RNA–Protein interactions for RNA: ENST00000557364.5

CHD8-213, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD8, Length 8,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-213ENST00000557364 PCP2Q8IVA1 136 aa6.25□□□□□ -1.41
CHD8-213ENST00000557364 K7ERJ3 54 aa6.25□□□□□ -1.41
CHD8-213ENST00000557364 IGLV1-40P01703 118 aa6.25□□□□□ -1.41
CHD8-213ENST00000557364 SPATA12Q7Z6I5 190 aa6.25□□□□□ -1.41
CHD8-213ENST00000557364 Q8N6K4 173 aa6.25□□□□□ -1.41
CHD8-213ENST00000557364 CLUHP3Q96NS8 147 aa6.25□□□□□ -1.41
CHD8-213ENST00000557364 LY6G6CO95867 125 aa6.25□□□□□ -1.41
CHD8-213ENST00000557364 ODF1Q14990 250 aa6.25□□□□□ -1.41
CHD8-213ENST00000557364 WFDC9Q8NEX5 89 aa6.25□□□□□ -1.41
CHD8-213ENST00000557364 UBE2D4Q9Y2X8 147 aa6.25□□□□□ -1.41
CHD8-213ENST00000557364 ANKRD11Q6UB99 2663 aaPredicted RBP6.25□□□□□ -1.41
CHD8-213ENST00000557364 BPY2O14599 106 aa6.24□□□□□ -1.41
CHD8-213ENST00000557364 C16orf95Q9H693 158 aa6.24□□□□□ -1.41
CHD8-213ENST00000557364 IGKV4-1P06312 121 aa6.24□□□□□ -1.41
CHD8-213ENST00000557364 ADAMTS20P59510 1910 aa6.24□□□□□ -1.41
CHD8-213ENST00000557364 BRI3O95415 125 aa6.24□□□□□ -1.41
CHD8-213ENST00000557364 IGKV2D-26A0A0A0MRZ7 120 aa6.23□□□□□ -1.41
CHD8-213ENST00000557364 TIMM17BO60830 172 aa6.23□□□□□ -1.41
CHD8-213ENST00000557364 NEXN-AS1Q8NBZ9 246 aa6.23□□□□□ -1.41
CHD8-213ENST00000557364 TRBV6-5A0A0K0K1A5 114 aa6.23□□□□□ -1.41
CHD8-213ENST00000557364 IGLC6P0CF74 106 aa6.23□□□□□ -1.41
CHD8-213ENST00000557364 MRPS36P82909 103 aaKnown RBP6.22□□□□□ -1.41
CHD8-213ENST00000557364 FAM110AQ9BQ89 295 aa6.22□□□□□ -1.41
CHD8-213ENST00000557364 M0R378 163 aa6.22□□□□□ -1.41
CHD8-213ENST00000557364 UBE2D3P61077 147 aa6.22□□□□□ -1.41
CHD8-213ENST00000557364 LINC00467Q9BRT7 94 aa6.22□□□□□ -1.41
CHD8-213ENST00000557364 LRCOL1A6NCL2 159 aa6.22□□□□□ -1.41
CHD8-213ENST00000557364 USP17L23D6RBM5 183 aa6.21□□□□□ -1.41
CHD8-213ENST00000557364 RPL28P46779 137 aaKnown RBP6.21□□□□□ -1.41
CHD8-213ENST00000557364 M0QY20 66 aa6.21□□□□□ -1.42
CHD8-213ENST00000557364 TRBV27A0A0K0K1C4 114 aa6.21□□□□□ -1.42
CHD8-213ENST00000557364 CHD8Q9HCK8 2581 aa6.21□□□□□ -1.42
CHD8-213ENST00000557364 A0A1B0GXF2 115 aa6.21□□□□□ -1.42
CHD8-213ENST00000557364 ZNF462Q96JM2 2506 aa6.21□□□□□ -1.42
CHD8-213ENST00000557364 EIF4EBP1Q13541 118 aaPredicted RBP6.2□□□□□ -1.42
CHD8-213ENST00000557364 TRBV30A0A0K0K1B3 111 aa6.2□□□□□ -1.42
CHD8-213ENST00000557364 PRR15LQ9BU68 103 aa6.2□□□□□ -1.42
CHD8-213ENST00000557364 COL4A3Q01955 1670 aa6.2□□□□□ -1.42
CHD8-213ENST00000557364 TRAV23DV6A0A075B6W5 121 aa6.2□□□□□ -1.42
CHD8-213ENST00000557364 KLLNB2CW77 178 aa6.2□□□□□ -1.42
CHD8-213ENST00000557364 G3V4G9 280 aa6.2□□□□□ -1.42
CHD8-213ENST00000557364 SPTSSBQ8NFR3 76 aa6.2□□□□□ -1.42
CHD8-213ENST00000557364 MLST8Q9BVC4 326 aa6.2□□□□□ -1.42
CHD8-213ENST00000557364 C11orf1Q9H5F2 150 aa6.2□□□□□ -1.42
CHD8-213ENST00000557364 U3KQK5 164 aa6.2□□□□□ -1.42
CHD8-213ENST00000557364 USP9XQ93008 2570 aaPredicted RBP6.2□□□□□ -1.42
CHD8-213ENST00000557364 IGHV4-30-4P0DP06 118 aa6.19□□□□□ -1.42
CHD8-213ENST00000557364 CRIP2P52943 208 aaPredicted RBP6.19□□□□□ -1.42
CHD8-213ENST00000557364 DAND5Q8N907 189 aa6.19□□□□□ -1.42
CHD8-213ENST00000557364 MUC4Q99102 2169 aa6.19□□□□□ -1.42
CHD8-213ENST00000557364 NDUFC2O95298 119 aa6.19□□□□□ -1.42
CHD8-213ENST00000557364 RBX1P62877 108 aa6.19□□□□□ -1.42
CHD8-213ENST00000557364 FAM19A5Q7Z5A7 132 aaPredicted RBP6.19□□□□□ -1.42
CHD8-213ENST00000557364 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.19□□□□□ -1.42
CHD8-213ENST00000557364 CDPF1Q6NVV7 123 aa6.19□□□□□ -1.42
CHD8-213ENST00000557364 IGLV4-3A0A075B6K6 122 aa6.18□□□□□ -1.42
CHD8-213ENST00000557364 ANKRD39Q53RE8 183 aa6.18□□□□□ -1.42
CHD8-213ENST00000557364 LINC00643Q86TS7 51 aa6.18□□□□□ -1.42
CHD8-213ENST00000557364 SPTBN4Q9H254 2564 aa6.18□□□□□ -1.42
CHD8-213ENST00000557364 A0A0J9YWU9 116 aa6.18□□□□□ -1.42
CHD8-213ENST00000557364 C20orf173Q96LM9 149 aa6.18□□□□□ -1.42
CHD8-213ENST00000557364 BBC3Q96PG8 261 aaPredicted RBP6.18□□□□□ -1.42
CHD8-213ENST00000557364 TP53TG3Q9ULZ0 132 aa6.18□□□□□ -1.42
CHD8-213ENST00000557364 IGLV1-51P01701 117 aa6.18□□□□□ -1.42
CHD8-213ENST00000557364 TMEM223A0PJW6 202 aa6.17□□□□□ -1.42
CHD8-213ENST00000557364 ASPHD1Q5U4P2 390 aa6.17□□□□□ -1.42
CHD8-213ENST00000557364 WISP2O76076 250 aa6.17□□□□□ -1.42
CHD8-213ENST00000557364 ZNF80P51504 273 aaPredicted RBP6.17□□□□□ -1.42
CHD8-213ENST00000557364 DEFB1P60022 68 aa6.17□□□□□ -1.42
CHD8-213ENST00000557364 C5orf47Q569G3 176 aa6.17□□□□□ -1.42
CHD8-213ENST00000557364 Q8IZM0 81 aa6.17□□□□□ -1.42
CHD8-213ENST00000557364 CDKN2A-AS1Q9UH64 79 aa6.16□□□□□ -1.42
CHD8-213ENST00000557364 DCANP1Q8TF63 244 aa6.16□□□□□ -1.42
CHD8-213ENST00000557364 C9orf85Q96MD7 179 aa6.16□□□□□ -1.42
CHD8-213ENST00000557364 C22orf34Q6ZV56 151 aa6.16□□□□□ -1.42
CHD8-213ENST00000557364 IGLV2-18A0A075B6J9 118 aa6.15□□□□□ -1.42
CHD8-213ENST00000557364 LINC00308Q8TCZ7 52 aa6.15□□□□□ -1.42
CHD8-213ENST00000557364 TAX1BP3O14907 124 aa6.15□□□□□ -1.42
CHD8-213ENST00000557364 ANKRD17O75179 2603 aaKnown RBP6.15□□□□□ -1.43
CHD8-213ENST00000557364 EGFEM1PQ0D2K5 195 aa6.15□□□□□ -1.43
CHD8-213ENST00000557364 IGLV5-52A0A0A0MRZ9 124 aa6.15□□□□□ -1.43
CHD8-213ENST00000557364 ATP5EP56381 51 aaPredicted RBP6.15□□□□□ -1.43
CHD8-213ENST00000557364 UBE2D2P62837 147 aa6.15□□□□□ -1.43
CHD8-213ENST00000557364 IGKV3D-7A0A0C4DH55 119 aa6.15□□□□□ -1.43
CHD8-213ENST00000557364 C10orf142B7Z368 130 aa6.15□□□□□ -1.43
CHD8-213ENST00000557364 MRPL55Q7Z7F7 128 aaKnown RBP6.15□□□□□ -1.43
CHD8-213ENST00000557364 FXYD2P54710 66 aa6.14□□□□□ -1.43
CHD8-213ENST00000557364 C10orf25Q5T742 122 aa6.14□□□□□ -1.43
CHD8-213ENST00000557364 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.14□□□□□ -1.43
CHD8-213ENST00000557364 RNF185Q96GF1 192 aa6.14□□□□□ -1.43
CHD8-213ENST00000557364 FRMD6-AS1P0C7T7 363 aa6.14□□□□□ -1.43
CHD8-213ENST00000557364 NANOS2P60321 138 aaKnown RBP6.14□□□□□ -1.43
CHD8-213ENST00000557364 PLAC8L1A1L4L8 177 aa6.14□□□□□ -1.43
CHD8-213ENST00000557364 ZNF22P17026 224 aaPredicted RBP6.14□□□□□ -1.43
CHD8-213ENST00000557364 FASNP49327 2511 aaKnown RBP6.14□□□□□ -1.43
CHD8-213ENST00000557364 CLEC2BQ92478 149 aa6.14□□□□□ -1.43
CHD8-213ENST00000557364 NDUFC1O43677 76 aa6.14□□□□□ -1.43
CHD8-213ENST00000557364 FAM236AA0A1B0GUQ0 79 aa6.13□□□□□ -1.43
CHD8-213ENST00000557364 LINC00959A0A1B0GUT2 108 aa6.13□□□□□ -1.43
CHD8-213ENST00000557364 FAM236BA0A1B0GV22 79 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms