RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 RNF183Q96D59 192 aa6.95□□□□□ -1.3
RTF1-206ENST00000560447 OPRPNQ99935 248 aaPredicted RBP6.95□□□□□ -1.3
RTF1-206ENST00000560447 IGHV3OR16-12A0A075B7B8 117 aa6.94□□□□□ -1.3
RTF1-206ENST00000560447 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.94□□□□□ -1.3
RTF1-206ENST00000560447 A0A0J9YXY3 114 aa6.94□□□□□ -1.3
RTF1-206ENST00000560447 PLAC8L1A1L4L8 177 aa6.94□□□□□ -1.3
RTF1-206ENST00000560447 K7ERJ3 54 aa6.94□□□□□ -1.3
RTF1-206ENST00000560447 LY6G6DO95868 133 aa6.94□□□□□ -1.3
RTF1-206ENST00000560447 PRM2P04554 102 aa6.94□□□□□ -1.3
RTF1-206ENST00000560447 IGHV3-30-3P0DP02 117 aa6.94□□□□□ -1.3
RTF1-206ENST00000560447 HERVK_113P63121 156 aa6.94□□□□□ -1.3
RTF1-206ENST00000560447 C9orf66Q5T8R8 295 aa6.94□□□□□ -1.3
RTF1-206ENST00000560447 Q6ZTI0 123 aa6.94□□□□□ -1.3
RTF1-206ENST00000560447 SBSPONQ8IVN8 264 aa6.94□□□□□ -1.3
RTF1-206ENST00000560447 KIR2DL5BQ8NHK3 375 aa6.94□□□□□ -1.3
RTF1-206ENST00000560447 GEMIN7Q9H840 131 aaKnown RBP6.94□□□□□ -1.3
RTF1-206ENST00000560447 CHD6Q8TD26 2715 aa6.93□□□□□ -1.3
RTF1-206ENST00000560447 TLN2Q9Y4G6 2542 aa6.93□□□□□ -1.3
RTF1-206ENST00000560447 A0A0B4J2C4 111 aa6.93□□□□□ -1.3
RTF1-206ENST00000560447 ZFAND6Q6FIF0 208 aa6.93□□□□□ -1.3
RTF1-206ENST00000560447 Q6ZUT4 128 aa6.93□□□□□ -1.3
RTF1-206ENST00000560447 VSIG2Q96IQ7 327 aa6.93□□□□□ -1.3
RTF1-206ENST00000560447 SPANXDQ9BXN6 97 aa6.93□□□□□ -1.3
RTF1-206ENST00000560447 PPDPFQ9H3Y8 114 aa6.93□□□□□ -1.3
RTF1-206ENST00000560447 SPANXCQ9NY87 97 aa6.93□□□□□ -1.3
RTF1-206ENST00000560447 ZNF469Q96JG9 3925 aaPredicted RBP6.93□□□□□ -1.3
RTF1-206ENST00000560447 TRBV20-1A0A075B6N2 111 aa6.92□□□□□ -1.3
RTF1-206ENST00000560447 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.92□□□□□ -1.3
RTF1-206ENST00000560447 IGKV2-29A2NJV5 120 aaPredicted RBP6.92□□□□□ -1.3
RTF1-206ENST00000560447 IFITM1P13164 125 aa6.92□□□□□ -1.3
RTF1-206ENST00000560447 RBX1P62877 108 aa6.92□□□□□ -1.3
RTF1-206ENST00000560447 C10orf126Q8N4M7 172 aa6.92□□□□□ -1.3
RTF1-206ENST00000560447 LINC00612Q8N6U2 182 aa6.92□□□□□ -1.3
RTF1-206ENST00000560447 DEFB104AQ8WTQ1 72 aa6.92□□□□□ -1.3
RTF1-206ENST00000560447 COPS9Q8WXC6 57 aa6.92□□□□□ -1.3
RTF1-206ENST00000560447 NOP10Q9NPE3 64 aaKnown RBP6.92□□□□□ -1.3
RTF1-206ENST00000560447 UNC79Q9P2D8 2635 aa6.91□□□□□ -1.3
RTF1-206ENST00000560447 TRGV2A0A075B6R0 118 aa6.91□□□□□ -1.3
RTF1-206ENST00000560447 TMEM101Q96IK0 257 aa6.91□□□□□ -1.3
RTF1-206ENST00000560447 NAA38Q9BRA0 125 aaKnown RBP6.91□□□□□ -1.3
RTF1-206ENST00000560447 TMEM243Q9BU79 118 aa6.91□□□□□ -1.3
RTF1-206ENST00000560447 PRO1854Q9UHT4 67 aa6.91□□□□□ -1.3
RTF1-206ENST00000560447 NDUFA12Q9UI09 145 aa6.91□□□□□ -1.3
RTF1-206ENST00000560447 SONP18583 2426 aaKnown RBP6.91□□□□□ -1.3
RTF1-206ENST00000560447 CCDC168Q8NDH2 2452 aa6.91□□□□□ -1.3
RTF1-206ENST00000560447 IGHV3-38A0A0C4DH36 116 aa6.9□□□□□ -1.3
RTF1-206ENST00000560447 IGLV5-39A0A0G2JS06 123 aa6.9□□□□□ -1.3
RTF1-206ENST00000560447 NDUFA1O15239 70 aa6.9□□□□□ -1.3
RTF1-206ENST00000560447 TSPAN13O95857 204 aa6.9□□□□□ -1.3
RTF1-206ENST00000560447 LINC00694P0DN24 101 aa6.9□□□□□ -1.3
RTF1-206ENST00000560447 RPL35AP18077 110 aaKnown RBP6.9□□□□□ -1.3
RTF1-206ENST00000560447 KRTAP10-3P60369 221 aa6.9□□□□□ -1.3
RTF1-206ENST00000560447 HIST2H2BDQ6DRA6 164 aa6.9□□□□□ -1.3
RTF1-206ENST00000560447 Q9UF83 564 aa6.9□□□□□ -1.3
RTF1-206ENST00000560447 NBPF19A0A087WUL8 3843 aa6.9□□□□□ -1.31
RTF1-206ENST00000560447 TRGV4A0A0C4DH28 118 aa6.89□□□□□ -1.31
RTF1-206ENST00000560447 J3QR89 54 aa6.89□□□□□ -1.31
RTF1-206ENST00000560447 UBE2L6O14933 153 aa6.89□□□□□ -1.31
RTF1-206ENST00000560447 CFC1BP0CG36 223 aa6.89□□□□□ -1.31
RTF1-206ENST00000560447 CFC1P0CG37 223 aa6.89□□□□□ -1.31
RTF1-206ENST00000560447 GAGE13Q4V321 117 aa6.89□□□□□ -1.31
RTF1-206ENST00000560447 CEMP1Q6PRD7 247 aaPredicted RBP6.89□□□□□ -1.31
RTF1-206ENST00000560447 NTM-AS1Q6ZSK4 140 aa6.89□□□□□ -1.31
RTF1-206ENST00000560447 CDC42SE2Q9NRR3 84 aa6.89□□□□□ -1.31
RTF1-206ENST00000560447 WNK1Q9H4A3 2382 aa6.89□□□□□ -1.31
RTF1-206ENST00000560447 GAGE12JA6NER3 117 aa6.88□□□□□ -1.31
RTF1-206ENST00000560447 LYRM9A8MSI8 78 aa6.88□□□□□ -1.31
RTF1-206ENST00000560447 M0QXV9 152 aa6.88□□□□□ -1.31
RTF1-206ENST00000560447 GAGE7O76087 117 aa6.88□□□□□ -1.31
RTF1-206ENST00000560447 APOMO95445 188 aa6.88□□□□□ -1.31
RTF1-206ENST00000560447 GAGE12FP0CL80 117 aa6.88□□□□□ -1.31
RTF1-206ENST00000560447 GAGE12GP0CL81 117 aa6.88□□□□□ -1.31
RTF1-206ENST00000560447 GAGE12IP0CL82 117 aa6.88□□□□□ -1.31
RTF1-206ENST00000560447 HERV-K104P63124 156 aa6.88□□□□□ -1.31
RTF1-206ENST00000560447 GAGE4Q13068 117 aa6.88□□□□□ -1.31
RTF1-206ENST00000560447 GAGE5Q13069 117 aa6.88□□□□□ -1.31
RTF1-206ENST00000560447 CIRBPQ14011 172 aaKnown RBP6.88□□□□□ -1.31
RTF1-206ENST00000560447 FHL2Q14192 279 aa6.88□□□□□ -1.31
RTF1-206ENST00000560447 MIAQ16674 131 aa6.88□□□□□ -1.31
RTF1-206ENST00000560447 LINC00242Q5T6M2 205 aa6.88□□□□□ -1.31
RTF1-206ENST00000560447 ATP6V0E2Q8NHE4 81 aa6.88□□□□□ -1.31
RTF1-206ENST00000560447 LITAFQ99732 161 aa6.88□□□□□ -1.31
RTF1-206ENST00000560447 HELZ2Q9BYK8 2649 aaKnown RBP6.88□□□□□ -1.31
RTF1-206ENST00000560447 HIVEP2P31629 2446 aa6.88□□□□□ -1.31
RTF1-206ENST00000560447 ITPR2Q14571 2701 aa6.87□□□□□ -1.31
RTF1-206ENST00000560447 A4D1N5 150 aa6.87□□□□□ -1.31
RTF1-206ENST00000560447 G3V4G9 280 aa6.87□□□□□ -1.31
RTF1-206ENST00000560447 APOC4P55056 127 aa6.87□□□□□ -1.31
RTF1-206ENST00000560447 MUSTN1Q8IVN3 82 aa6.87□□□□□ -1.31
RTF1-206ENST00000560447 SMR3AQ99954 134 aa6.87□□□□□ -1.31
RTF1-206ENST00000560447 WFDC10AQ9H1F0 79 aa6.87□□□□□ -1.31
RTF1-206ENST00000560447 CDKN2A-AS1Q9UH64 79 aa6.87□□□□□ -1.31
RTF1-206ENST00000560447 TRAV8-3A0A0A6YYJ7 113 aa6.86□□□□□ -1.31
RTF1-206ENST00000560447 CRLF1O75462 422 aa6.86□□□□□ -1.31
RTF1-206ENST00000560447 IGHV3-33P01772 117 aa6.86□□□□□ -1.31
RTF1-206ENST00000560447 SPINK8P0C7L1 97 aa6.86□□□□□ -1.31
RTF1-206ENST00000560447 SFTA2Q6UW10 78 aa6.86□□□□□ -1.31
RTF1-206ENST00000560447 CITED1Q99966 193 aa6.86□□□□□ -1.31
RTF1-206ENST00000560447 PRO0461Q9UI25 63 aa6.86□□□□□ -1.31
RTF1-206ENST00000560447 ERG28Q9UKR5 140 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms