RNA–Protein interactions for RNA: ENST00000544246.5

PCDH9-204, Transcript of protocadherin 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH9, Length 6,234 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-204ENST00000544246 FER1L5A0AVI2 2057 aa7.74□□□□□ -1.17
PCDH9-204ENST00000544246 MAPKAPK5-AS1Q8N8E1 139 aa7.74□□□□□ -1.17
PCDH9-204ENST00000544246 IGLV2-18A0A075B6J9 118 aa7.74□□□□□ -1.17
PCDH9-204ENST00000544246 M0R2N4 97 aa7.74□□□□□ -1.17
PCDH9-204ENST00000544246 TNFRSF13BO14836 293 aaPredicted RBP7.74□□□□□ -1.17
PCDH9-204ENST00000544246 SMIM11BQ8TCY0 68 aa7.74□□□□□ -1.17
PCDH9-204ENST00000544246 ZNF73O43830 326 aaPredicted RBP7.73□□□□□ -1.17
PCDH9-204ENST00000544246 Q6Q795 121 aa7.73□□□□□ -1.17
PCDH9-204ENST00000544246 K7EQG2 157 aa7.73□□□□□ -1.17
PCDH9-204ENST00000544246 M0QY20 66 aa7.73□□□□□ -1.17
PCDH9-204ENST00000544246 IGLV2-14P01704 120 aa7.73□□□□□ -1.17
PCDH9-204ENST00000544246 COX17Q14061 63 aa7.73□□□□□ -1.17
PCDH9-204ENST00000544246 LST1O00453 97 aa7.73□□□□□ -1.17
PCDH9-204ENST00000544246 Q6ZSR3 168 aa7.73□□□□□ -1.17
PCDH9-204ENST00000544246 CELA1Q9UNI1 258 aa7.73□□□□□ -1.17
PCDH9-204ENST00000544246 KIAA2026Q5HYC2 2103 aa7.73□□□□□ -1.17
PCDH9-204ENST00000544246 NCKAP5O14513 1909 aa7.73□□□□□ -1.17
PCDH9-204ENST00000544246 GDF5OSQ5U4N7 250 aa7.72□□□□□ -1.17
PCDH9-204ENST00000544246 EML6Q6ZMW3 1958 aa7.72□□□□□ -1.17
PCDH9-204ENST00000544246 TRAV7A0A075B6U4 112 aa7.72□□□□□ -1.17
PCDH9-204ENST00000544246 Q6YL49 198 aa7.72□□□□□ -1.17
PCDH9-204ENST00000544246 SOSTDC1Q6X4U4 206 aa7.72□□□□□ -1.17
PCDH9-204ENST00000544246 PYGO1Q9Y3Y4 419 aa7.72□□□□□ -1.17
PCDH9-204ENST00000544246 NCOR2Q9Y618 2525 aa7.72□□□□□ -1.17
PCDH9-204ENST00000544246 HEATR1Q9H583 2144 aaKnown RBP7.72□□□□□ -1.17
PCDH9-204ENST00000544246 MYLKQ15746 1914 aa7.72□□□□□ -1.17
PCDH9-204ENST00000544246 LINC00208Q96KT6 92 aa7.72□□□□□ -1.17
PCDH9-204ENST00000544246 BBC3Q96PG8 261 aaPredicted RBP7.72□□□□□ -1.17
PCDH9-204ENST00000544246 IGLV2-8P01709 118 aa7.72□□□□□ -1.17
PCDH9-204ENST00000544246 NACAE9PAV3 2078 aa7.71□□□□□ -1.17
PCDH9-204ENST00000544246 PCNX1Q96RV3 2341 aa7.71□□□□□ -1.18
PCDH9-204ENST00000544246 SHISA2Q6UWI4 295 aa7.71□□□□□ -1.18
PCDH9-204ENST00000544246 POM121L12Q8N7R1 296 aa7.71□□□□□ -1.18
PCDH9-204ENST00000544246 LINC00482Q8N8I6 264 aa7.71□□□□□ -1.18
PCDH9-204ENST00000544246 Q8N976 141 aa7.71□□□□□ -1.18
PCDH9-204ENST00000544246 ODF3BA8MYP8 253 aa7.71□□□□□ -1.18
PCDH9-204ENST00000544246 RETNLBQ9BQ08 111 aa7.71□□□□□ -1.18
PCDH9-204ENST00000544246 U3KQK5 164 aa7.71□□□□□ -1.18
PCDH9-204ENST00000544246 ALPK2Q86TB3 2170 aa7.7□□□□□ -1.18
PCDH9-204ENST00000544246 RBX1P62877 108 aa7.7□□□□□ -1.18
PCDH9-204ENST00000544246 PHF3Q92576 2039 aaKnown RBP7.7□□□□□ -1.18
PCDH9-204ENST00000544246 M0QXV9 152 aa7.7□□□□□ -1.18
PCDH9-204ENST00000544246 LY6G6CO95867 125 aa7.7□□□□□ -1.18
PCDH9-204ENST00000544246 LELP1Q5T871 98 aa7.7□□□□□ -1.18
PCDH9-204ENST00000544246 COL4A3Q01955 1670 aa7.7□□□□□ -1.18
PCDH9-204ENST00000544246 LINC00526Q96FQ7 95 aa7.7□□□□□ -1.18
PCDH9-204ENST00000544246 IGHV6-1A0A0B4J1U7 121 aa7.7□□□□□ -1.18
PCDH9-204ENST00000544246 LINC00959A0A1B0GUT2 108 aa7.7□□□□□ -1.18
PCDH9-204ENST00000544246 A0A1W2PNU3 283 aaPredicted RBP7.7□□□□□ -1.18
PCDH9-204ENST00000544246 A8MZ25 164 aa7.7□□□□□ -1.18
PCDH9-204ENST00000544246 RPL28P46779 137 aaKnown RBP7.7□□□□□ -1.18
PCDH9-204ENST00000544246 PROK1P58294 105 aa7.7□□□□□ -1.18
PCDH9-204ENST00000544246 NANOS2P60321 138 aaKnown RBP7.7□□□□□ -1.18
PCDH9-204ENST00000544246 CIRBP-AS1Q8TBR5 109 aa7.69□□□□□ -1.18
PCDH9-204ENST00000544246 TP73-AS1Q9UF72 201 aa7.69□□□□□ -1.18
PCDH9-204ENST00000544246 LOC100131303A0A0U1RQF7 123 aa7.69□□□□□ -1.18
PCDH9-204ENST00000544246 SPINK1P00995 79 aa7.69□□□□□ -1.18
PCDH9-204ENST00000544246 IGF1P05019 195 aa7.69□□□□□ -1.18
PCDH9-204ENST00000544246 NOTCH2Q04721 2471 aa7.69□□□□□ -1.18
PCDH9-204ENST00000544246 KPRPQ5T749 579 aaPredicted RBP7.68□□□□□ -1.18
PCDH9-204ENST00000544246 MUC7Q8TAX7 377 aa7.68□□□□□ -1.18
PCDH9-204ENST00000544246 AKAP6Q13023 2319 aa7.68□□□□□ -1.18
PCDH9-204ENST00000544246 TSHBP01222 138 aa7.68□□□□□ -1.18
PCDH9-204ENST00000544246 RNF185Q96GF1 192 aa7.68□□□□□ -1.18
PCDH9-204ENST00000544246 MBD6Q96DN6 1003 aa7.67□□□□□ -1.18
PCDH9-204ENST00000544246 CLUHP3Q96NS8 147 aa7.67□□□□□ -1.18
PCDH9-204ENST00000544246 GOLGB1Q14789 3259 aaKnown RBP7.67□□□□□ -1.18
PCDH9-204ENST00000544246 BEAN1Q3B7T3 259 aa7.67□□□□□ -1.18
PCDH9-204ENST00000544246 CSDC2Q9Y534 153 aaKnown RBP7.67□□□□□ -1.18
PCDH9-204ENST00000544246 PCOTHQ58A44 107 aa7.66□□□□□ -1.18
PCDH9-204ENST00000544246 TRBV7-7A0A0K0K1E9 115 aa7.66□□□□□ -1.18
PCDH9-204ENST00000544246 PSPHP1O15172 72 aa7.66□□□□□ -1.18
PCDH9-204ENST00000544246 NTM-AS1Q6ZSK4 140 aa7.66□□□□□ -1.18
PCDH9-204ENST00000544246 C11orf1Q9H5F2 150 aa7.66□□□□□ -1.18
PCDH9-204ENST00000544246 REG3GQ6UW15 175 aa7.66□□□□□ -1.18
PCDH9-204ENST00000544246 NRACQ8N912 160 aa7.66□□□□□ -1.18
PCDH9-204ENST00000544246 PTPRSQ13332 1948 aa7.66□□□□□ -1.18
PCDH9-204ENST00000544246 XGP55808 180 aa7.65□□□□□ -1.18
PCDH9-204ENST00000544246 C1orf137Q5JT78 98 aa7.65□□□□□ -1.18
PCDH9-204ENST00000544246 Q8IZM0 81 aa7.65□□□□□ -1.18
PCDH9-204ENST00000544246 NUPR2A6NF83 97 aa7.65□□□□□ -1.18
PCDH9-204ENST00000544246 USF3Q68DE3 2245 aa7.65□□□□□ -1.18
PCDH9-204ENST00000544246 INAFM1C9JVW0 142 aa7.65□□□□□ -1.18
PCDH9-204ENST00000544246 PLXND1Q9Y4D7 1925 aa7.65□□□□□ -1.18
PCDH9-204ENST00000544246 CEP192Q8TEP8 1941 aa7.64□□□□□ -1.19
PCDH9-204ENST00000544246 ZNF407Q9C0G0 2248 aa7.64□□□□□ -1.19
PCDH9-204ENST00000544246 PLXNA2O75051 1894 aa7.64□□□□□ -1.19
PCDH9-204ENST00000544246 H0Y9P7 68 aa7.64□□□□□ -1.19
PCDH9-204ENST00000544246 LINC01547P58512 204 aaPredicted RBP7.64□□□□□ -1.19
PCDH9-204ENST00000544246 DOCK7Q96N67 2140 aa7.63□□□□□ -1.19
PCDH9-204ENST00000544246 CACNA1AO00555 2505 aa7.63□□□□□ -1.19
PCDH9-204ENST00000544246 PKDREJQ9NTG1 2253 aa7.63□□□□□ -1.19
PCDH9-204ENST00000544246 CHD3Q12873 2000 aaKnown RBP7.63□□□□□ -1.19
PCDH9-204ENST00000544246 CRYGAP11844 174 aa7.63□□□□□ -1.19
PCDH9-204ENST00000544246 LMO4P61968 165 aa7.62□□□□□ -1.19
PCDH9-204ENST00000544246 FBXL19-AS1Q494R0 122 aa7.62□□□□□ -1.19
PCDH9-204ENST00000544246 P0C879 139 aa7.62□□□□□ -1.19
PCDH9-204ENST00000544246 CRIP1P50238 77 aa7.62□□□□□ -1.19
PCDH9-204ENST00000544246 Q8N814 137 aa7.62□□□□□ -1.19
PCDH9-204ENST00000544246 ROS1P08922 2347 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms