RNA–Protein interactions for RNA: ENST00000545046.5

CHFR-224, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,186 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-224ENST00000545046 FXYD2P54710 66 aa11.78□□□□□ -0.52
CHFR-224ENST00000545046 LINC00612Q8N6U2 182 aa11.78□□□□□ -0.52
CHFR-224ENST00000545046 LOC100131303A0A0U1RQF7 123 aa11.78□□□□□ -0.52
CHFR-224ENST00000545046 TINCRA0A1B0GVN0 87 aa11.78□□□□□ -0.52
CHFR-224ENST00000545046 VAMP3Q15836 100 aa11.78□□□□□ -0.52
CHFR-224ENST00000545046 DEFB135Q30KP9 77 aa11.78□□□□□ -0.52
CHFR-224ENST00000545046 SMIM13P0DJ93 91 aa11.77□□□□□ -0.53
CHFR-224ENST00000545046 KRTAP24-1Q3LI83 254 aa11.77□□□□□ -0.53
CHFR-224ENST00000545046 CYSRT1A8MQ03 144 aa11.77□□□□□ -0.53
CHFR-224ENST00000545046 TSPEAR-AS2P59090 65 aa11.77□□□□□ -0.53
CHFR-224ENST00000545046 PLEKHB2Q96CS7 222 aa11.77□□□□□ -0.53
CHFR-224ENST00000545046 UBE2L6O14933 153 aa11.76□□□□□ -0.53
CHFR-224ENST00000545046 SBSPONQ8IVN8 264 aa11.76□□□□□ -0.53
CHFR-224ENST00000545046 TMEM243Q9BU79 118 aa11.76□□□□□ -0.53
CHFR-224ENST00000545046 CSDC2Q9Y534 153 aaKnown RBP11.76□□□□□ -0.53
CHFR-224ENST00000545046 LYRM9A8MSI8 78 aa11.75□□□□□ -0.53
CHFR-224ENST00000545046 LINC00694P0DN24 101 aa11.75□□□□□ -0.53
CHFR-224ENST00000545046 IGHV3-64A0A075B6Q5 118 aa11.75□□□□□ -0.53
CHFR-224ENST00000545046 K7EP13 123 aa11.75□□□□□ -0.53
CHFR-224ENST00000545046 RAB37Q96AX2 223 aa11.75□□□□□ -0.53
CHFR-224ENST00000545046 GEMIN7Q9H840 131 aaKnown RBP11.75□□□□□ -0.53
CHFR-224ENST00000545046 C9orf118A6NHY6 69 aa11.74□□□□□ -0.53
CHFR-224ENST00000545046 UBE2D1P51668 147 aa11.74□□□□□ -0.53
CHFR-224ENST00000545046 SRSF9Q13242 221 aaKnown RBP eCLIP11.74□□□□□ -0.53
CHFR-224ENST00000545046 UBE2V1Q13404 147 aa11.74□□□□□ -0.53
CHFR-224ENST00000545046 AMMECR1LQ6DCA0 310 aa11.74□□□□□ -0.53
CHFR-224ENST00000545046 FAM222AQ5U5X8 452 aa11.74□□□□□ -0.53
CHFR-224ENST00000545046 C3orf56Q8N813 242 aa11.74□□□□□ -0.53
CHFR-224ENST00000545046 NHP2Q9NX24 153 aaKnown RBP11.74□□□□□ -0.53
CHFR-224ENST00000545046 H7C423 109 aa11.73□□□□□ -0.53
CHFR-224ENST00000545046 OR5A1Q8NGJ0 315 aa11.73□□□□□ -0.53
CHFR-224ENST00000545046 TMEM101Q96IK0 257 aa11.73□□□□□ -0.53
CHFR-224ENST00000545046 A0A0J9YY99 117 aa11.72□□□□□ -0.53
CHFR-224ENST00000545046 IGHV4-30-4P0DP06 118 aa11.72□□□□□ -0.53
CHFR-224ENST00000545046 TIRAPP58753 221 aa11.72□□□□□ -0.53
CHFR-224ENST00000545046 IGHV3-30-3P0DP02 117 aa11.71□□□□□ -0.53
CHFR-224ENST00000545046 IGHV4-28A0A0C4DH34 117 aa11.71□□□□□ -0.54
CHFR-224ENST00000545046 IGHV1-58A0A0C4DH39 117 aa11.71□□□□□ -0.54
CHFR-224ENST00000545046 H3BUT2 72 aa11.71□□□□□ -0.54
CHFR-224ENST00000545046 MIFP14174 115 aa11.71□□□□□ -0.54
CHFR-224ENST00000545046 CDC42SE2Q9NRR3 84 aa11.71□□□□□ -0.54
CHFR-224ENST00000545046 SHISA2Q6UWI4 295 aa11.7□□□□□ -0.54
CHFR-224ENST00000545046 SPANXB1Q9NS25 103 aaPredicted RBP11.7□□□□□ -0.54
CHFR-224ENST00000545046 PRO0255Q9UI72 69 aa11.7□□□□□ -0.54
CHFR-224ENST00000545046 TRBV6-8A0A0A6YYG3 113 aa11.69□□□□□ -0.54
CHFR-224ENST00000545046 TRAV8-3A0A0A6YYJ7 113 aa11.69□□□□□ -0.54
CHFR-224ENST00000545046 DEFB4AO15263 64 aa11.69□□□□□ -0.54
CHFR-224ENST00000545046 CCL25O15444 150 aa11.69□□□□□ -0.54
CHFR-224ENST00000545046 GYPEP15421 78 aa11.69□□□□□ -0.54
CHFR-224ENST00000545046 HERVK_113P63121 156 aa11.69□□□□□ -0.54
CHFR-224ENST00000545046 RNF183Q96D59 192 aa11.69□□□□□ -0.54
CHFR-224ENST00000545046 TMEM238LA0A1B0GVL6 79 aa11.69□□□□□ -0.54
CHFR-224ENST00000545046 A6NJY4 79 aa11.69□□□□□ -0.54
CHFR-224ENST00000545046 C12orf74Q32Q52 190 aa11.69□□□□□ -0.54
CHFR-224ENST00000545046 OXLD1Q5BKU9 147 aa11.69□□□□□ -0.54
CHFR-224ENST00000545046 FAM19A3Q7Z5A8 133 aa11.69□□□□□ -0.54
CHFR-224ENST00000545046 K7ERJ3 54 aa11.68□□□□□ -0.54
CHFR-224ENST00000545046 SPINK8P0C7L1 97 aa11.68□□□□□ -0.54
CHFR-224ENST00000545046 ATP6V0E2Q8NHE4 81 aa11.68□□□□□ -0.54
CHFR-224ENST00000545046 VSIG2Q96IQ7 327 aa11.68□□□□□ -0.54
CHFR-224ENST00000545046 IGLV5-45A0A087WSX0 123 aa11.68□□□□□ -0.54
CHFR-224ENST00000545046 DAD1P61803 113 aa11.68□□□□□ -0.54
CHFR-224ENST00000545046 CDKN2A-AS1Q9UH64 79 aa11.68□□□□□ -0.54
CHFR-224ENST00000545046 GAGE6Q13070 117 aa11.67□□□□□ -0.54
CHFR-224ENST00000545046 LINC00242Q5T6M2 205 aa11.67□□□□□ -0.54
CHFR-224ENST00000545046 Q8NAQ8 132 aa11.67□□□□□ -0.54
CHFR-224ENST00000545046 NAA38Q9BRA0 125 aaKnown RBP11.67□□□□□ -0.54
CHFR-224ENST00000545046 CHCHD5Q9BSY4 110 aa11.67□□□□□ -0.54
CHFR-224ENST00000545046 TRAV13-1A0A0B4J241 112 aa11.67□□□□□ -0.54
CHFR-224ENST00000545046 COX6A2Q02221 97 aa11.67□□□□□ -0.54
CHFR-224ENST00000545046 NBEAL2Q6ZNJ1 2754 aa11.67□□□□□ -0.54
CHFR-224ENST00000545046 PAX4O43316 350 aa11.66□□□□□ -0.54
CHFR-224ENST00000545046 SAMD5Q5TGI4 173 aa11.66□□□□□ -0.54
CHFR-224ENST00000545046 GAGE10A6NGK3 116 aa11.65□□□□□ -0.54
CHFR-224ENST00000545046 A0A1W2PPM0 123 aa11.65□□□□□ -0.54
CHFR-224ENST00000545046 A0A1B0GWB2 263 aa11.64□□□□□ -0.55
CHFR-224ENST00000545046 SPART-AS1P0CW21 52 aa11.64□□□□□ -0.55
CHFR-224ENST00000545046 KRTAP10-11P60412 298 aa11.64□□□□□ -0.55
CHFR-224ENST00000545046 GTF2H5Q6ZYL4 71 aa11.64□□□□□ -0.55
CHFR-224ENST00000545046 NDUFA12Q9UI09 145 aa11.64□□□□□ -0.55
CHFR-224ENST00000545046 TRRAPQ9Y4A5 3859 aa11.64□□□□□ -0.55
CHFR-224ENST00000545046 A0A0J9YXY3 114 aa11.64□□□□□ -0.55
CHFR-224ENST00000545046 TMEM238C9JI98 176 aa11.64□□□□□ -0.55
CHFR-224ENST00000545046 IGHV3-30P01768 117 aa11.64□□□□□ -0.55
CHFR-224ENST00000545046 IGHV3-30-5P0DP03 117 aa11.64□□□□□ -0.55
CHFR-224ENST00000545046 C10orf126Q8N4M7 172 aa11.64□□□□□ -0.55
CHFR-224ENST00000545046 ATP5G1P05496 136 aa11.63□□□□□ -0.55
CHFR-224ENST00000545046 FABP2P12104 132 aa11.63□□□□□ -0.55
CHFR-224ENST00000545046 EGFEM1PQ0D2K5 195 aa11.62□□□□□ -0.55
CHFR-224ENST00000545046 PRIMA1Q86XR5 153 aa11.62□□□□□ -0.55
CHFR-224ENST00000545046 CELA1Q9UNI1 258 aa11.62□□□□□ -0.55
CHFR-224ENST00000545046 A8MZ25 164 aa11.62□□□□□ -0.55
CHFR-224ENST00000545046 IGLL5B9A064 214 aa11.62□□□□□ -0.55
CHFR-224ENST00000545046 ZFAND6Q6FIF0 208 aa11.62□□□□□ -0.55
CHFR-224ENST00000545046 IGLV4-60A0A075B6I1 120 aa11.6□□□□□ -0.55
CHFR-224ENST00000545046 K7EP34 96 aa11.6□□□□□ -0.55
CHFR-224ENST00000545046 A0A096LPF7 62 aa11.6□□□□□ -0.55
CHFR-224ENST00000545046 IGLV5-39A0A0G2JS06 123 aa11.6□□□□□ -0.55
CHFR-224ENST00000545046 SPCS1Q9Y6A9 102 aa11.6□□□□□ -0.55
CHFR-224ENST00000545046 FBN1P35555 2871 aaKnown RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms