RNA–Protein interactions for RNA: ENST00000553709.5

ARHGEF40-202, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 5,204 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-202ENST00000553709 LINC00308Q8TCZ7 52 aa11.39□□□□□ -0.59
ARHGEF40-202ENST00000553709 NAV3Q8IVL0 2385 aa11.39□□□□□ -0.59
ARHGEF40-202ENST00000553709 TEX49A0A1B0GTD5 131 aa11.38□□□□□ -0.59
ARHGEF40-202ENST00000553709 PDE6GP18545 87 aa11.38□□□□□ -0.59
ARHGEF40-202ENST00000553709 PROK1P58294 105 aa11.38□□□□□ -0.59
ARHGEF40-202ENST00000553709 UFSP1Q6NVU6 142 aa11.38□□□□□ -0.59
ARHGEF40-202ENST00000553709 LYRM9A8MSI8 78 aa11.38□□□□□ -0.59
ARHGEF40-202ENST00000553709 COX7BP24311 80 aa11.38□□□□□ -0.59
ARHGEF40-202ENST00000553709 PYGO1Q9Y3Y4 419 aa11.38□□□□□ -0.59
ARHGEF40-202ENST00000553709 NDUFC2O95298 119 aa11.38□□□□□ -0.59
ARHGEF40-202ENST00000553709 HIGD2BQ4VC39 106 aa11.37□□□□□ -0.59
ARHGEF40-202ENST00000553709 KLLNB2CW77 178 aa11.37□□□□□ -0.59
ARHGEF40-202ENST00000553709 CHCHD10Q8WYQ3 142 aaPredicted RBP11.37□□□□□ -0.59
ARHGEF40-202ENST00000553709 SORL1Q92673 2214 aa11.37□□□□□ -0.59
ARHGEF40-202ENST00000553709 MT-ATP8P03928 68 aa11.37□□□□□ -0.59
ARHGEF40-202ENST00000553709 PSMG3-AS1Q96PY0 264 aa11.36□□□□□ -0.59
ARHGEF40-202ENST00000553709 IL17DQ8TAD2 202 aa11.36□□□□□ -0.59
ARHGEF40-202ENST00000553709 TRIAP1O43715 76 aa11.36□□□□□ -0.59
ARHGEF40-202ENST00000553709 C2CD3Q4AC94 2353 aa11.36□□□□□ -0.59
ARHGEF40-202ENST00000553709 TSHBP01222 138 aa11.36□□□□□ -0.59
ARHGEF40-202ENST00000553709 TRBV6-4A0A1B0GX49 114 aa11.35□□□□□ -0.59
ARHGEF40-202ENST00000553709 LINC00310P59036 64 aa11.35□□□□□ -0.59
ARHGEF40-202ENST00000553709 CEP295Q9C0D2 2601 aa11.35□□□□□ -0.59
ARHGEF40-202ENST00000553709 C5orf42Q9H799 3197 aa11.35□□□□□ -0.59
ARHGEF40-202ENST00000553709 TRANK1O15050 2925 aa11.35□□□□□ -0.59
ARHGEF40-202ENST00000553709 TRBV30A0A0K0K1B3 111 aa11.35□□□□□ -0.59
ARHGEF40-202ENST00000553709 IBA57-AS1B1ANH7 110 aa11.35□□□□□ -0.59
ARHGEF40-202ENST00000553709 ZNF702PQ9H963 129 aa11.35□□□□□ -0.59
ARHGEF40-202ENST00000553709 TRBV6-8A0A0A6YYG3 113 aa11.35□□□□□ -0.59
ARHGEF40-202ENST00000553709 NDUFB1O75438 58 aa11.35□□□□□ -0.59
ARHGEF40-202ENST00000553709 GAS8-AS1O95177 125 aa11.35□□□□□ -0.59
ARHGEF40-202ENST00000553709 C5orf47Q569G3 176 aa11.35□□□□□ -0.59
