP55196 1824 aaKnown RBP1.08□□□□□ -2.24
RTF1-207ENST00000561076 SCN7AQ01118 1682 aa1.08□□□□□ -2.24
RTF1-207ENST00000561076 PTPRZ1P23471 2315 aaPredicted RBP1.08□□□□□ -2.24
RTF1-207ENST00000561076 IGKV3-7A0A075B6H7 116 aa1.08□□□□□ -2.24
RTF1-207ENST00000561076 IGKV2-40A0A087WW87 121 aaPredicted RBP1.08□□□□□ -2.24
RTF1-207ENST00000561076 CTXND1A0A1B0GTU2 59 aa1.08□□□□□ -2.24
RTF1-207ENST00000561076 LOC101927531A0A1B0GV80 90 aa1.08□□□□□ -2.24
RTF1-207ENST00000561076 ZNF815PA8K554 130 aa1.08□□□□□ -2.24
RTF1-207ENST00000561076 SYS1-DBNDD2H3BUS1 97 aa1.08□□□□□ -2.24
RTF1-207ENST00000561076 INE1O15225 51 aa1.08□□□□□ -2.24
RTF1-207ENST00000561076 MRPS14O60783 128 aaKnown RBP1.08□□□□□ -2.24
RTF1-207ENST00000561076 IGKV2D-40P01614 121 aaPredicted RBP1.08□□□□□ -2.24
RTF1-207ENST00000561076 IGLV3-1P01715 115 aa1.08□□□□□ -2.24
RTF1-207ENST00000561076 RNASE3P12724 160 aaKnown RBP1.08□□□□□ -2.24
RTF1-207ENST00000561076 SFTA2Q6UW10 78 aa1.08□□□□□ -2.24
RTF1-207ENST00000561076 Q8N6K4 173 aa1.08□□□□□ -2.24
RTF1-207ENST00000561076 COX7B2Q8TF08 81 aa1.08□□□□□ -2.24
RTF1-207ENST00000561076 AMELYQ99218 206 aa1.08□□□□□ -2.24
RTF1-207ENST00000561076 ST20Q9HBF5 79 aa1.08□□□□□ -2.24
RTF1-207ENST00000561076 LINC00474Q9P2X8 69 aa1.08□□□□□ -2.24
RTF1-207ENST00000561076 SPCS1Q9Y6A9 102 aa1.08□□□□□ -2.24
RTF1-207ENST00000561076 ALPK3Q96L96 1907 aa1.08□□□□□ -2.24
RTF1-207ENST00000561076 RP1L1Q8IWN7 2480 aaPredicted RBP1.08□□□□□ -2.24
RTF1-207ENST00000561076 CCDC88CQ9P219 2028 aa1.08□□□□□ -2.24
RTF1-207ENST00000561076 VCANP13611 3396 aa1.07□□□□□ -2.24
RTF1-207ENST00000561076 COL5A3P25940 1745 aaPredicted RBP1.07□□□□□ -2.24
RTF1-207ENST00000561076 ANKRD26Q9UPS8 1709 aa1.07□□□□□ -2.24
RTF1-207ENST00000561076 RANBP2P49792 3224 aaKnown RBP1.07□□□□□ -2.24
RTF1-207ENST00000561076 KDM3BQ7LBC6 1761 aa1.07□□□□□ -2.24
RTF1-207ENST00000561076 ARFGEF2Q9Y6D5 1785 aa1.07□□□□□ -2.24
RTF1-207ENST00000561076 IGKV3D-7A0A0C4DH55 119 aa1.07□□□□□ -2.24
RTF1-207ENST00000561076 IGKV3OR2-268A0A0C4DH90 116 aa1.07□□□□□ -2.24
RTF1-207ENST00000561076 SMIM31A0A1B0GVY4 71 aa1.07□□□□□ -2.24
RTF1-207ENST00000561076 BCE1O60756 84 aa1.07□□□□□ -2.24
RTF1-207ENST00000561076 FXYD4P59646 89 aa1.07□□□□□ -2.24
RTF1-207ENST00000561076 SNRPFP62306 86 aaKnown RBP1.07□□□□□ -2.24
RTF1-207ENST00000561076 DEFA5Q01523 94 aa1.07□□□□□ -2.24
RTF1-207ENST00000561076 PSMG4Q5JS54 123 aa1.07□□□□□ -2.24
RTF1-207ENST00000561076 XAF1Q6GPH4 301 aa1.07□□□□□ -2.24
RTF1-207ENST00000561076 ALKAL2Q6UX46 152 aa1.07□□□□□ -2.24
RTF1-207ENST00000561076 Q6ZQY7 126 aa1.07□□□□□ -2.24
RTF1-207ENST00000561076 Q86TA4 180 aa1.07□□□□□ -2.24
RTF1-207ENST00000561076 KRTAP1-3Q8IUG1 177 aa1.07□□□□□ -2.24
RTF1-207ENST00000561076 C20orf78Q9BR46 151 aa1.07□□□□□ -2.24
RTF1-207ENST00000561076 SMCO4Q9NRQ5 59 aa1.07□□□□□ -2.24
RTF1-207ENST00000561076 ZDBF2Q9HCK1 2354 aa1.07□□□□□ -2.24
RTF1-207ENST00000561076 PRRC2AP48634 2157 aaKnown RBP1.07□□□□□ -2.24
RTF1-207ENST00000561076 SPAG17Q6Q759 2223 aa1.07□□□□□ -2.24
RTF1-207ENST00000561076 SHROOM3Q8TF72 1996 aa1.07□□□□□ -2.24
RTF1-207ENST00000561076 SPTBN5Q9NRC6 3674 aaKnown RBP1.07□□□□□ -2.24
RTF1-207ENST00000561076 EPG5Q9HCE0 2579 aa1.06□□□□□ -2.24
RTF1-207ENST00000561076 TJP1Q07157 1748 aa1.06□□□□□ -2.24
RTF1-207ENST00000561076 ITPR3Q14573 2671 aa1.06□□□□□ -2.24
RTF1-207ENST00000561076 LAMA3Q16787 3333 aa1.06□□□□□ -2.24
RTF1-207ENST00000561076 ZNF292O60281 2723 aa1.06□□□□□ -2.24
RTF1-207ENST00000561076 KIAA1549LQ6ZVL6 1849 aa1.06□□□□□ -2.24
RTF1-207ENST00000561076 PTPN13Q12923 2485 aa1.06□□□□□ -2.24
RTF1-207ENST00000561076 SSC5DA1L4H1 1573 aa1.06□□□□□ -2.24
RTF1-207ENST00000561076 DUOX1Q9NRD9 1551 aa1.06□□□□□ -2.24
RTF1-207ENST00000561076 A0A1W2PPM0 123 aa1.06□□□□□ -2.24
RTF1-207ENST00000561076 IGLC7A0M8Q6 106 aa1.06□□□□□ -2.24
RTF1-207ENST00000561076 IGKV2-29A2NJV5 120 aaPredicted RBP1.06□□□□□ -2.24
RTF1-207ENST00000561076 TMEM14DPA8MWL7 114 aa1.06□□□□□ -2.24
RTF1-207ENST00000561076 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.06□□□□□ -2.24
RTF1-207ENST00000561076 LOC730098B7Z3J9 87 aa1.06□□□□□ -2.24
RTF1-207ENST00000561076 M0R2N4 97 aa1.06□□□□□ -2.24
RTF1-207ENST00000561076 ACYP1P07311 99 aa1.06□□□□□ -2.24
RTF1-207ENST00000561076 NMBP08949 121 aa1.06□□□□□ -2.24
RTF1-207ENST00000561076 SAA2P0DJI9 122 aaPredicted RBP1.06□□□□□ -2.24
RTF1-207ENST00000561076 CCL3L1P16619 93 aa1.06□□□□□ -2.24
RTF1-207ENST00000561076 CAV3P56539 151 aa1.06□□□□□ -2.24
RTF1-207ENST00000561076 ETDBQ3ZM63 59 aa1.06□□□□□ -2.24
RTF1-207ENST00000561076 LCE1DQ5T752 114 aa1.06□□□□□ -2.24
RTF1-207ENST00000561076 PP632Q6XCG6 107 aa1.06□□□□□ -2.24
RTF1-207ENST00000561076 BAGE3Q86Y29 109 aa1.06□□□□□ -2.24
RTF1-207ENST00000561076 SMIM4Q8WVI0 70 aa1.06□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms