RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 A0A1W2PPM0 123 aa9.95□□□□□ -0.82
RAB3IP-216ENST00000552199 OR5A1Q8NGJ0 315 aa9.95□□□□□ -0.82
RAB3IP-216ENST00000552199 TRGV4A0A0C4DH28 118 aa9.95□□□□□ -0.82
RAB3IP-216ENST00000552199 GAGE10A6NGK3 116 aa9.95□□□□□ -0.82
RAB3IP-216ENST00000552199 SRSF9Q13242 221 aaKnown RBP eCLIP9.95□□□□□ -0.82
RAB3IP-216ENST00000552199 SAMD5Q5TGI4 173 aa9.95□□□□□ -0.82
RAB3IP-216ENST00000552199 DGAT2L7PQ6IED9 249 aa9.95□□□□□ -0.82
RAB3IP-216ENST00000552199 IGHV3-64A0A075B6Q5 118 aa9.94□□□□□ -0.82
RAB3IP-216ENST00000552199 A0A1B0GWB2 263 aa9.94□□□□□ -0.82
RAB3IP-216ENST00000552199 UBE2D1P51668 147 aa9.94□□□□□ -0.82
RAB3IP-216ENST00000552199 FHL2Q14192 279 aa9.94□□□□□ -0.82
RAB3IP-216ENST00000552199 SBSPONQ8IVN8 264 aa9.94□□□□□ -0.82
RAB3IP-216ENST00000552199 SPANXB1Q9NS25 103 aaPredicted RBP9.94□□□□□ -0.82
RAB3IP-216ENST00000552199 LINC00694P0DN24 101 aa9.94□□□□□ -0.82
RAB3IP-216ENST00000552199 GTF2H5Q6ZYL4 71 aa9.94□□□□□ -0.82
RAB3IP-216ENST00000552199 KIR2DL5BQ8NHK3 375 aa9.94□□□□□ -0.82
RAB3IP-216ENST00000552199 GTSF1LQ9H1H1 148 aa9.94□□□□□ -0.82
RAB3IP-216ENST00000552199 F8P00451 2351 aa9.93□□□□□ -0.82
RAB3IP-216ENST00000552199 VWFP04275 2813 aa9.93□□□□□ -0.82
RAB3IP-216ENST00000552199 LOC100131303A0A0U1RQF7 123 aa9.93□□□□□ -0.82
RAB3IP-216ENST00000552199 CSDC2Q9Y534 153 aaKnown RBP9.93□□□□□ -0.82
RAB3IP-216ENST00000552199 X6R8D5 127 aa9.93□□□□□ -0.82
RAB3IP-216ENST00000552199 SMIM9A6NGZ8 99 aa9.92□□□□□ -0.82
RAB3IP-216ENST00000552199 K7EP34 96 aa9.92□□□□□ -0.82
RAB3IP-216ENST00000552199 IGHV3-30-3P0DP02 117 aa9.92□□□□□ -0.82
RAB3IP-216ENST00000552199 FABP2P12104 132 aa9.92□□□□□ -0.82
RAB3IP-216ENST00000552199 LINC00612Q8N6U2 182 aa9.92□□□□□ -0.82
RAB3IP-216ENST00000552199 TENM1Q9UKZ4 2725 aa9.92□□□□□ -0.82
RAB3IP-216ENST00000552199 IGHV1-58A0A0C4DH39 117 aa9.92□□□□□ -0.82
RAB3IP-216ENST00000552199 TMEM238LA0A1B0GVL6 79 aa9.92□□□□□ -0.82
RAB3IP-216ENST00000552199 A6NJY4 79 aa9.92□□□□□ -0.82
RAB3IP-216ENST00000552199 IGLL5B9A064 214 aa9.92□□□□□ -0.82
RAB3IP-216ENST00000552199 TIRAPP58753 221 aa9.92□□□□□ -0.82
RAB3IP-216ENST00000552199 SMAGPQ0VAQ4 97 aa9.92□□□□□ -0.82
RAB3IP-216ENST00000552199 GEMIN7Q9H840 131 aaKnown RBP9.92□□□□□ -0.82
RAB3IP-216ENST00000552199 MAST4O15021 2626 aa9.92□□□□□ -0.82
RAB3IP-216ENST00000552199 TRAV8-3A0A0A6YYJ7 113 aa9.91□□□□□ -0.82
RAB3IP-216ENST00000552199 WFDC9Q8NEX5 89 aa9.91□□□□□ -0.82
RAB3IP-216ENST00000552199 TEP1Q99973 2627 aaKnown RBP9.9□□□□□ -0.82
RAB3IP-216ENST00000552199 IGHV3-30P01768 117 aa9.9□□□□□ -0.82
RAB3IP-216ENST00000552199 IGHV3-30-5P0DP03 117 aa9.9□□□□□ -0.82
RAB3IP-216ENST00000552199 DEFB130BP0DP73 79 aa9.9□□□□□ -0.82
RAB3IP-216ENST00000552199 DEFB130AP0DP74 79 aa9.9□□□□□ -0.82
RAB3IP-216ENST00000552199 TMEM243Q9BU79 118 aa9.9□□□□□ -0.82
RAB3IP-216ENST00000552199 SPCS1Q9Y6A9 102 aa9.9□□□□□ -0.82
RAB3IP-216ENST00000552199 IGLV5-45A0A087WSX0 123 aa9.9□□□□□ -0.83
RAB3IP-216ENST00000552199 FAM19A3Q7Z5A8 133 aa9.9□□□□□ -0.83
RAB3IP-216ENST00000552199 VSIG2Q96IQ7 327 aa9.9□□□□□ -0.83
RAB3IP-216ENST00000552199 SPINK8P0C7L1 97 aa9.89□□□□□ -0.83
RAB3IP-216ENST00000552199 C10orf126Q8N4M7 172 aa9.89□□□□□ -0.83
RAB3IP-216ENST00000552199 CDC42SE2Q9NRR3 84 aa9.89□□□□□ -0.83
RAB3IP-216ENST00000552199 H7C423 109 aa9.88□□□□□ -0.83
RAB3IP-216ENST00000552199 CDKN2A-AS1Q9UH64 79 aa9.88□□□□□ -0.83
RAB3IP-216ENST00000552199 A0A0J9YXY3 114 aa9.88□□□□□ -0.83
RAB3IP-216ENST00000552199 CYSRT1A8MQ03 144 aa9.88□□□□□ -0.83
RAB3IP-216ENST00000552199 UBE2L6O14933 153 aa9.88□□□□□ -0.83
RAB3IP-216ENST00000552199 APOC4P55056 127 aa9.88□□□□□ -0.83
RAB3IP-216ENST00000552199 COX6A2Q02221 97 aa9.88□□□□□ -0.83
RAB3IP-216ENST00000552199 LINC00242Q5T6M2 205 aa9.88□□□□□ -0.83
RAB3IP-216ENST00000552199 WIPF1O43516 503 aa9.87□□□□□ -0.83
RAB3IP-216ENST00000552199 HERVK_113P63121 156 aa9.87□□□□□ -0.83
RAB3IP-216ENST00000552199 TMEM101Q96IK0 257 aa9.87□□□□□ -0.83
RAB3IP-216ENST00000552199 NDUFA12Q9UI09 145 aa9.86□□□□□ -0.83
RAB3IP-216ENST00000552199 ATRQ13535 2644 aa9.86□□□□□ -0.83
RAB3IP-216ENST00000552199 TMEM238C9JI98 176 aa9.86□□□□□ -0.83
RAB3IP-216ENST00000552199 DEFB135Q30KP9 77 aa9.86□□□□□ -0.83
RAB3IP-216ENST00000552199 TRBV6-8A0A0A6YYG3 113 aa9.85□□□□□ -0.83
RAB3IP-216ENST00000552199 LYRM9A8MSI8 78 aa9.85□□□□□ -0.83
RAB3IP-216ENST00000552199 A8MZ25 164 aa9.85□□□□□ -0.83
RAB3IP-216ENST00000552199 TRAV13-1A0A0B4J241 112 aa9.84□□□□□ -0.83
RAB3IP-216ENST00000552199 APOMO95445 188 aa9.84□□□□□ -0.83
RAB3IP-216ENST00000552199 FAM222AQ5U5X8 452 aa9.84□□□□□ -0.83
RAB3IP-216ENST00000552199 ZFAND6Q6FIF0 208 aa9.84□□□□□ -0.83
RAB3IP-216ENST00000552199 CFC1BP0CG36 223 aa9.84□□□□□ -0.83
RAB3IP-216ENST00000552199 CFC1P0CG37 223 aa9.84□□□□□ -0.83
RAB3IP-216ENST00000552199 MUSTN1Q8IVN3 82 aa9.84□□□□□ -0.83
RAB3IP-216ENST00000552199 LITAFQ99732 161 aa9.84□□□□□ -0.83
RAB3IP-216ENST00000552199 PGPEP1Q9NXJ5 209 aa9.84□□□□□ -0.83
RAB3IP-216ENST00000552199 IGLV5-39A0A0G2JS06 123 aa9.83□□□□□ -0.84
RAB3IP-216ENST00000552199 GYPEP15421 78 aa9.83□□□□□ -0.84
RAB3IP-216ENST00000552199 GAGE6Q13070 117 aa9.83□□□□□ -0.84
RAB3IP-216ENST00000552199 PRO0255Q9UI72 69 aa9.82□□□□□ -0.84
RAB3IP-216ENST00000552199 IGHV4-28A0A0C4DH34 117 aa9.82□□□□□ -0.84
RAB3IP-216ENST00000552199 RPL24P83731 157 aaKnown RBP9.82□□□□□ -0.84
RAB3IP-216ENST00000552199 ATP6V0E2Q8NHE4 81 aa9.82□□□□□ -0.84
RAB3IP-216ENST00000552199 A4D1N5 150 aa9.81□□□□□ -0.84
RAB3IP-216ENST00000552199 TSPAN13O95857 204 aa9.81□□□□□ -0.84
RAB3IP-216ENST00000552199 CHCHD5Q9BSY4 110 aa9.81□□□□□ -0.84
RAB3IP-216ENST00000552199 SPANXDQ9BXN6 97 aa9.81□□□□□ -0.84
RAB3IP-216ENST00000552199 SPANXCQ9NY87 97 aa9.81□□□□□ -0.84
RAB3IP-216ENST00000552199 SMIM1B2RUZ4 78 aa9.8□□□□□ -0.84
RAB3IP-216ENST00000552199 NDUFA1O15239 70 aa9.8□□□□□ -0.84
RAB3IP-216ENST00000552199 DEFB4AO15263 64 aa9.8□□□□□ -0.84
RAB3IP-216ENST00000552199 IGHV4-30-4P0DP06 118 aa9.8□□□□□ -0.84
RAB3IP-216ENST00000552199 NBEAL2Q6ZNJ1 2754 aa9.8□□□□□ -0.84
RAB3IP-216ENST00000552199 IGLV4-60A0A075B6I1 120 aa9.8□□□□□ -0.84
RAB3IP-216ENST00000552199 F5H768 121 aa9.8□□□□□ -0.84
RAB3IP-216ENST00000552199 TIMM17BO60830 172 aa9.8□□□□□ -0.84
RAB3IP-216ENST00000552199 MIFP14174 115 aa9.8□□□□□ -0.84
RAB3IP-216ENST00000552199 ADAMTSL4-AS1Q5T5F5 129 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 126.3 ms