ARHGEF40-202ENST00000553709 CNFNQ9BYD5 112 aa11.35□□□□□ -0.59
ARHGEF40-202ENST00000553709 MKI67P46013 3256 aaKnown RBP11.35□□□□□ -0.59
ARHGEF40-202ENST00000553709 UBE2AP49459 152 aa11.34□□□□□ -0.59
ARHGEF40-202ENST00000553709 IGLV1-40P01703 118 aa11.34□□□□□ -0.59
ARHGEF40-202ENST00000553709 POLR2KP53803 58 aaKnown RBP11.34□□□□□ -0.59
ARHGEF40-202ENST00000553709 MP68P56378 58 aa11.34□□□□□ -0.59
ARHGEF40-202ENST00000553709 RANBP2P49792 3224 aaKnown RBP11.34□□□□□ -0.59
ARHGEF40-202ENST00000553709 PIK3CD-AS1Q5SR53 167 aa11.34□□□□□ -0.59
ARHGEF40-202ENST00000553709 MYO18BQ8IUG5 2567 aa11.33□□□□□ -0.59
ARHGEF40-202ENST00000553709 CCDC168Q8NDH2 2452 aa11.33□□□□□ -0.6
ARHGEF40-202ENST00000553709 BRCA2P51587 3418 aa11.33□□□□□ -0.6
ARHGEF40-202ENST00000553709 CLUHP3Q96NS8 147 aa11.33□□□□□ -0.6
ARHGEF40-202ENST00000553709 INAFM1C9JVW0 142 aa11.32□□□□□ -0.6
ARHGEF40-202ENST00000553709 NDUFV3P56181 108 aaKnown RBP11.32□□□□□ -0.6
ARHGEF40-202ENST00000553709 C9orf85Q96MD7 179 aa11.32□□□□□ -0.6
ARHGEF40-202ENST00000553709 HIVEP3Q5T1R4 2406 aa11.32□□□□□ -0.6
ARHGEF40-202ENST00000553709 CDSNQ15517 529 aa11.32□□□□□ -0.6
ARHGEF40-202ENST00000553709 Q6ZS46 218 aa11.32□□□□□ -0.6
ARHGEF40-202ENST00000553709 C11orf45Q8TAV5 145 aa11.32□□□□□ -0.6
ARHGEF40-202ENST00000553709 BRK1Q8WUW1 75 aa11.32□□□□□ -0.6
ARHGEF40-202ENST00000553709 MRPS12O15235 138 aaKnown RBP11.32□□□□□ -0.6
ARHGEF40-202ENST00000553709 CRYGDP07320 174 aa11.32□□□□□ -0.6
ARHGEF40-202ENST00000553709 DCANP1Q8TF63 244 aa11.32□□□□□ -0.6
ARHGEF40-202ENST00000553709 PRB2P02812 416 aaPredicted RBP11.31□□□□□ -0.6
ARHGEF40-202ENST00000553709 A8MZ25 164 aa11.31□□□□□ -0.6
ARHGEF40-202ENST00000553709 Q8N976 141 aa11.3□□□□□ -0.6
ARHGEF40-202ENST00000553709 TIMM17BO60830 172 aa11.3□□□□□ -0.6
ARHGEF40-202ENST00000553709 URB1-AS1Q96HZ7 61 aa11.3□□□□□ -0.6
ARHGEF40-202ENST00000553709 UBE2D4Q9Y2X8 147 aa11.28□□□□□ -0.6
ARHGEF40-202ENST00000553709 ANKRD11Q6UB99 2663 aaPredicted RBP11.28□□□□□ -0.6
ARHGEF40-202ENST00000553709 SHISA2Q6UWI4 295 aa11.28□□□□□ -0.6
ARHGEF40-202ENST00000553709 LINC00482Q8N8I6 264 aa11.28□□□□□ -0.6
ARHGEF40-202ENST00000553709 UPK3BQ9BT76 320 aa11.28□□□□□ -0.6
ARHGEF40-202ENST00000553709 SLPIP03973 132 aa11.27□□□□□ -0.6
ARHGEF40-202ENST00000553709 WFDC9Q8NEX5 89 aa11.27□□□□□ -0.61
ARHGEF40-202ENST00000553709 TRAV23DV6A0A075B6W5 121 aa11.27□□□□□ -0.61
ARHGEF40-202ENST00000553709 MIFP14174 115 aa11.27□□□□□ -0.61
ARHGEF40-202ENST00000553709 C18orf65Q6ZTR6 163 aa11.27□□□□□ -0.61
ARHGEF40-202ENST00000553709 ARHGAP32A7KAX9 2087 aa11.27□□□□□ -0.61
ARHGEF40-202ENST00000553709 BPTFQ12830 3046 aa11.26□□□□□ -0.61
ARHGEF40-202ENST00000553709 SDIM1Q6ZPB5 146 aa11.26□□□□□ -0.61
ARHGEF40-202ENST00000553709 MRPS36P82909 103 aaKnown RBP11.26□□□□□ -0.61
ARHGEF40-202ENST00000553709 MYO9AB2RTY4 2548 aa11.25□□□□□ -0.61
ARHGEF40-202ENST00000553709 BBC3Q96PG8 261 aaPredicted RBP11.25□□□□□ -0.61
ARHGEF40-202ENST00000553709 IGKV2-24A0A0C4DH68 120 aa11.24□□□□□ -0.61
ARHGEF40-202ENST00000553709 BPY2O14599 106 aa11.24□□□□□ -0.61
ARHGEF40-202ENST00000553709 PRM2P04554 102 aa11.24□□□□□ -0.61
ARHGEF40-202ENST00000553709 LINC01006Q8NI28 216 aa11.24□□□□□ -0.61
ARHGEF40-202ENST00000553709 PCSK5Q92824 1860 aa11.24□□□□□ -0.61
ARHGEF40-202ENST00000553709 DEFB131BA0A096LNP1 70 aa11.24□□□□□ -0.61
ARHGEF40-202ENST00000553709 LY6G6DO95868 133 aa11.23□□□□□ -0.61
ARHGEF40-202ENST00000553709 IGIPA6NJ69 53 aa11.23□□□□□ -0.61
ARHGEF40-202ENST00000553709 XAGE1AQ9HD64 81 aa11.23□□□□□ -0.61
ARHGEF40-202ENST00000553709 UBE2D1P51668 147 aa11.23□□□□□ -0.61
ARHGEF40-202ENST00000553709 FAM110AQ9BQ89 295 aa11.23□□□□□ -0.61
ARHGEF40-202ENST00000553709 PTPRBP23467 1997 aa11.23□□□□□ -0.61
ARHGEF40-202ENST00000553709 C6orf99Q4VX62 202 aa11.22□□□□□ -0.61
ARHGEF40-202ENST00000553709 PLA2G2AP14555 144 aa11.22□□□□□ -0.61
ARHGEF40-202ENST00000553709 ATP5EP2Q5VTU8 51 aa11.22□□□□□ -0.61
ARHGEF40-202ENST00000553709 WFDC10AQ9H1F0 79 aa11.22□□□□□ -0.61
ARHGEF40-202ENST00000553709 AVPP01185 164 aa11.22□□□□□ -0.61
ARHGEF40-202ENST00000553709 ABCA2Q9BZC7 2435 aa11.22□□□□□ -0.61
ARHGEF40-202ENST00000553709 LOC100131303A0A0U1RQF7 123 aa11.22□□□□□ -0.61
ARHGEF40-202ENST00000553709 LST1O00453 97 aa11.22□□□□□ -0.61
ARHGEF40-202ENST00000553709 UQCRQO14949 82 aa11.22□□□□□ -0.61
ARHGEF40-202ENST00000553709 C14orf177Q52M58 125 aa11.22□□□□□ -0.61
ARHGEF40-202ENST00000553709 HIGD2AQ9BW72 106 aa11.21□□□□□ -0.61
ARHGEF40-202ENST00000553709 CD164L2Q6UWJ8 174 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms