RNA–Protein interactions for RNA: ENST00000551544.5

CACNB3-219, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 2,825 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-219ENST00000551544 ADAMTSL4-AS1Q5T5F5 129 aa9.43□□□□□ -0.9
CACNB3-219ENST00000551544 GAGE5Q13069 117 aa9.42□□□□□ -0.9
CACNB3-219ENST00000551544 GAGE6Q13070 117 aa9.42□□□□□ -0.9
CACNB3-219ENST00000551544 ATXN8Q156A1 80 aa9.42□□□□□ -0.9
CACNB3-219ENST00000551544 VSIG2Q96IQ7 327 aa9.42□□□□□ -0.9
CACNB3-219ENST00000551544 LITAFQ99732 161 aa9.42□□□□□ -0.9
CACNB3-219ENST00000551544 NOTCH3Q9UM47 2321 aa9.41□□□□□ -0.9
CACNB3-219ENST00000551544 EPG5Q9HCE0 2579 aa9.41□□□□□ -0.9
CACNB3-219ENST00000551544 B5MCH6 92 aa9.41□□□□□ -0.9
CACNB3-219ENST00000551544 RPL13AP40429 203 aaKnown RBP9.41□□□□□ -0.9
CACNB3-219ENST00000551544 ODF3L2Q3SX64 289 aa9.41□□□□□ -0.9
CACNB3-219ENST00000551544 RS1O15537 224 aa9.41□□□□□ -0.9
CACNB3-219ENST00000551544 BEAN1Q3B7T3 259 aa9.41□□□□□ -0.9
CACNB3-219ENST00000551544 LINC01620Q4KN68 170 aa9.41□□□□□ -0.9
CACNB3-219ENST00000551544 DGAT2L7PQ6IED9 249 aa9.41□□□□□ -0.9
CACNB3-219ENST00000551544 Q6ZSV7 163 aa9.41□□□□□ -0.9
CACNB3-219ENST00000551544 STHQ8IWL8 128 aa9.41□□□□□ -0.9
CACNB3-219ENST00000551544 TRGV1A0A0A0MS02 117 aa9.41□□□□□ -0.9
CACNB3-219ENST00000551544 Q6Q795 121 aa9.41□□□□□ -0.9
CACNB3-219ENST00000551544 DNAJC30Q96LL9 226 aa9.41□□□□□ -0.9
CACNB3-219ENST00000551544 CHD6Q8TD26 2715 aa9.4□□□□□ -0.9
CACNB3-219ENST00000551544 TRBV30A0A0K0K1B3 111 aa9.4□□□□□ -0.9
CACNB3-219ENST00000551544 SNCGO76070 127 aa9.4□□□□□ -0.9
CACNB3-219ENST00000551544 NHLRC4P0CG21 123 aaPredicted RBP9.4□□□□□ -0.9
CACNB3-219ENST00000551544 CDKN2A-AS1Q9UH64 79 aa9.4□□□□□ -0.9
CACNB3-219ENST00000551544 CUBNO60494 3623 aa9.4□□□□□ -0.9
CACNB3-219ENST00000551544 GAGE2BQ13066 116 aa9.4□□□□□ -0.91
CACNB3-219ENST00000551544 GAGE2EQ4V326 116 aa9.4□□□□□ -0.91
CACNB3-219ENST00000551544 ZNF843Q8N446 348 aa9.4□□□□□ -0.91
CACNB3-219ENST00000551544 NTN5Q8WTR8 489 aaPredicted RBP9.4□□□□□ -0.91
CACNB3-219ENST00000551544 GAGE2DQ9UEU5 116 aa9.4□□□□□ -0.91
CACNB3-219ENST00000551544 TRBV10-2A0A0K0K1G8 114 aa9.39□□□□□ -0.91
CACNB3-219ENST00000551544 C1orf158Q8N1D5 194 aa9.39□□□□□ -0.91
CACNB3-219ENST00000551544 DAND5Q8N907 189 aa9.38□□□□□ -0.91
CACNB3-219ENST00000551544 ZNF469Q96JG9 3925 aaPredicted RBP9.38□□□□□ -0.91
CACNB3-219ENST00000551544 TRIAP1O43715 76 aa9.38□□□□□ -0.91
CACNB3-219ENST00000551544 NDUFV3P56181 108 aaKnown RBP9.38□□□□□ -0.91
CACNB3-219ENST00000551544 MIAQ16674 131 aa9.37□□□□□ -0.91
CACNB3-219ENST00000551544 LRRC75A-AS1Q8N1F1 130 aa9.37□□□□□ -0.91
CACNB3-219ENST00000551544 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.37□□□□□ -0.91
CACNB3-219ENST00000551544 TRAV4A0A0B4J268 109 aa9.37□□□□□ -0.91
CACNB3-219ENST00000551544 DNAJC9-AS1A6NH13 148 aa9.37□□□□□ -0.91
CACNB3-219ENST00000551544 COX6A2Q02221 97 aa9.37□□□□□ -0.91
CACNB3-219ENST00000551544 KRTAP1-3Q8IUG1 177 aa9.37□□□□□ -0.91
CACNB3-219ENST00000551544 SPANXDQ9BXN6 97 aa9.37□□□□□ -0.91
CACNB3-219ENST00000551544 SPANXCQ9NY87 97 aa9.37□□□□□ -0.91
CACNB3-219ENST00000551544 UBR5O95071 2799 aaPredicted RBP9.37□□□□□ -0.91
CACNB3-219ENST00000551544 CCDC168Q8NDH2 2452 aa9.37□□□□□ -0.91
CACNB3-219ENST00000551544 SETD2Q9BYW2 2564 aaPredicted RBP9.36□□□□□ -0.91
CACNB3-219ENST00000551544 TRAV8-4A0A0B4J246 113 aa9.36□□□□□ -0.91
CACNB3-219ENST00000551544 CCL24O00175 119 aa9.36□□□□□ -0.91
CACNB3-219ENST00000551544 CRLF1O75462 422 aa9.36□□□□□ -0.91
CACNB3-219ENST00000551544 NDUFA7O95182 113 aa9.36□□□□□ -0.91
CACNB3-219ENST00000551544 LINC00694P0DN24 101 aa9.36□□□□□ -0.91
CACNB3-219ENST00000551544 Q6ZTI0 123 aa9.36□□□□□ -0.91
CACNB3-219ENST00000551544 TMEM101Q96IK0 257 aa9.36□□□□□ -0.91
CACNB3-219ENST00000551544 C2CD3Q4AC94 2353 aa9.35□□□□□ -0.91
CACNB3-219ENST00000551544 TEX49A0A1B0GTD5 131 aa9.35□□□□□ -0.91
CACNB3-219ENST00000551544 IFITM1P13164 125 aa9.35□□□□□ -0.91
CACNB3-219ENST00000551544 WFDC11Q8NEX6 87 aa9.35□□□□□ -0.91
CACNB3-219ENST00000551544 UBE2WQ96B02 151 aa9.35□□□□□ -0.91
CACNB3-219ENST00000551544 ZNF625Q96I27 306 aaPredicted RBP9.35□□□□□ -0.91
CACNB3-219ENST00000551544 ICOSQ9Y6W8 199 aa9.35□□□□□ -0.91
CACNB3-219ENST00000551544 TRAV13-1A0A0B4J241 112 aa9.34□□□□□ -0.91
CACNB3-219ENST00000551544 A0A0U1RRA0 63 aa9.34□□□□□ -0.91
CACNB3-219ENST00000551544 TIRAPP58753 221 aa9.34□□□□□ -0.91
CACNB3-219ENST00000551544 MRPL23Q16540 153 aaKnown RBP9.34□□□□□ -0.91
CACNB3-219ENST00000551544 TTC32Q5I0X7 151 aa9.34□□□□□ -0.91
CACNB3-219ENST00000551544 TRAV25A0A0B4J276 109 aa9.34□□□□□ -0.91
CACNB3-219ENST00000551544 H3BT86 120 aa9.34□□□□□ -0.91
CACNB3-219ENST00000551544 RPL36AP83881 106 aaKnown RBP9.34□□□□□ -0.91
CACNB3-219ENST00000551544 TMEM86BQ8N661 226 aa9.34□□□□□ -0.91
CACNB3-219ENST00000551544 RPL36ALQ969Q0 106 aaKnown RBP9.34□□□□□ -0.91
CACNB3-219ENST00000551544 ITPR3Q14573 2671 aa9.34□□□□□ -0.91
CACNB3-219ENST00000551544 NF1P21359 2839 aa9.34□□□□□ -0.91
CACNB3-219ENST00000551544 AKAP9Q99996 3911 aa9.33□□□□□ -0.92
CACNB3-219ENST00000551544 GAGE12JA6NER3 117 aa9.33□□□□□ -0.92
CACNB3-219ENST00000551544 GAGE7O76087 117 aa9.33□□□□□ -0.92
CACNB3-219ENST00000551544 GAGE12FP0CL80 117 aa9.33□□□□□ -0.92
CACNB3-219ENST00000551544 GAGE12GP0CL81 117 aa9.33□□□□□ -0.92
CACNB3-219ENST00000551544 GAGE12IP0CL82 117 aa9.33□□□□□ -0.92
CACNB3-219ENST00000551544 GAGE4Q13068 117 aa9.33□□□□□ -0.92
CACNB3-219ENST00000551544 CITED2Q99967 270 aaPredicted RBP9.33□□□□□ -0.92
CACNB3-219ENST00000551544 ESM1Q9NQ30 184 aa9.33□□□□□ -0.92
CACNB3-219ENST00000551544 APCP25054 2843 aa9.33□□□□□ -0.92
CACNB3-219ENST00000551544 K7EQD1 137 aa9.33□□□□□ -0.92
CACNB3-219ENST00000551544 LINC00242Q5T6M2 205 aa9.33□□□□□ -0.92
CACNB3-219ENST00000551544 Q9H8V8 135 aa9.33□□□□□ -0.92
CACNB3-219ENST00000551544 NOP10Q9NPE3 64 aaKnown RBP9.33□□□□□ -0.92
CACNB3-219ENST00000551544 IGLV5-45A0A087WSX0 123 aa9.32□□□□□ -0.92
CACNB3-219ENST00000551544 NDUFA1O15239 70 aa9.32□□□□□ -0.92
CACNB3-219ENST00000551544 NTM-AS1Q6ZSK4 140 aa9.32□□□□□ -0.92
CACNB3-219ENST00000551544 IL17DQ8TAD2 202 aa9.32□□□□□ -0.92
CACNB3-219ENST00000551544 JMJD1CQ15652 2540 aa9.32□□□□□ -0.92
CACNB3-219ENST00000551544 H7C423 109 aa9.32□□□□□ -0.92
CACNB3-219ENST00000551544 HERVK_113P63121 156 aa9.32□□□□□ -0.92
CACNB3-219ENST00000551544 C2orf82Q6UX34 121 aa9.32□□□□□ -0.92
CACNB3-219ENST00000551544 C15orf53Q8NAA6 179 aa9.32□□□□□ -0.92
CACNB3-219ENST00000551544 FAM240AA0A1B0GVK7 77 aa9.32□□□□□ -0.92
CACNB3-219ENST00000551544 COX6CP09669 75 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms