RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 PTPN13Q12923 2485 aa8.89□□□□□ -0.99
NPC1-202ENST00000540608 NDUFA1O15239 70 aa8.88□□□□□ -0.99
NPC1-202ENST00000540608 ABCA12Q86UK0 2595 aa8.88□□□□□ -0.99
NPC1-202ENST00000540608 Q6ZSV7 163 aa8.88□□□□□ -0.99
NPC1-202ENST00000540608 UBE2WQ96B02 151 aa8.88□□□□□ -0.99
NPC1-202ENST00000540608 TMEM101Q96IK0 257 aa8.88□□□□□ -0.99
NPC1-202ENST00000540608 TRAV8-4A0A0B4J246 113 aa8.87□□□□□ -0.99
NPC1-202ENST00000540608 H3BT86 120 aa8.87□□□□□ -0.99
NPC1-202ENST00000540608 SNCGO76070 127 aa8.87□□□□□ -0.99
NPC1-202ENST00000540608 INSP01308 110 aa8.87□□□□□ -0.99
NPC1-202ENST00000540608 HIST2H2BDQ6DRA6 164 aa8.86□□□□□ -0.99
NPC1-202ENST00000540608 Q8N2B8 174 aa8.86□□□□□ -0.99
NPC1-202ENST00000540608 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.86□□□□□ -0.99
NPC1-202ENST00000540608 ANAPC13Q9BS18 74 aa8.86□□□□□ -0.99
NPC1-202ENST00000540608 ZNF469Q96JG9 3925 aaPredicted RBP8.86□□□□□ -0.99
NPC1-202ENST00000540608 LST1O00453 97 aa8.86□□□□□ -0.99
NPC1-202ENST00000540608 GAGE2BQ13066 116 aa8.86□□□□□ -0.99
NPC1-202ENST00000540608 CIRBPQ14011 172 aaKnown RBP8.86□□□□□ -0.99
NPC1-202ENST00000540608 GAGE2EQ4V326 116 aa8.86□□□□□ -0.99
NPC1-202ENST00000540608 DGAT2L7PQ6IED9 249 aa8.86□□□□□ -0.99
NPC1-202ENST00000540608 GAGE2DQ9UEU5 116 aa8.86□□□□□ -0.99
NPC1-202ENST00000540608 COX6A2Q02221 97 aa8.85□□□□□ -0.99
NPC1-202ENST00000540608 DEFB114Q30KQ6 69 aa8.85□□□□□ -0.99
NPC1-202ENST00000540608 DYNLRB2Q8TF09 96 aa8.85□□□□□ -0.99
NPC1-202ENST00000540608 C4orf3Q8WVX3 66 aa8.85□□□□□ -0.99
NPC1-202ENST00000540608 CLEC2BQ92478 149 aa8.85□□□□□ -0.99
NPC1-202ENST00000540608 NAV2Q8IVL1 2488 aa8.85□□□□□ -0.99
NPC1-202ENST00000540608 IGHV3OR16-12A0A075B7B8 117 aa8.84□□□□□ -0.99
NPC1-202ENST00000540608 TRAV4A0A0B4J268 109 aa8.84□□□□□ -0.99
NPC1-202ENST00000540608 CRLF1O75462 422 aa8.84□□□□□ -0.99
NPC1-202ENST00000540608 DAND5Q8N907 189 aa8.84□□□□□ -0.99
NPC1-202ENST00000540608 CLUHP3Q96NS8 147 aa8.84□□□□□ -0.99
NPC1-202ENST00000540608 IGLV5-39A0A0G2JS06 123 aa8.84□□□□□ -0.99
NPC1-202ENST00000540608 PLA2G2AP14555 144 aa8.84□□□□□ -0.99
NPC1-202ENST00000540608 HERVK_113P63121 156 aa8.84□□□□□ -0.99
NPC1-202ENST00000540608 CITED2Q99967 270 aaPredicted RBP8.84□□□□□ -0.99
NPC1-202ENST00000540608 LINC00242Q5T6M2 205 aa8.84□□□□□ -1
NPC1-202ENST00000540608 Q6Q795 121 aa8.84□□□□□ -1
NPC1-202ENST00000540608 FAM19A3Q7Z5A8 133 aa8.84□□□□□ -1
NPC1-202ENST00000540608 MYO9AB2RTY4 2548 aa8.83□□□□□ -1
NPC1-202ENST00000540608 DEFB121Q5J5C9 76 aa8.83□□□□□ -1
NPC1-202ENST00000540608 LINC00308Q8TCZ7 52 aa8.83□□□□□ -1
NPC1-202ENST00000540608 Q9H8V8 135 aa8.83□□□□□ -1
NPC1-202ENST00000540608 DEFB113Q30KQ7 82 aa8.82□□□□□ -1
NPC1-202ENST00000540608 NHLRC4P0CG21 123 aaPredicted RBP8.82□□□□□ -1
NPC1-202ENST00000540608 KHDC1LQ5JSQ8 128 aa8.82□□□□□ -1
NPC1-202ENST00000540608 C15orf53Q8NAA6 179 aa8.82□□□□□ -1
NPC1-202ENST00000540608 XCL2Q9UBD3 114 aa8.82□□□□□ -1
NPC1-202ENST00000540608 CSDC2Q9Y534 153 aaKnown RBP8.82□□□□□ -1
NPC1-202ENST00000540608 NDUFV3P56181 108 aaKnown RBP8.81□□□□□ -1
NPC1-202ENST00000540608 Q96MF0 132 aa8.81□□□□□ -1
NPC1-202ENST00000540608 J3QKU1 62 aa8.81□□□□□ -1
NPC1-202ENST00000540608 MRPL23Q16540 153 aaKnown RBP8.81□□□□□ -1
NPC1-202ENST00000540608 IL17DQ8TAD2 202 aa8.81□□□□□ -1
NPC1-202ENST00000540608 COPS9Q8WXC6 57 aa8.81□□□□□ -1
NPC1-202ENST00000540608 AKAP9Q99996 3911 aa8.81□□□□□ -1
NPC1-202ENST00000540608 FAM240AA0A1B0GVK7 77 aa8.8□□□□□ -1
NPC1-202ENST00000540608 LINC00694P0DN24 101 aa8.8□□□□□ -1
NPC1-202ENST00000540608 C1orf158Q8N1D5 194 aa8.8□□□□□ -1
NPC1-202ENST00000540608 APCP25054 2843 aa8.8□□□□□ -1
NPC1-202ENST00000540608 TRBV10-1A0A0K0K1A3 114 aa8.8□□□□□ -1
NPC1-202ENST00000540608 SMIM1B2RUZ4 78 aa8.8□□□□□ -1
NPC1-202ENST00000540608 TTC32Q5I0X7 151 aa8.8□□□□□ -1
NPC1-202ENST00000540608 TLN2Q9Y4G6 2542 aa8.8□□□□□ -1
NPC1-202ENST00000540608 CHD6Q8TD26 2715 aa8.79□□□□□ -1
NPC1-202ENST00000540608 TRGV1A0A0A0MS02 117 aa8.79□□□□□ -1
NPC1-202ENST00000540608 RPL36AP83881 106 aaKnown RBP8.79□□□□□ -1
NPC1-202ENST00000540608 GAGE5Q13069 117 aa8.79□□□□□ -1
NPC1-202ENST00000540608 GAGE6Q13070 117 aa8.79□□□□□ -1
NPC1-202ENST00000540608 RPL36ALQ969Q0 106 aaKnown RBP8.79□□□□□ -1
NPC1-202ENST00000540608 CUBNO60494 3623 aa8.79□□□□□ -1
NPC1-202ENST00000540608 DAZ2Q13117 558 aaKnown RBP8.79□□□□□ -1
NPC1-202ENST00000540608 ODF3L2Q3SX64 289 aa8.79□□□□□ -1
NPC1-202ENST00000540608 NTM-AS1Q6ZSK4 140 aa8.79□□□□□ -1
NPC1-202ENST00000540608 DAZ4Q86SG3 579 aaKnown RBP8.79□□□□□ -1
NPC1-202ENST00000540608 STHQ8IWL8 128 aa8.79□□□□□ -1
NPC1-202ENST00000540608 ZNF625Q96I27 306 aaPredicted RBP8.79□□□□□ -1
NPC1-202ENST00000540608 DAZ3Q9NR90 486 aaKnown RBP8.79□□□□□ -1
NPC1-202ENST00000540608 NDUFA7O95182 113 aa8.78□□□□□ -1
NPC1-202ENST00000540608 EPG5Q9HCE0 2579 aa8.78□□□□□ -1
NPC1-202ENST00000540608 TRAV25A0A0B4J276 109 aa8.78□□□□□ -1
NPC1-202ENST00000540608 K7EQD1 137 aa8.78□□□□□ -1
NPC1-202ENST00000540608 COX7A2LO14548 114 aa8.78□□□□□ -1
NPC1-202ENST00000540608 SOSTDC1Q6X4U4 206 aa8.78□□□□□ -1
NPC1-202ENST00000540608 KRTAP1-3Q8IUG1 177 aa8.78□□□□□ -1
NPC1-202ENST00000540608 NF1P21359 2839 aa8.78□□□□□ -1
NPC1-202ENST00000540608 TRAV13-1A0A0B4J241 112 aa8.78□□□□□ -1
NPC1-202ENST00000540608 SHISA2Q6UWI4 295 aa8.78□□□□□ -1
NPC1-202ENST00000540608 CDC42SE2Q9NRR3 84 aa8.78□□□□□ -1
NPC1-202ENST00000540608 A0A0U1RRA0 63 aa8.77□□□□□ -1.01
NPC1-202ENST00000540608 NBPF19A0A087WUL8 3843 aa8.77□□□□□ -1.01
NPC1-202ENST00000540608 F5H768 121 aa8.77□□□□□ -1.01
NPC1-202ENST00000540608 PRIMA1Q86XR5 153 aa8.77□□□□□ -1.01
NPC1-202ENST00000540608 LRRC75A-AS1Q8N1F1 130 aa8.77□□□□□ -1.01
NPC1-202ENST00000540608 HERV-K104P63124 156 aa8.76□□□□□ -1.01
NPC1-202ENST00000540608 ITPR3Q14573 2671 aa8.76□□□□□ -1.01
NPC1-202ENST00000540608 Q6ZTI0 123 aa8.76□□□□□ -1.01
NPC1-202ENST00000540608 PPDPFQ9H3Y8 114 aa8.76□□□□□ -1.01
NPC1-202ENST00000540608 MEIG1Q5JSS6 88 aa8.75□□□□□ -1.01
NPC1-202ENST00000540608 SONP18583 2426 aaKnown RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms