RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 HERVK_113P61574 105 aa9.04□□□□□ -0.96
SNX1-211ENST00000560829 TRBV6-8A0A0A6YYG3 113 aa9.04□□□□□ -0.96
SNX1-211ENST00000560829 A0A0J9YXV3 536 aa9.04□□□□□ -0.96
SNX1-211ENST00000560829 GYPEP15421 78 aa9.04□□□□□ -0.96
SNX1-211ENST00000560829 DGAT2L7PQ6IED9 249 aa9.04□□□□□ -0.96
SNX1-211ENST00000560829 TTTY13Q9BZ97 58 aa9.04□□□□□ -0.96
SNX1-211ENST00000560829 HIGD1BQ9P298 99 aa9.04□□□□□ -0.96
SNX1-211ENST00000560829 NBEAL2Q6ZNJ1 2754 aa9.03□□□□□ -0.96
SNX1-211ENST00000560829 ZNF22P17026 224 aaPredicted RBP9.03□□□□□ -0.96
SNX1-211ENST00000560829 TMEM170BQ5T4T1 132 aa9.03□□□□□ -0.96
SNX1-211ENST00000560829 PKD1L1Q8TDX9 2849 aa9.03□□□□□ -0.96
SNX1-211ENST00000560829 TRAV8-6A0A0B4J262 113 aa9.02□□□□□ -0.96
SNX1-211ENST00000560829 TINCRA0A1B0GVN0 87 aa9.02□□□□□ -0.96
SNX1-211ENST00000560829 PAX4O43316 350 aa9.02□□□□□ -0.96
SNX1-211ENST00000560829 HINT1P49773 126 aaPredicted RBP9.02□□□□□ -0.96
SNX1-211ENST00000560829 MPV17L2Q567V2 206 aa9.02□□□□□ -0.96
SNX1-211ENST00000560829 MAPKAPK5-AS1Q8N8E1 139 aa9.02□□□□□ -0.96
SNX1-211ENST00000560829 ATP6V0E2Q8NHE4 81 aa9.02□□□□□ -0.96
SNX1-211ENST00000560829 VSIG2Q96IQ7 327 aa9.02□□□□□ -0.96
SNX1-211ENST00000560829 TMEM223A0PJW6 202 aa9.02□□□□□ -0.97
SNX1-211ENST00000560829 ZNF25P17030 456 aaPredicted RBP9.02□□□□□ -0.97
SNX1-211ENST00000560829 UBE2D1P51668 147 aa9.02□□□□□ -0.97
SNX1-211ENST00000560829 BATFQ16520 125 aa9.02□□□□□ -0.97
SNX1-211ENST00000560829 RNASE13Q5GAN3 156 aaKnown RBP9.02□□□□□ -0.97
SNX1-211ENST00000560829 C11orf68Q9H3H3 251 aaKnown RBP9.02□□□□□ -0.97
SNX1-211ENST00000560829 CDC42SE2Q9NRR3 84 aa9.02□□□□□ -0.97
SNX1-211ENST00000560829 UBE2L6O14933 153 aa9.01□□□□□ -0.97
SNX1-211ENST00000560829 BVES-AS1Q5T3Y7 98 aa9.01□□□□□ -0.97
SNX1-211ENST00000560829 KPRPQ5T749 579 aaPredicted RBP9.01□□□□□ -0.97
SNX1-211ENST00000560829 FAM19A3Q7Z5A8 133 aa9.01□□□□□ -0.97
SNX1-211ENST00000560829 RETNQ9HD89 108 aa9.01□□□□□ -0.97
SNX1-211ENST00000560829 MYMXA0A1B0GTQ4 84 aa9□□□□□ -0.97
SNX1-211ENST00000560829 COL5A1-AS1Q5SY13 56 aa9□□□□□ -0.97
SNX1-211ENST00000560829 OR5A1Q8NGJ0 315 aa9□□□□□ -0.97
SNX1-211ENST00000560829 TRAV26-1A0A087WT03 109 aa9□□□□□ -0.97
SNX1-211ENST00000560829 TIRAPP58753 221 aa9□□□□□ -0.97
SNX1-211ENST00000560829 HSD52Q0P140 79 aa9□□□□□ -0.97
SNX1-211ENST00000560829 AMMECR1LQ6DCA0 310 aa9□□□□□ -0.97
SNX1-211ENST00000560829 TMEM101Q96IK0 257 aa9□□□□□ -0.97
SNX1-211ENST00000560829 MDFIQ99750 246 aa9□□□□□ -0.97
SNX1-211ENST00000560829 IGLV5-45A0A087WSX0 123 aa8.99□□□□□ -0.97
SNX1-211ENST00000560829 C12orf74Q32Q52 190 aa8.98□□□□□ -0.97
SNX1-211ENST00000560829 F5H768 121 aa8.98□□□□□ -0.97
SNX1-211ENST00000560829 LEPROTO15243 131 aa8.98□□□□□ -0.97
SNX1-211ENST00000560829 SEC11AP67812 179 aa8.98□□□□□ -0.97
SNX1-211ENST00000560829 A0A0J9YY99 117 aa8.97□□□□□ -0.97
SNX1-211ENST00000560829 J3QQQ9 107 aa8.97□□□□□ -0.97
SNX1-211ENST00000560829 TSPEAR-AS2P59090 65 aa8.97□□□□□ -0.97
SNX1-211ENST00000560829 GAGE6Q13070 117 aa8.97□□□□□ -0.97
SNX1-211ENST00000560829 CHCHD5Q9BSY4 110 aa8.97□□□□□ -0.97
SNX1-211ENST00000560829 ZNF815PA8K554 130 aa8.96□□□□□ -0.97
SNX1-211ENST00000560829 HERVK_113P63121 156 aa8.96□□□□□ -0.97
SNX1-211ENST00000560829 LINC00242Q5T6M2 205 aa8.96□□□□□ -0.97
SNX1-211ENST00000560829 SH2D6Q7Z4S9 175 aa8.96□□□□□ -0.97
SNX1-211ENST00000560829 PLEKHB2Q96CS7 222 aa8.96□□□□□ -0.97
SNX1-211ENST00000560829 GEMIN7Q9H840 131 aaKnown RBP8.96□□□□□ -0.97
SNX1-211ENST00000560829 K7EIL1 84 aa8.96□□□□□ -0.98
SNX1-211ENST00000560829 MRPL23Q16540 153 aaKnown RBP8.96□□□□□ -0.98
SNX1-211ENST00000560829 TAL2Q16559 108 aa8.96□□□□□ -0.98
SNX1-211ENST00000560829 IGHV1-58A0A0C4DH39 117 aa8.95□□□□□ -0.98
SNX1-211ENST00000560829 A0A1B0GUV1 79 aa8.95□□□□□ -0.98
SNX1-211ENST00000560829 A0A1B0GV90 55 aa8.95□□□□□ -0.98
SNX1-211ENST00000560829 H3BNG1 76 aa8.95□□□□□ -0.98
SNX1-211ENST00000560829 LINC00469Q8N7U9 141 aa8.95□□□□□ -0.98
SNX1-211ENST00000560829 IGLV4-60A0A075B6I1 120 aa8.94□□□□□ -0.98
SNX1-211ENST00000560829 HTN3P15516 51 aa8.94□□□□□ -0.98
SNX1-211ENST00000560829 LGALS3P17931 250 aaKnown RBP8.94□□□□□ -0.98
SNX1-211ENST00000560829 ORAOV1Q8WV07 137 aa8.94□□□□□ -0.98
SNX1-211ENST00000560829 TM2D3Q9BRN9 247 aa8.94□□□□□ -0.98
SNX1-211ENST00000560829 CDKN2A-AS1Q9UH64 79 aa8.94□□□□□ -0.98
SNX1-211ENST00000560829 ICOSQ9Y6W8 199 aa8.94□□□□□ -0.98
SNX1-211ENST00000560829 TRAV13-1A0A0B4J241 112 aa8.94□□□□□ -0.98
SNX1-211ENST00000560829 H3BRM9 83 aa8.94□□□□□ -0.98
SNX1-211ENST00000560829 IGHV3-30-3P0DP02 117 aa8.94□□□□□ -0.98
SNX1-211ENST00000560829 SPATA25Q9BR10 227 aa8.94□□□□□ -0.98
SNX1-211ENST00000560829 TM2D2Q9BX73 214 aa8.94□□□□□ -0.98
SNX1-211ENST00000560829 A0A096LPF7 62 aa8.93□□□□□ -0.98
SNX1-211ENST00000560829 PRB2P02812 416 aaPredicted RBP8.93□□□□□ -0.98
SNX1-211ENST00000560829 COX6A2Q02221 97 aa8.93□□□□□ -0.98
SNX1-211ENST00000560829 A0A0J9YWU9 116 aa8.92□□□□□ -0.98
SNX1-211ENST00000560829 Q6ZTC4 211 aa8.92□□□□□ -0.98
SNX1-211ENST00000560829 IGHV3-64A0A075B6Q5 118 aa8.91□□□□□ -0.98
SNX1-211ENST00000560829 TRAV8-3A0A0A6YYJ7 113 aa8.91□□□□□ -0.98
SNX1-211ENST00000560829 RBX1P62877 108 aa8.91□□□□□ -0.98
SNX1-211ENST00000560829 SCGB1D4Q6XE38 83 aa8.91□□□□□ -0.98
SNX1-211ENST00000560829 CEND1Q8N111 149 aa8.91□□□□□ -0.98
SNX1-211ENST00000560829 IGLV5-39A0A0G2JS06 123 aa8.91□□□□□ -0.98
SNX1-211ENST00000560829 HUWE1Q7Z6Z7 4374 aaKnown RBP8.9□□□□□ -0.98
SNX1-211ENST00000560829 A6NDN8 102 aa8.9□□□□□ -0.98
SNX1-211ENST00000560829 SPINK8P0C7L1 97 aa8.9□□□□□ -0.98
SNX1-211ENST00000560829 LELP1Q5T871 98 aa8.9□□□□□ -0.98
SNX1-211ENST00000560829 SPANXB1Q9NS25 103 aaPredicted RBP8.9□□□□□ -0.98
SNX1-211ENST00000560829 GCSHP23434 173 aa8.89□□□□□ -0.99
SNX1-211ENST00000560829 C11orf45Q8TAV5 145 aa8.89□□□□□ -0.99
SNX1-211ENST00000560829 HIST1H4GQ99525 98 aa8.89□□□□□ -0.99
SNX1-211ENST00000560829 SMIM1B2RUZ4 78 aa8.89□□□□□ -0.99
SNX1-211ENST00000560829 TMEM262E9PQX1 116 aa8.89□□□□□ -0.99
SNX1-211ENST00000560829 TAX1BP3O14907 124 aa8.89□□□□□ -0.99
SNX1-211ENST00000560829 FXYD2P54710 66 aa8.89□□□□□ -0.99
SNX1-211ENST00000560829 ZFAND6Q6FIF0 208 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms