RNA–Protein interactions for RNA: ENST00000543721.1

LMO3-229, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 3,626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-229ENST00000543721 Q9HAA7 133 aa3.6□□□□□ -1.83
LMO3-229ENST00000543721 CHD8Q9HCK8 2581 aa3.6□□□□□ -1.83
LMO3-229ENST00000543721 A0A0U1RRA0 63 aa3.59□□□□□ -1.83
LMO3-229ENST00000543721 FAM236DA0A1B0GTK5 79 aa3.59□□□□□ -1.83
LMO3-229ENST00000543721 CCL21O00585 134 aa3.59□□□□□ -1.83
LMO3-229ENST00000543721 FAM236CP0DP71 79 aa3.59□□□□□ -1.83
LMO3-229ENST00000543721 RPL36AP83881 106 aaKnown RBP3.59□□□□□ -1.83
LMO3-229ENST00000543721 LINC01561Q8N1V8 128 aa3.59□□□□□ -1.83
LMO3-229ENST00000543721 KIR2DL5BQ8NHK3 375 aa3.59□□□□□ -1.83
LMO3-229ENST00000543721 RPL36ALQ969Q0 106 aaKnown RBP3.59□□□□□ -1.83
LMO3-229ENST00000543721 DSCR8Q96T75 97 aa3.59□□□□□ -1.83
LMO3-229ENST00000543721 USP34Q70CQ2 3546 aa3.59□□□□□ -1.83
LMO3-229ENST00000543721 ZNF561-AS1K7EIQ3 104 aa3.59□□□□□ -1.83
LMO3-229ENST00000543721 COX6A2Q02221 97 aa3.59□□□□□ -1.83
LMO3-229ENST00000543721 TMEM243Q9BU79 118 aa3.59□□□□□ -1.83
LMO3-229ENST00000543721 UBL5Q9BZL1 73 aa3.59□□□□□ -1.83
LMO3-229ENST00000543721 IBA57-AS1B1ANH7 110 aa3.59□□□□□ -1.84
LMO3-229ENST00000543721 CFHR3Q02985 330 aa3.59□□□□□ -1.84
LMO3-229ENST00000543721 SMIM11BQ8TCY0 68 aa3.59□□□□□ -1.84
LMO3-229ENST00000543721 COX7B2Q8TF08 81 aa3.59□□□□□ -1.84
LMO3-229ENST00000543721 PRO0628Q9UI54 55 aa3.59□□□□□ -1.84
LMO3-229ENST00000543721 GPR179Q6PRD1 2367 aa3.59□□□□□ -1.84
LMO3-229ENST00000543721 Q5XG85 94 aa3.58□□□□□ -1.84
LMO3-229ENST00000543721 TRAV7A0A075B6U4 112 aa3.58□□□□□ -1.84
LMO3-229ENST00000543721 H3BUX3 64 aa3.58□□□□□ -1.84
LMO3-229ENST00000543721 TMEM256-PLSCR3K7ERE1 68 aa3.58□□□□□ -1.84
LMO3-229ENST00000543721 LECT2O14960 151 aa3.58□□□□□ -1.84
LMO3-229ENST00000543721 ATP5EP56381 51 aaPredicted RBP3.58□□□□□ -1.84
LMO3-229ENST00000543721 PROK1P58294 105 aa3.58□□□□□ -1.84
LMO3-229ENST00000543721 LYPD5Q6UWN5 251 aa3.58□□□□□ -1.84
LMO3-229ENST00000543721 HRCT1Q6UXD1 115 aa3.58□□□□□ -1.84
LMO3-229ENST00000543721 MIR7-3HGQ8N6C7 128 aa3.58□□□□□ -1.84
LMO3-229ENST00000543721 KNCNA6PVL3 124 aa3.58□□□□□ -1.84
LMO3-229ENST00000543721 H3BQ85 93 aa3.58□□□□□ -1.84
LMO3-229ENST00000543721 NDUFC1O43677 76 aa3.58□□□□□ -1.84
LMO3-229ENST00000543721 HOXD3P31249 432 aaPredicted RBP3.58□□□□□ -1.84
LMO3-229ENST00000543721 LINC00158P58513 81 aa3.58□□□□□ -1.84
LMO3-229ENST00000543721 LY6EQ16553 131 aa3.58□□□□□ -1.84
LMO3-229ENST00000543721 LINC00337Q8N6G1 96 aa3.58□□□□□ -1.84
LMO3-229ENST00000543721 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.58□□□□□ -1.84
LMO3-229ENST00000543721 CDC42SE2Q9NRR3 84 aa3.58□□□□□ -1.84
LMO3-229ENST00000543721 NCOR2Q9Y618 2525 aa3.58□□□□□ -1.84
LMO3-229ENST00000543721 IGHV3-38A0A0C4DH36 116 aa3.57□□□□□ -1.84
LMO3-229ENST00000543721 UBE2L6O14933 153 aa3.57□□□□□ -1.84
LMO3-229ENST00000543721 INSP01308 110 aa3.57□□□□□ -1.84
LMO3-229ENST00000543721 C4orf26Q17RF5 130 aa3.57□□□□□ -1.84
LMO3-229ENST00000543721 LINC00167Q96N53 147 aa3.57□□□□□ -1.84
LMO3-229ENST00000543721 BPESC1Q9GZL8 116 aa3.57□□□□□ -1.84
LMO3-229ENST00000543721 PCNX1Q96RV3 2341 aa3.57□□□□□ -1.84
LMO3-229ENST00000543721 MYO9AB2RTY4 2548 aa3.57□□□□□ -1.84
LMO3-229ENST00000543721 A0A087WYN8 130 aa3.57□□□□□ -1.84
LMO3-229ENST00000543721 SMIM26A0A096LP01 95 aa3.57□□□□□ -1.84
LMO3-229ENST00000543721 EPM2AB3EWF7 344 aa3.57□□□□□ -1.84
LMO3-229ENST00000543721 HTN1P15515 57 aa3.57□□□□□ -1.84
LMO3-229ENST00000543721 PFN2P35080 140 aa3.57□□□□□ -1.84
LMO3-229ENST00000543721 TMEM86BQ8N661 226 aa3.57□□□□□ -1.84
LMO3-229ENST00000543721 C11orf44Q8N8P7 122 aa3.57□□□□□ -1.84
LMO3-229ENST00000543721 AKAP6Q13023 2319 aa3.57□□□□□ -1.84
LMO3-229ENST00000543721 CACNA1HO95180 2353 aa3.57□□□□□ -1.84
LMO3-229ENST00000543721 A0A087WVE0 104 aa3.57□□□□□ -1.84
LMO3-229ENST00000543721 XCL1P47992 114 aa3.57□□□□□ -1.84
LMO3-229ENST00000543721 Q6ZSN1 163 aa3.57□□□□□ -1.84
LMO3-229ENST00000543721 XCL2Q9UBD3 114 aa3.57□□□□□ -1.84
LMO3-229ENST00000543721 VCANP13611 3396 aa3.57□□□□□ -1.84
LMO3-229ENST00000543721 IGKV2-28A0A075B6P5 120 aa3.56□□□□□ -1.84
LMO3-229ENST00000543721 LY6G6DO95868 133 aa3.56□□□□□ -1.84
LMO3-229ENST00000543721 IGKV2D-28P01615 120 aa3.56□□□□□ -1.84
LMO3-229ENST00000543721 FHL2Q14192 279 aa3.56□□□□□ -1.84
LMO3-229ENST00000543721 CYSTM1Q9H1C7 97 aa3.56□□□□□ -1.84
LMO3-229ENST00000543721 TRIOO75962 3097 aa3.56□□□□□ -1.84
LMO3-229ENST00000543721 TRBV6-4A0A1B0GX49 114 aa3.56□□□□□ -1.84
LMO3-229ENST00000543721 K7EQD1 137 aa3.56□□□□□ -1.84
LMO3-229ENST00000543721 PAX4O43316 350 aa3.56□□□□□ -1.84
LMO3-229ENST00000543721 PDE6GP18545 87 aa3.56□□□□□ -1.84
LMO3-229ENST00000543721 CCL18P55774 89 aa3.56□□□□□ -1.84
LMO3-229ENST00000543721 ADORA2A-AS1P86434 159 aa3.56□□□□□ -1.84
LMO3-229ENST00000543721 NCR3O14931 201 aa3.56□□□□□ -1.84
LMO3-229ENST00000543721 OXTP01178 125 aa3.56□□□□□ -1.84
LMO3-229ENST00000543721 DEFB131AP59861 70 aa3.56□□□□□ -1.84
LMO3-229ENST00000543721 BLCAPP62952 87 aa3.56□□□□□ -1.84
LMO3-229ENST00000543721 C20orf197Q8N268 126 aa3.56□□□□□ -1.84
LMO3-229ENST00000543721 C11orf72Q8NBR9 251 aa3.56□□□□□ -1.84
LMO3-229ENST00000543721 C10orf105Q8TEF2 133 aa3.56□□□□□ -1.84
LMO3-229ENST00000543721 BRD3OSQ6XYD6 125 aa3.55□□□□□ -1.84
LMO3-229ENST00000543721 CACNA1AO00555 2505 aa3.55□□□□□ -1.84
LMO3-229ENST00000543721 NBEAQ8NFP9 2946 aa3.55□□□□□ -1.84
LMO3-229ENST00000543721 SEC61GP60059 68 aa3.55□□□□□ -1.84
LMO3-229ENST00000543721 KLKP1Q107X0 134 aa3.55□□□□□ -1.84
LMO3-229ENST00000543721 DEFB123Q8N688 67 aa3.55□□□□□ -1.84
LMO3-229ENST00000543721 TRAV23DV6A0A075B6W5 121 aa3.55□□□□□ -1.84
LMO3-229ENST00000543721 EDN2P20800 178 aa3.55□□□□□ -1.84
LMO3-229ENST00000543721 UBE2E2Q96LR5 201 aa3.55□□□□□ -1.84
LMO3-229ENST00000543721 TOMM7Q9P0U1 55 aa3.55□□□□□ -1.84
LMO3-229ENST00000543721 FRYQ5TBA9 3013 aa3.54□□□□□ -1.84
LMO3-229ENST00000543721 SPEGQ15772 3267 aa3.54□□□□□ -1.84
LMO3-229ENST00000543721 DNAH3Q8TD57 4116 aa3.54□□□□□ -1.84
LMO3-229ENST00000543721 ENHOQ6UWT2 76 aa3.54□□□□□ -1.84
LMO3-229ENST00000543721 ACACAQ13085 2346 aa3.54□□□□□ -1.84
LMO3-229ENST00000543721 MED13LQ71F56 2210 aa3.54□□□□□ -1.84
LMO3-229ENST00000543721 SPTBN5Q9NRC6 3674 aaKnown RBP3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms