RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 SIGMAR1Q99720 223 aa9.93□□□□□ -0.82
PRPF40B-209ENST00000548825 ESM1Q9NQ30 184 aa9.93□□□□□ -0.82
PRPF40B-209ENST00000548825 TRBV6-5A0A0K0K1A5 114 aa9.92□□□□□ -0.82
PRPF40B-209ENST00000548825 LOC100131303A0A0U1RQF7 123 aa9.92□□□□□ -0.82
PRPF40B-209ENST00000548825 BRI3O95415 125 aa9.92□□□□□ -0.82
PRPF40B-209ENST00000548825 TMEM89A2RUT3 159 aa9.92□□□□□ -0.82
PRPF40B-209ENST00000548825 LEPROTO15243 131 aa9.92□□□□□ -0.82
PRPF40B-209ENST00000548825 A0A0J9YXY3 114 aa9.91□□□□□ -0.82
PRPF40B-209ENST00000548825 LINC00694P0DN24 101 aa9.91□□□□□ -0.82
PRPF40B-209ENST00000548825 ADAMTSL4-AS1Q5T5F5 129 aa9.91□□□□□ -0.82
PRPF40B-209ENST00000548825 TMEM238C9JI98 176 aa9.91□□□□□ -0.82
PRPF40B-209ENST00000548825 C4orf3Q8WVX3 66 aa9.91□□□□□ -0.82
PRPF40B-209ENST00000548825 NFE4Q86UQ8 179 aa9.9□□□□□ -0.82
PRPF40B-209ENST00000548825 UBE2L6O14933 153 aa9.9□□□□□ -0.83
PRPF40B-209ENST00000548825 UBE2D1P51668 147 aa9.9□□□□□ -0.83
PRPF40B-209ENST00000548825 ODF3Q96PU9 254 aa9.9□□□□□ -0.83
PRPF40B-209ENST00000548825 DEFB4AO15263 64 aa9.89□□□□□ -0.83
PRPF40B-209ENST00000548825 SMCPP49901 116 aaPredicted RBP9.89□□□□□ -0.83
PRPF40B-209ENST00000548825 CLPSL2Q6UWE3 100 aa9.89□□□□□ -0.83
PRPF40B-209ENST00000548825 POM121L12Q8N7R1 296 aa9.89□□□□□ -0.83
PRPF40B-209ENST00000548825 A0A1B0GV72 72 aa9.89□□□□□ -0.83
PRPF40B-209ENST00000548825 TRGV4A0A0C4DH28 118 aa9.89□□□□□ -0.83
PRPF40B-209ENST00000548825 EIF4EBP3O60516 100 aaPredicted RBP9.89□□□□□ -0.83
PRPF40B-209ENST00000548825 CLEC2BQ92478 149 aa9.89□□□□□ -0.83
PRPF40B-209ENST00000548825 COX6A2Q02221 97 aa9.88□□□□□ -0.83
PRPF40B-209ENST00000548825 GAGE6Q13070 117 aa9.88□□□□□ -0.83
PRPF40B-209ENST00000548825 LYRM7Q5U5X0 104 aa9.88□□□□□ -0.83
PRPF40B-209ENST00000548825 Q9H8V8 135 aa9.88□□□□□ -0.83
PRPF40B-209ENST00000548825 RPL36AP83881 106 aaKnown RBP9.88□□□□□ -0.83
PRPF40B-209ENST00000548825 RPL36ALQ969Q0 106 aaKnown RBP9.88□□□□□ -0.83
PRPF40B-209ENST00000548825 C1orf158Q8N1D5 194 aa9.87□□□□□ -0.83
PRPF40B-209ENST00000548825 ANKRD29Q8N6D5 301 aa9.87□□□□□ -0.83
PRPF40B-209ENST00000548825 CHCHD7Q9BUK0 85 aa9.87□□□□□ -0.83
PRPF40B-209ENST00000548825 FOXI1Q12951 378 aa9.87□□□□□ -0.83
PRPF40B-209ENST00000548825 UBE2D4Q9Y2X8 147 aa9.87□□□□□ -0.83
PRPF40B-209ENST00000548825 SLC25A20O43772 301 aa9.87□□□□□ -0.83
PRPF40B-209ENST00000548825 TENM1Q9UKZ4 2725 aa9.86□□□□□ -0.83
PRPF40B-209ENST00000548825 TMEM262E9PQX1 116 aa9.86□□□□□ -0.83
PRPF40B-209ENST00000548825 PRIMA1Q86XR5 153 aa9.86□□□□□ -0.83
PRPF40B-209ENST00000548825 NTN5Q8WTR8 489 aaPredicted RBP9.86□□□□□ -0.83
PRPF40B-209ENST00000548825 AMELXQ99217 191 aa9.86□□□□□ -0.83
PRPF40B-209ENST00000548825 CHCHD5Q9BSY4 110 aa9.86□□□□□ -0.83
PRPF40B-209ENST00000548825 OTOGQ6ZRI0 2925 aa9.86□□□□□ -0.83
PRPF40B-209ENST00000548825 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.85□□□□□ -0.83
PRPF40B-209ENST00000548825 RPL32P62910 135 aaKnown RBP9.85□□□□□ -0.83
PRPF40B-209ENST00000548825 PRO0461Q9UI25 63 aa9.85□□□□□ -0.83
PRPF40B-209ENST00000548825 IGHV1-58A0A0C4DH39 117 aa9.85□□□□□ -0.83
PRPF40B-209ENST00000548825 C11orf72Q8NBR9 251 aa9.85□□□□□ -0.83
PRPF40B-209ENST00000548825 C1QTNF4Q9BXJ3 329 aa9.85□□□□□ -0.83
PRPF40B-209ENST00000548825 IGHV3-33P01772 117 aa9.84□□□□□ -0.83
PRPF40B-209ENST00000548825 PF4P02776 101 aa9.84□□□□□ -0.83
PRPF40B-209ENST00000548825 LINC01006Q8NI28 216 aa9.84□□□□□ -0.83
PRPF40B-209ENST00000548825 RPL13AP40429 203 aaKnown RBP9.84□□□□□ -0.83
PRPF40B-209ENST00000548825 TRIAP1O43715 76 aa9.83□□□□□ -0.84
PRPF40B-209ENST00000548825 MT-ATP8P03928 68 aa9.83□□□□□ -0.84
PRPF40B-209ENST00000548825 VSIG2Q96IQ7 327 aa9.83□□□□□ -0.84
PRPF40B-209ENST00000548825 HIVEP1P15822 2718 aa9.83□□□□□ -0.84
PRPF40B-209ENST00000548825 FSHBP01225 129 aa9.82□□□□□ -0.84
PRPF40B-209ENST00000548825 NOTCH1P46531 2555 aa9.82□□□□□ -0.84
PRPF40B-209ENST00000548825 TEX49A0A1B0GTD5 131 aa9.82□□□□□ -0.84
PRPF40B-209ENST00000548825 CRLF1O75462 422 aa9.82□□□□□ -0.84
PRPF40B-209ENST00000548825 HTN3P15516 51 aa9.82□□□□□ -0.84
PRPF40B-209ENST00000548825 TMEM101Q96IK0 257 aa9.82□□□□□ -0.84
PRPF40B-209ENST00000548825 MAST4O15021 2626 aa9.82□□□□□ -0.84
PRPF40B-209ENST00000548825 PFN2P35080 140 aa9.81□□□□□ -0.84
PRPF40B-209ENST00000548825 PIK3CD-AS1Q5SR53 167 aa9.81□□□□□ -0.84
PRPF40B-209ENST00000548825 C5orf38Q86SI9 138 aa9.81□□□□□ -0.84
PRPF40B-209ENST00000548825 MRPS36P82909 103 aaKnown RBP9.81□□□□□ -0.84
PRPF40B-209ENST00000548825 CIRBPQ14011 172 aaKnown RBP9.81□□□□□ -0.84
PRPF40B-209ENST00000548825 TMEM263Q8WUH6 116 aaKnown RBP9.81□□□□□ -0.84
PRPF40B-209ENST00000548825 FAM104AQ969W3 186 aa9.81□□□□□ -0.84
PRPF40B-209ENST00000548825 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.81□□□□□ -0.84
PRPF40B-209ENST00000548825 K7EQD1 137 aa9.81□□□□□ -0.84
PRPF40B-209ENST00000548825 UBE2D3P61077 147 aa9.81□□□□□ -0.84
PRPF40B-209ENST00000548825 UBE2D2P62837 147 aa9.81□□□□□ -0.84
PRPF40B-209ENST00000548825 SPANXA1Q9NS26 97 aa9.81□□□□□ -0.84
PRPF40B-209ENST00000548825 F8P00451 2351 aa9.8□□□□□ -0.84
PRPF40B-209ENST00000548825 COX6CP09669 75 aa9.8□□□□□ -0.84
PRPF40B-209ENST00000548825 C2orf82Q6UX34 121 aa9.8□□□□□ -0.84
PRPF40B-209ENST00000548825 CARD19Q96LW7 228 aa9.8□□□□□ -0.84
PRPF40B-209ENST00000548825 TEN1Q86WV5 123 aa9.8□□□□□ -0.84
PRPF40B-209ENST00000548825 LINC00482Q8N8I6 264 aa9.8□□□□□ -0.84
PRPF40B-209ENST00000548825 NTM-AS1Q6ZSK4 140 aa9.79□□□□□ -0.84
PRPF40B-209ENST00000548825 KRTAP1-3Q8IUG1 177 aa9.79□□□□□ -0.84
PRPF40B-209ENST00000548825 PPDPFLQ8WWR9 84 aa9.79□□□□□ -0.84
PRPF40B-209ENST00000548825 TRBV20-1A0A075B6N2 111 aa9.79□□□□□ -0.84
PRPF40B-209ENST00000548825 FHL3Q13643 280 aa9.79□□□□□ -0.84
PRPF40B-209ENST00000548825 LINC00242Q5T6M2 205 aa9.78□□□□□ -0.84
PRPF40B-209ENST00000548825 ICOSQ9Y6W8 199 aa9.78□□□□□ -0.84
PRPF40B-209ENST00000548825 NBEAL1Q6ZS30 2694 aa9.78□□□□□ -0.84
PRPF40B-209ENST00000548825 ATXN8Q156A1 80 aa9.78□□□□□ -0.84
PRPF40B-209ENST00000548825 STAB1Q9NY15 2570 aa9.78□□□□□ -0.84
PRPF40B-209ENST00000548825 TINCRA0A1B0GVN0 87 aa9.77□□□□□ -0.84
PRPF40B-209ENST00000548825 RS1O15537 224 aa9.77□□□□□ -0.84
PRPF40B-209ENST00000548825 XGP55808 180 aa9.77□□□□□ -0.84
PRPF40B-209ENST00000548825 LINC00158P58513 81 aa9.77□□□□□ -0.84
PRPF40B-209ENST00000548825 LINC01620Q4KN68 170 aa9.77□□□□□ -0.84
PRPF40B-209ENST00000548825 RNF152Q8N8N0 203 aa9.77□□□□□ -0.84
PRPF40B-209ENST00000548825 PDZD2O15018 2839 aa9.77□□□□□ -0.85
PRPF40B-209ENST00000548825 TMEM243Q9BU79 118 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms