RNA–Protein interactions for RNA: ENST00000554233.1

IFT43-207, Transcript of intraflagellar transport 43, humanhuman

TSL 3

Gene IFT43, Length 635 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-207ENST00000554233 TRBV7-3A0A075B6L6 115 aa3.06□□□□□ -1.92
IFT43-207ENST00000554233 TRAV9-2A0A087WT02 112 aa3.06□□□□□ -1.92
IFT43-207ENST00000554233 RBFOX3A6NFN3 312 aa3.06□□□□□ -1.92
IFT43-207ENST00000554233 CTRLP40313 264 aa3.06□□□□□ -1.92
IFT43-207ENST00000554233 GNG4P50150 75 aa3.06□□□□□ -1.92
IFT43-207ENST00000554233 UBE2D3P61077 147 aa3.06□□□□□ -1.92
IFT43-207ENST00000554233 UBE2D2P62837 147 aa3.06□□□□□ -1.92
IFT43-207ENST00000554233 ALKAL2Q6UX46 152 aa3.06□□□□□ -1.92
IFT43-207ENST00000554233 FAM231DQ6ZW35 169 aa3.06□□□□□ -1.92
IFT43-207ENST00000554233 VPS13BQ7Z7G8 4022 aa3.06□□□□□ -1.92
IFT43-207ENST00000554233 WFDC10BQ8IUB3 73 aa3.06□□□□□ -1.92
IFT43-207ENST00000554233 C14orf178Q8N769 122 aaPredicted RBP3.06□□□□□ -1.92
IFT43-207ENST00000554233 OR10AG1Q8NH19 301 aa3.06□□□□□ -1.92
IFT43-207ENST00000554233 ATP6V0E2Q8NHE4 81 aa3.06□□□□□ -1.92
IFT43-207ENST00000554233 CHCHD10Q8WYQ3 142 aaPredicted RBP3.06□□□□□ -1.92
IFT43-207ENST00000554233 FRZBQ92765 325 aa3.06□□□□□ -1.92
IFT43-207ENST00000554233 SMDT1Q9H4I9 107 aa3.06□□□□□ -1.92
IFT43-207ENST00000554233 SRRM2Q9UQ35 2752 aaKnown RBP3.06□□□□□ -1.92
IFT43-207ENST00000554233 IGLV4-3A0A075B6K6 122 aa3.05□□□□□ -1.92
IFT43-207ENST00000554233 A0A1B0GV50 99 aa3.05□□□□□ -1.92
IFT43-207ENST00000554233 GRIFINA4D1Z8 144 aa3.05□□□□□ -1.92
IFT43-207ENST00000554233 LRCOL1A6NCL2 159 aa3.05□□□□□ -1.92
IFT43-207ENST00000554233 EVI2AP22794 236 aa3.05□□□□□ -1.92
IFT43-207ENST00000554233 CACNG7P62955 275 aa3.05□□□□□ -1.92
IFT43-207ENST00000554233 RPL19P84098 196 aaKnown RBP3.05□□□□□ -1.92
IFT43-207ENST00000554233 CD164Q04900 197 aa3.05□□□□□ -1.92
IFT43-207ENST00000554233 OR10J3Q5JRS4 329 aa3.05□□□□□ -1.92
IFT43-207ENST00000554233 ADAMTSL4-AS1Q5T5F5 129 aa3.05□□□□□ -1.92
IFT43-207ENST00000554233 TEX261Q6UWH6 196 aa3.05□□□□□ -1.92
IFT43-207ENST00000554233 MED9Q9NWA0 146 aa3.05□□□□□ -1.92
IFT43-207ENST00000554233 TRAV8-6A0A0B4J262 113 aa3.04□□□□□ -1.92
IFT43-207ENST00000554233 M0QY20 66 aa3.04□□□□□ -1.92
IFT43-207ENST00000554233 M0R381 172 aa3.04□□□□□ -1.92
IFT43-207ENST00000554233 P01737 135 aa3.04□□□□□ -1.92
IFT43-207ENST00000554233 PFN2P35080 140 aa3.04□□□□□ -1.92
IFT43-207ENST00000554233 KRTAP10-12P60413 245 aa3.04□□□□□ -1.92
IFT43-207ENST00000554233 TMEM97Q5BJF2 176 aa3.04□□□□□ -1.92
IFT43-207ENST00000554233 LCE1FQ5T754 118 aa3.04□□□□□ -1.92
IFT43-207ENST00000554233 MRPL55Q7Z7F7 128 aaKnown RBP3.04□□□□□ -1.92
IFT43-207ENST00000554233 DAZ4Q86SG3 579 aaKnown RBP3.04□□□□□ -1.92
IFT43-207ENST00000554233 LINC01551Q86U37 167 aa3.04□□□□□ -1.92
IFT43-207ENST00000554233 NIT1Q86X76 327 aa3.04□□□□□ -1.92
IFT43-207ENST00000554233 FER1L6-AS1Q8NA97 138 aa3.04□□□□□ -1.92
IFT43-207ENST00000554233 OR2D3Q8NGH3 330 aa3.04□□□□□ -1.92
IFT43-207ENST00000554233 DNAJC30Q96LL9 226 aa3.04□□□□□ -1.92
IFT43-207ENST00000554233 AP1S3Q96PC3 154 aa3.04□□□□□ -1.92
IFT43-207ENST00000554233 GFRA4Q9GZZ7 299 aa3.04□□□□□ -1.92
IFT43-207ENST00000554233 DAZ3Q9NR90 486 aaKnown RBP3.04□□□□□ -1.92
IFT43-207ENST00000554233 FAT1Q14517 4588 aa3.03□□□□□ -1.92
IFT43-207ENST00000554233 A0A087WTM6 91 aa3.03□□□□□ -1.92
IFT43-207ENST00000554233 TMSB15BA0A087X1C1 80 aa3.03□□□□□ -1.92
IFT43-207ENST00000554233 TRBV6-8A0A0A6YYG3 113 aa3.03□□□□□ -1.92
IFT43-207ENST00000554233 TRAV8-3A0A0A6YYJ7 113 aa3.03□□□□□ -1.92
IFT43-207ENST00000554233 IGHV3-73A0A0B4J1V6 119 aa3.03□□□□□ -1.92
IFT43-207ENST00000554233 RPL37AP8A6NKH3 93 aa3.03□□□□□ -1.92
IFT43-207ENST00000554233 A8MWL6 223 aa3.03□□□□□ -1.92
IFT43-207ENST00000554233 SRP19P09132 144 aaKnown RBP3.03□□□□□ -1.92
IFT43-207ENST00000554233 CFC1BP0CG36 223 aa3.03□□□□□ -1.92
IFT43-207ENST00000554233 CFC1P0CG37 223 aa3.03□□□□□ -1.92
IFT43-207ENST00000554233 NTF3P20783 257 aa3.03□□□□□ -1.92
IFT43-207ENST00000554233 RAB14P61106 215 aa3.03□□□□□ -1.92
IFT43-207ENST00000554233 PKIAP61925 76 aa3.03□□□□□ -1.92
IFT43-207ENST00000554233 IQCJQ1A5X6 159 aa3.03□□□□□ -1.92
IFT43-207ENST00000554233 SPANXN1Q5VSR9 72 aa3.03□□□□□ -1.92
IFT43-207ENST00000554233 LYZL1Q6UWQ5 148 aa3.03□□□□□ -1.92
IFT43-207ENST00000554233 NTM-AS1Q6ZSK4 140 aa3.03□□□□□ -1.92
IFT43-207ENST00000554233 GTSF1Q8WW33 167 aa3.03□□□□□ -1.92
IFT43-207ENST00000554233 RPP21Q9H633 154 aaKnown RBP3.03□□□□□ -1.92
IFT43-207ENST00000554233 OSTCQ9NRP0 149 aa3.03□□□□□ -1.92
IFT43-207ENST00000554233 PRR34Q9NV39 138 aa3.03□□□□□ -1.92
IFT43-207ENST00000554233 PYGO1Q9Y3Y4 419 aa3.03□□□□□ -1.92
IFT43-207ENST00000554233 ABCA13Q86UQ4 5058 aa3.02□□□□□ -1.93
IFT43-207ENST00000554233 FAM240AA0A1B0GVK7 77 aa3.02□□□□□ -1.93
IFT43-207ENST00000554233 H7C1H1 209 aa3.02□□□□□ -1.93
IFT43-207ENST00000554233 TRGC1P0CF51 173 aa3.02□□□□□ -1.93
IFT43-207ENST00000554233 GZMBP10144 247 aa3.02□□□□□ -1.93
IFT43-207ENST00000554233 LINC01547P58512 204 aaPredicted RBP3.02□□□□□ -1.93
IFT43-207ENST00000554233 FAM74A4Q5TZK3 123 aa3.02□□□□□ -1.93
IFT43-207ENST00000554233 TSKUQ8WUA8 353 aa3.02□□□□□ -1.93
IFT43-207ENST00000554233 SMIM7Q9BQ49 75 aa3.02□□□□□ -1.93
IFT43-207ENST00000554233 RNASE7Q9H1E1 156 aaKnown RBP3.02□□□□□ -1.93
IFT43-207ENST00000554233 DPH3P1Q9H4G8 78 aa3.02□□□□□ -1.93
IFT43-207ENST00000554233 NIT2Q9NQR4 276 aa3.02□□□□□ -1.93
IFT43-207ENST00000554233 TRBV6-5A0A0K0K1A5 114 aa3.01□□□□□ -1.93
IFT43-207ENST00000554233 C16orf90A8MZG2 172 aa3.01□□□□□ -1.93
IFT43-207ENST00000554233 C9JQL5 133 aa3.01□□□□□ -1.93
IFT43-207ENST00000554233 Q0VG73 95 aa3.01□□□□□ -1.93
IFT43-207ENST00000554233 ELOBQ15370 118 aa3.01□□□□□ -1.93
IFT43-207ENST00000554233 KRTAP26-1Q6PEX3 210 aa3.01□□□□□ -1.93
IFT43-207ENST00000554233 RASL11AQ6T310 242 aa3.01□□□□□ -1.93
IFT43-207ENST00000554233 REG3GQ6UW15 175 aa3.01□□□□□ -1.93
IFT43-207ENST00000554233 Q6ZSA8 131 aa3.01□□□□□ -1.93
IFT43-207ENST00000554233 SPATA12Q7Z6I5 190 aa3.01□□□□□ -1.93
IFT43-207ENST00000554233 GATD1Q8NB37 220 aa3.01□□□□□ -1.93
IFT43-207ENST00000554233 PACRGQ96M98 296 aaPredicted RBP3.01□□□□□ -1.93
IFT43-207ENST00000554233 CHCHD5Q9BSY4 110 aa3.01□□□□□ -1.93
IFT43-207ENST00000554233 EIF5A2Q9GZV4 153 aaKnown RBP3.01□□□□□ -1.93
IFT43-207ENST00000554233 V9GYV3 84 aa3.01□□□□□ -1.93
IFT43-207ENST00000554233 TRBV27A0A0K0K1C4 114 aa3□□□□□ -1.93
IFT43-207ENST00000554233 SMIM27A0A1W2PRY6 76 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms